Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0402
         (566 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z35639-1|CAA84693.1| 1792|Caenorhabditis elegans Hypothetical pr...    29   2.3  
AF098986-1|AAC67425.1|  747|Caenorhabditis elegans T box family ...    28   4.1  
Z83216-7|CAB05676.2|  320|Caenorhabditis elegans Hypothetical pr...    27   7.1  
U41039-3|AAK68627.2|  537|Caenorhabditis elegans Synapse defecti...    27   7.1  
AL117199-4|CAN99722.1| 1342|Caenorhabditis elegans Hypothetical ...    27   9.4  
AL117195-32|CAB60770.3| 1342|Caenorhabditis elegans Hypothetical...    27   9.4  

>Z35639-1|CAA84693.1| 1792|Caenorhabditis elegans Hypothetical
           protein D2045.2 protein.
          Length = 1792

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 19/71 (26%), Positives = 33/71 (46%)
 Frame = -1

Query: 227 REQRWSCSKPAPERRRRIGSLRNSL*VYVNSKADVKTQAALY*SLDVHYQNVINSDLFLF 48
           R+   S  KPAP     IGSL +SL       +  +T  A    +D  Y N+++ +   +
Sbjct: 508 RQLEKSLQKPAPPTSVIIGSLWSSLQKDYRRNSSSETDGAA--RVDPSYNNLVHQNASRY 565

Query: 47  IYTNSRGLLLD 15
           +Y     +++D
Sbjct: 566 LYAVFESIVMD 576


>AF098986-1|AAC67425.1|  747|Caenorhabditis elegans T box family
           protein 31 protein.
          Length = 747

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = -3

Query: 408 YILKLTSRLNNTSIYGSRFKDHFPIALAEPRTSIAGPALTMP 283
           ++L L+  L   S Y    K HFP       TS+ GPA+ +P
Sbjct: 612 HLLNLSHHLCRFSEYNLFVKAHFPRGSYGSLTSMTGPAVEIP 653


>Z83216-7|CAB05676.2|  320|Caenorhabditis elegans Hypothetical
           protein C08F11.9 protein.
          Length = 320

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = -1

Query: 149 VYVNSKADVKTQAALY*SLDVHYQNVINSDLFLFIY 42
           VYVN K     + AL   +  H+  +I    F+F+Y
Sbjct: 43  VYVNKKNQNSDKTALLFPMTNHFYEMIRKTYFIFVY 78


>U41039-3|AAK68627.2|  537|Caenorhabditis elegans Synapse defective
           protein 9, isoformc protein.
          Length = 537

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = -1

Query: 203 KPAPERRRRIGSLRNSL*VYVNSKADVKTQAA 108
           KPAPE+     SL N L V  N+  ++K Q A
Sbjct: 407 KPAPEQPVNASSLHNELRVISNAICELKAQQA 438


>AL117199-4|CAN99722.1| 1342|Caenorhabditis elegans Hypothetical
            protein Y57A10A.1 protein.
          Length = 1342

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +1

Query: 244  LQEN*KNGQEHP*RHRQSGPGDRGPRFG*SYRK 342
            L EN KN    P RH+Q+G  D+  + G S  K
Sbjct: 1065 LAENEKNAASPPTRHQQNGSKDKNEKPGCSSTK 1097


>AL117195-32|CAB60770.3| 1342|Caenorhabditis elegans Hypothetical
            protein Y57A10A.1 protein.
          Length = 1342

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +1

Query: 244  LQEN*KNGQEHP*RHRQSGPGDRGPRFG*SYRK 342
            L EN KN    P RH+Q+G  D+  + G S  K
Sbjct: 1065 LAENEKNAASPPTRHQQNGSKDKNEKPGCSSTK 1097


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,542,417
Number of Sequences: 27780
Number of extensions: 190654
Number of successful extensions: 423
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 418
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 423
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1176726318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)