Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0401
         (531 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    29   0.097
AY146749-1|AAO12064.1|  336|Anopheles gambiae odorant-binding pr...    28   0.22 
AJ618917-1|CAF01996.1|  199|Anopheles gambiae putative odorant-b...    23   6.4  
AJ439060-15|CAD27766.1|   56|Anopheles gambiae putative ribosoma...    23   6.4  

>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 29.1 bits (62), Expect = 0.097
 Identities = 18/55 (32%), Positives = 23/55 (41%)
 Frame = +1

Query: 292 GTVVRTCLDVNPNDSQHTCRVVELAYNTAIADSAKVKSCAECNKDNCNGAGSICF 456
           G   R C  ++  D     R +   YN A    A  K+  EC   NCNG  + CF
Sbjct: 299 GQRTRVCKCMHFTDGPDCDRCLPF-YNDAPWGRATSKNVHECKPCNCNGYSTKCF 352


>AY146749-1|AAO12064.1|  336|Anopheles gambiae odorant-binding
           protein AgamOBP38 protein.
          Length = 336

 Score = 27.9 bits (59), Expect = 0.22
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
 Frame = +3

Query: 195 LQYALPAQHSAWRSLEQRYGSS-YILAQDRHE---ERNCCPYL 311
           L Y  PA    W  L+Q YGSS   LA++  +    R+C P++
Sbjct: 255 LCYGWPAFGELWEVLKQEYGSSDDALAEESEQVVVRRSCTPWM 297


>AJ618917-1|CAF01996.1|  199|Anopheles gambiae putative
           odorant-binding protein OBPjj1 protein.
          Length = 199

 Score = 23.0 bits (47), Expect = 6.4
 Identities = 17/72 (23%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
 Frame = +1

Query: 37  KSVAFAFAVLLTLFETGYCIKCYQCNSEQDKNCGDPFKSAKPPLECNTQDSINFNTLY-L 213
           K+  F    +  L +      C++     DK+  D   ++ P  EC ++  +N   +Y  
Sbjct: 31  KTDPFTCCTIPKLLDVTIVSSCFE-KFPIDKDAADKGAASMPKTECMSECILNSTGIYNR 89

Query: 214 RNILPGEVLNSV 249
           R  +  + LNSV
Sbjct: 90  RGDVDEKKLNSV 101


>AJ439060-15|CAD27766.1|   56|Anopheles gambiae putative ribosomal
           protein protein.
          Length = 56

 Score = 23.0 bits (47), Expect = 6.4
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -3

Query: 334 NRWG*HPSKYGQQFRSS*RSCAS 266
           N W  HP KYGQ  R   R+C++
Sbjct: 5   NLWYSHPRKYGQGSRFW-RACSN 26


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 545,363
Number of Sequences: 2352
Number of extensions: 10634
Number of successful extensions: 16
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49051644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)