Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0405
         (799 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6UV17 Cluster: Endonuclease and reverse transcriptase-...    45   0.002
UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: L...    39   0.17 
UniRef50_Q6BGR0 Cluster: Similar to CA1634|IPF10179 Candida albi...    36   1.2  
UniRef50_Q7RBS2 Cluster: Putative uncharacterized protein PY0606...    35   2.7  
UniRef50_A1SQA8 Cluster: Protein kinase; n=1; Nocardioides sp. J...    33   8.3  
UniRef50_Q8ILR5 Cluster: Putative uncharacterized protein; n=1; ...    33   8.3  

>UniRef50_Q6UV17 Cluster: Endonuclease and reverse transcriptase-like
            protein; n=25; Arthropoda|Rep: Endonuclease and reverse
            transcriptase-like protein - Bombyx mori (Silk moth)
          Length = 986

 Score = 45.2 bits (102), Expect = 0.002
 Identities = 18/19 (94%), Positives = 19/19 (100%)
 Frame = +3

Query: 630  FPERYDMSFFKRGLWRVLN 686
            FPERYDMSFFKRGLWRVL+
Sbjct: 950  FPERYDMSFFKRGLWRVLS 968



 Score = 35.5 bits (78), Expect = 1.6
 Identities = 16/19 (84%), Positives = 17/19 (89%)
 Frame = +1

Query: 685  TGRQRLGSALNIAEVHGRR 741
            +GRQRLGSA  IAEVHGRR
Sbjct: 968  SGRQRLGSAPGIAEVHGRR 986


>UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: Like
           moricin - Manduca sexta (Tobacco hawkmoth) (Tobacco
           hornworm)
          Length = 248

 Score = 38.7 bits (86), Expect = 0.17
 Identities = 17/23 (73%), Positives = 18/23 (78%)
 Frame = +2

Query: 731 MGDGNHSPSGGLYARLPTKAIKK 799
           MGDGNHSPSG  YA LPT+A  K
Sbjct: 1   MGDGNHSPSGRPYASLPTRAKMK 23


>UniRef50_Q6BGR0 Cluster: Similar to CA1634|IPF10179 Candida
           albicans IPF10179; n=2; Saccharomycetaceae|Rep: Similar
           to CA1634|IPF10179 Candida albicans IPF10179 -
           Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
          Length = 308

 Score = 35.9 bits (79), Expect = 1.2
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
 Frame = -3

Query: 311 DYLSTLIYTNIIKRKDLFVWVE*AP--KLLNRFENFFHCLEATLFPSDIGYNLF*K 150
           DY+++L Y   ++  D+  W E A   + +  +E   HCL+  L      YN+F K
Sbjct: 138 DYIASLNYYLDLQPSDVITWAELAEEYRTIGHYEKGIHCLQEILLQEPYAYNIFYK 193


>UniRef50_Q7RBS2 Cluster: Putative uncharacterized protein PY06067;
           n=3; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY06067 - Plasmodium yoelii yoelii
          Length = 481

 Score = 34.7 bits (76), Expect = 2.7
 Identities = 19/66 (28%), Positives = 32/66 (48%)
 Frame = +3

Query: 411 RKTRDCLLKYFRIYVNNL*LRCSQTKLYYFMTSRLRIYCMVRKIKAVRIEKGRLVNIISL 590
           +K++   L    I++NN  + C   K YY   S +    +++  K +  +   +VNI SL
Sbjct: 49  KKSKKLNLSTQDIFINNNFINCMINKKYYIDNSNINFNNLMKSHKYINCKSKYIVNIASL 108

Query: 591 SKESFK 608
            K  FK
Sbjct: 109 HKWFFK 114


>UniRef50_A1SQA8 Cluster: Protein kinase; n=1; Nocardioides sp.
           JS614|Rep: Protein kinase - Nocardioides sp. (strain
           BAA-499 / JS614)
          Length = 488

 Score = 33.1 bits (72), Expect = 8.3
 Identities = 19/57 (33%), Positives = 25/57 (43%)
 Frame = -2

Query: 789 AFVGRRAYSPPDGEWLPSPMDFSNVKGRAKPLPAGLILSTSLV*RRTCHSARESIAG 619
           A +G  A + P G WLP   D +    R  PLP    L+  +  RRT      +I G
Sbjct: 268 AALGADADADPSGPWLPLDPDLTRPGARPSPLPPSRPLADPVPPRRTGRRVLAAIVG 324


>UniRef50_Q8ILR5 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 3597

 Score = 33.1 bits (72), Expect = 8.3
 Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
 Frame = -3

Query: 347 FTKNNVCL-CLP*DYLSTLIYTNIIKRKDLFVWVE*APKLLNRFENFFHCLEATLFPSDI 171
           F  N+ CL C+P  Y++   + N+I  K L       PK LN   +F   ++     +  
Sbjct: 554 FNYNDTCLLCVPSSYITNNCFCNLIHSKGLGEKTNDVPKKLNMMPHFSSIIDVYGNKNID 613

Query: 170 GYNLF 156
           GYN F
Sbjct: 614 GYNNF 618


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 736,013,815
Number of Sequences: 1657284
Number of extensions: 14294464
Number of successful extensions: 27883
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 27149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27879
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 68319938570
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)