Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0404
         (784 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0591 - 4366400-4366558,4366782-4366985,4367078-4367152,436...    32   0.59 
10_02_0172 - 6162692-6163066                                           29   5.5  

>03_01_0591 -
           4366400-4366558,4366782-4366985,4367078-4367152,
           4367240-4367394,4367476-4367596,4367720-4367794,
           4369435-4369572,4369655-4369765,4369844-4369948,
           4370327-4370405,4370561-4370622,4370698-4370763,
           4370840-4371024,4371095-4371173
          Length = 537

 Score = 31.9 bits (69), Expect = 0.59
 Identities = 16/30 (53%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = +3

Query: 339 FGKKINCSLFACLSEVLTTQN-GFIRKTRD 425
           FG+ I C LF C SE LTTQ   F++  RD
Sbjct: 483 FGQIIRCYLFTCNSEFLTTQVWSFVKGCRD 512


>10_02_0172 - 6162692-6163066
          Length = 124

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 6/58 (10%)
 Frame = +3

Query: 627 CFPERYDMSFFKRGLWR---VLSGRQRLGSALSIA---EVHGRR*PLTIRWAVCSSAY 782
           C   R+D+ F  +G WR     +   RL  A+  A    V  RR  L   WA C S Y
Sbjct: 5   CSSSRFDLVFEMKGRWRREGAAAMAMRLNEAVWHATGGSVWRRRQELAFLWADCESGY 62


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,309,341
Number of Sequences: 37544
Number of extensions: 345345
Number of successful extensions: 638
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 626
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 637
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2103658836
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)