Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0401
         (531 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016427-6|AAY86198.1|  177|Caenorhabditis elegans Hypothetical ...    33   0.17 
AL032655-3|CAB63412.1|  131|Caenorhabditis elegans Hypothetical ...    29   2.1  
AF016685-7|AAG24151.1|  341|Caenorhabditis elegans Seven tm rece...    29   2.1  
Z78417-9|CAI70407.1|  700|Caenorhabditis elegans Hypothetical pr...    29   2.7  
U88168-7|AAC24396.2|  132|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z81113-8|CAO82064.1|  138|Caenorhabditis elegans Hypothetical pr...    28   3.6  
U80455-5|AAB37883.1|  216|Caenorhabditis elegans Hypothetical pr...    28   4.8  
Z68749-7|CAA92962.2|  728|Caenorhabditis elegans Hypothetical pr...    27   6.3  
Z68219-9|CAA92483.2|  728|Caenorhabditis elegans Hypothetical pr...    27   6.3  
Z50176-3|CAA90540.1|  196|Caenorhabditis elegans Hypothetical pr...    27   6.3  
Z29094-2|CAA82339.3|  590|Caenorhabditis elegans Hypothetical pr...    27   6.3  
AY851363-1|AAW34127.1|  728|Caenorhabditis elegans fibulin-1D sp...    27   6.3  
Z81493-1|CAB04039.1|  178|Caenorhabditis elegans Hypothetical pr...    27   8.4  

>AF016427-6|AAY86198.1|  177|Caenorhabditis elegans Hypothetical
           protein F32D1.11 protein.
          Length = 177

 Score = 32.7 bits (71), Expect = 0.17
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +1

Query: 58  AVLLTLFETGYCIKCYQCNSEQDKN 132
           AV LT+ + G+  +CY CN E  KN
Sbjct: 6   AVTLTILQLGHAFECYTCNEELTKN 30


>AL032655-3|CAB63412.1|  131|Caenorhabditis elegans Hypothetical
           protein Y6B3B.7 protein.
          Length = 131

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = +1

Query: 55  FAVLLTLFETGYCIKCYQCNSEQDKNCGD 141
           F V L  FE    I CY C+S+Q   C D
Sbjct: 13  FLVFLLCFEATIAITCYDCHSDQG-TCND 40


>AF016685-7|AAG24151.1|  341|Caenorhabditis elegans Seven tm
           receptor protein 86 protein.
          Length = 341

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +1

Query: 304 RTCLDVNPNDSQHTCRVVELAYNTAIA 384
           R C+ +N ND Q +CR V+L     IA
Sbjct: 221 RCCVKLNKNDKQTSCRTVDLQKQLMIA 247


>Z78417-9|CAI70407.1|  700|Caenorhabditis elegans Hypothetical
           protein C35C5.11 protein.
          Length = 700

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 5/55 (9%)
 Frame = +2

Query: 83  QAIASSATNVTVNRIRTAGTRSRAPNP-----H*NATPRIRLTSIRSTCATFCLA 232
           Q++ + A    VN +R A  +   PNP     H    P I  TS +      CL+
Sbjct: 450 QSLLAMANPTVVNVLRAAAAKISHPNPKTFLPHKTIIPHIHFTSFQQVAVIICLS 504


>U88168-7|AAC24396.2|  132|Caenorhabditis elegans Hypothetical
           protein K11H12.6 protein.
          Length = 132

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +1

Query: 55  FAVLLTLFETGYCIKCYQCNSEQDKNCGDPFKS 153
           F V   LF     + CY CNS++  +C D +++
Sbjct: 4   FIVFAPLFAVSAPLNCYICNSKKQPDCIDNYQA 36


>Z81113-8|CAO82064.1|  138|Caenorhabditis elegans Hypothetical
           protein T03F6.9 protein.
          Length = 138

 Score = 28.3 bits (60), Expect = 3.6
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
 Frame = +1

Query: 400 KSCAE---CNKDNCNGAGSICFSLPLATFA 480
           + CA+   C KD CNGAG +     +A F+
Sbjct: 99  RGCADRFCCGKDKCNGAGKVSTIFVVAMFS 128


>U80455-5|AAB37883.1|  216|Caenorhabditis elegans Hypothetical
           protein T01D1.3 protein.
          Length = 216

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 16/59 (27%), Positives = 23/59 (38%)
 Frame = +1

Query: 289 SGTVVRTCLDVNPNDSQHTCRVVELAYNTAIADSAKVKSCAECNKDNCNGAGSICFSLP 465
           SG   R   +         C  +   Y   +   A  K   + +KD CN   +ICFS+P
Sbjct: 12  SGVFGRASREAEKKQDTVACGELRDEY-VRVCTGANTKRREQKDKDFCNAFENICFSIP 69


>Z68749-7|CAA92962.2|  728|Caenorhabditis elegans Hypothetical
           protein F56H11.1c protein.
          Length = 728

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 33/130 (25%), Positives = 51/130 (39%), Gaps = 3/130 (2%)
 Frame = +1

