Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0403
         (767 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-9|CAB02098.1|  312|Caenorhabditis elegans Hypothetical pr...   263   1e-70
U41264-4|AAA82424.1|  220|Caenorhabditis elegans Hypothetical pr...    55   5e-08
Z81117-4|CAB03319.1|  249|Caenorhabditis elegans Hypothetical pr...    29   3.6  
U53154-2|AAC25856.1|  358|Caenorhabditis elegans Hypothetical pr...    28   6.4  
U41559-4|AAC24257.1|  413|Caenorhabditis elegans Hypothetical pr...    28   6.4  
AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical ...    28   6.4  
AC024849-3|AAK68547.1|  327|Caenorhabditis elegans Hypothetical ...    28   8.4  

>Z79754-9|CAB02098.1|  312|Caenorhabditis elegans Hypothetical
           protein F25H2.10 protein.
          Length = 312

 Score =  263 bits (644), Expect = 1e-70
 Identities = 120/175 (68%), Positives = 148/175 (84%)
 Frame = +1

Query: 136 PKMFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKG 315
           PK  +VG DNVGS+QMQ+IR ++RG + +LMGKNTM+RKA++ HL  NP+LEKLLPHI  
Sbjct: 25  PKCLLVGVDNVGSKQMQEIRQAMRGHAEILMGKNTMIRKALRGHLGKNPSLEKLLPHIVE 84

Query: 316 NVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIP 495
           NVGFVFT+ DL E+R KLLEN+  APA+ GAIAP  V +P  NTG+GPEKTSFFQAL IP
Sbjct: 85  NVGFVFTKEDLGEIRSKLLENRKGAPAKAGAIAPCDVKLPPQNTGMGPEKTSFFQALQIP 144

Query: 496 TKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIF 660
           TKI++GTIEI+NDVH++K GDKVGASE+ LLNML ++PFSYGLVV+QVYD GT++
Sbjct: 145 TKIARGTIEILNDVHLIKEGDKVGASESALLNMLGVTPFSYGLVVRQVYDDGTLY 199



 Score = 49.6 bits (113), Expect = 2e-06
 Identities = 17/27 (62%), Positives = 24/27 (88%)
 Frame = +2

Query: 65  MGREDKATWKSNYFVKIIQLLDEYPKC 145
           M RED++TWK+NYF K+++L +EYPKC
Sbjct: 1   MVREDRSTWKANYFTKLVELFEEYPKC 27



 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 18/36 (50%), Positives = 29/36 (80%)
 Frame = +2

Query: 659 FAPEILDIKSEDLRAKFQAGVANGAALSLAIGYPTI 766
           + PE+LD+ +E+LR +F +GV N A++SLA+ YPT+
Sbjct: 199 YTPEVLDMTTEELRKRFLSGVRNVASVSLAVNYPTL 234


>U41264-4|AAA82424.1|  220|Caenorhabditis elegans Hypothetical
           protein F10E7.5 protein.
          Length = 220

 Score = 55.2 bits (127), Expect = 5e-08
 Identities = 42/167 (25%), Positives = 71/167 (42%), Gaps = 3/167 (1%)
 Frame = +1

Query: 142 MFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPA--LEKLLPHIKG 315
           +FI    N+ S +   IR   + +S    GKN ++  A+     +  A  L K    +KG
Sbjct: 40  LFIFTIANMRSTRFIAIRQKYKENSRFFFGKNNVISIALGKQKSDEYANQLHKASAILKG 99

Query: 316 NVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIP-AHNTGLGPEKTSFFQALSI 492
             G +FT     EV  +  E   +  AR G +A  +VV+P    +          + L +
Sbjct: 100 QCGLMFTNMSKKEVEAEFSEASEEDYARVGDVATETVVLPEGPISQFAFSMEPQLRKLGL 159

Query: 493 PTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVK 633
           PTK+ KG I +     + K G+ +   +A +L    +    + L+ K
Sbjct: 160 PTKLDKGVITLYQQFEVCKEGEPLTVEQAKILKHFEVKMSQFRLIFK 206


>Z81117-4|CAB03319.1|  249|Caenorhabditis elegans Hypothetical
           protein T06E6.10 protein.
          Length = 249

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 13/56 (23%), Positives = 21/56 (37%)
 Frame = +2

Query: 212 PVSCSWEKTQ*CAKPSKTTWTTIQPSRNCCHTSRATLASCSPAETSLRSVTNCWRT 379
           P  C+  +   C      T   ++P+  C H +  T   CSP +        C+ T
Sbjct: 109 PAGCAMVRPSGCMDSPTMTGCELKPT--CIHVNACTTTKCSPGKKCALHTVQCFTT 162


>U53154-2|AAC25856.1|  358|Caenorhabditis elegans Hypothetical
           protein C33G8.12 protein.
          Length = 358

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 15/38 (39%), Positives = 25/38 (65%)
 Frame = +2

Query: 20  LVLKFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDE 133
           L+ K   S ++ +SR+ +EDK +  SN+++K  QLL E
Sbjct: 156 LLWKLGESIFSDVSRLSKEDKNSMISNFYIK-WQLLME 192


>U41559-4|AAC24257.1|  413|Caenorhabditis elegans Hypothetical
           protein C26B2.1 protein.
          Length = 413

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
 Frame = +1

Query: 475 FQALSIPTKISKGTIEIINDVHILKPGD--KVGASEATLLNMLNISPFSYGLVVKQVYDS 648
           F   +   KIS    + + D+ + +P D  KVG +    L++ N+S  +  L +     +
Sbjct: 251 FGVTTFKFKISSFARQFVPDIRMSRPVDDLKVGETSHVFLSITNLSSSAMDLTIAPQSGN 310

Query: 649 GTIFCT 666
           G I C+
Sbjct: 311 GFIQCS 316


>AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical
           protein Y46B2A.3 protein.
          Length = 1145

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -1

Query: 428 TTDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVNTKPT 318
           TT      P  AG WT+ +N ++R  TR P    +PT
Sbjct: 192 TTRGFTQRPTAAG-WTIRANGITRGQTRVPGTTREPT 227


>AC024849-3|AAK68547.1|  327|Caenorhabditis elegans Hypothetical
           protein Y67D8B.2 protein.
          Length = 327

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 17/50 (34%), Positives = 24/50 (48%)
 Frame = +1

Query: 367 LLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGT 516
           +L   +Q  A   A+  L+  +P   TGL P +   FQAL  P  I+  T
Sbjct: 42  VLNRYMQLEAYCDAVDDLTGALP--KTGLAPNEPDLFQALFFPRSIAPRT 89


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,716,756
Number of Sequences: 27780
Number of extensions: 413180
Number of successful extensions: 1223
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1223
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)