Query: 73  LFETGYCIKCYQCNSEQDKNCGDPFKSAKPPLEC-NTQDSINFNTLYLRNILPGEVLNSV 249
           LF+ G+C+   +CN     +CG       P  +C NTQ S   +    +    GE+ N +
Sbjct: 273 LFQHGHCVDVDECNL-GSHDCG-------PLYQCRNTQGSYRCDA---KKCGDGELQNPM 321

Query: 250 TGAPIYWHKIVMKSGTVVRT--CLDVNPNDSQHTCRVVELAYNTAIADSAKVKSCAECNK 423
           TG       I   +G   +   C D++   + H C   E   NT  +   + K     + 
Sbjct: 322 TGE---CTSITCPNGYYPKNGMCNDIDECVTGHNCGAGEECVNTPGSFRCQQKGNLCAHG 378

Query: 424 DNCNGAGSIC 453
              NGA   C
Sbjct: 379 YEVNGATGFC 388


>Z68219-9|CAA92483.2|  728|Caenorhabditis elegans Hypothetical
           protein F56H11.1c protein.
          Length = 728

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 33/130 (25%), Positives = 51/130 (39%), Gaps = 3/130 (2%)
 Frame = +1

Query: 73  LFETGYCIKCYQCNSEQDKNCGDPFKSAKPPLEC-NTQDSINFNTLYLRNILPGEVLNSV 249
           LF+ G+C+   +CN     +CG       P  +C NTQ S   +    +    GE+ N +
Sbjct: 273 LFQHGHCVDVDECNL-GSHDCG-------PLYQCRNTQGSYRCDA---KKCGDGELQNPM 321

Query: 250 TGAPIYWHKIVMKSGTVVRT--CLDVNPNDSQHTCRVVELAYNTAIADSAKVKSCAECNK 423
           TG       I   +G   +   C D++   + H C   E   NT  +   + K     + 
Sbjct: 322 TGE---CTSITCPNGYYPKNGMCNDIDECVTGHNCGAGEECVNTPGSFRCQQKGNLCAHG 378

Query: 424 DNCNGAGSIC 453
              NGA   C
Sbjct: 379 YEVNGATGFC 388


>Z50176-3|CAA90540.1|  196|Caenorhabditis elegans Hypothetical
           protein C09G1.3 protein.
          Length = 196

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 13/46 (28%), Positives = 21/46 (45%)
 Frame = +1

Query: 343 TCRVVELAYNTAIADSAKVKSCAECNKDNCNGAGSICFSLPLATFA 480
           +C+V++ A ++ +ADS K      C   N      +C    L  FA
Sbjct: 51  SCKVIDWAESSRVADSLKRGDLQVCTPSNILPRNVVCSGAELFQFA 96


>Z29094-2|CAA82339.3|  590|Caenorhabditis elegans Hypothetical
           protein C07A9.4 protein.
          Length = 590

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 7/47 (14%)
 Frame = +1

Query: 385 DSAKVKSCAECNKDNCNGAGSI-------CFSLPLATFALIATCFVF 504
           +S +V    +CN DNC G G +       C S P     LI T  ++
Sbjct: 60  NSTQVCEYVKCNDDNCEGGGYVLWTRYVECASSPAVRIILIITGVIY 106


>AY851363-1|AAW34127.1|  728|Caenorhabditis elegans fibulin-1D
           splice variant protein.
          Length = 728

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 33/130 (25%), Positives = 51/130 (39%), Gaps = 3/130 (2%)
 Frame = +1

Query: 73  LFETGYCIKCYQCNSEQDKNCGDPFKSAKPPLEC-NTQDSINFNTLYLRNILPGEVLNSV 249
           LF+ G+C+   +CN     +CG       P  +C NTQ S   +    +    GE+ N +
Sbjct: 273 LFQHGHCVDVDECNL-GSHDCG-------PLYQCRNTQGSYRCDA---KKCGDGELQNPM 321

Query: 250 TGAPIYWHKIVMKSGTVVRT--CLDVNPNDSQHTCRVVELAYNTAIADSAKVKSCAECNK 423
           TG       I   +G   +   C D++   + H C   E   NT  +   + K     + 
Sbjct: 322 TGE---CTSITCPNGYYPKNGMCNDIDECVTGHNCGAGEECVNTPGSFRCQQKGNLCAHG 378

Query: 424 DNCNGAGSIC 453
              NGA   C
Sbjct: 379 YEVNGATGFC 388


>Z81493-1|CAB04039.1|  178|Caenorhabditis elegans Hypothetical
           protein F01D5.1 protein.
          Length = 178

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
 Frame = +1

Query: 79  ETGYCIKCYQCNSEQDKNCGDPFKSAKPPL--ECNTQDSI 192
           + GYC KC+   SE++K C        P    +CN+ +++
Sbjct: 130 KNGYCNKCFYKCSEREKYCAKSCGFCTPGTCKDCNSLETL 169


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,779,909
Number of Sequences: 27780
Number of extensions: 240990
Number of successful extensions: 718
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 682
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 718
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1049512662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)