Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0401
         (531 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    23   1.5  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    21   7.9  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   7.9  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   7.9  

>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 201 YALPAQHSAWRSLEQRYGS 257
           Y L   H A++ L QRYG+
Sbjct: 74  YKLNKIHDAYKDLNQRYGA 92


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = +3

Query: 171 MQHPGFD*LQYALPAQHSAWRSLEQRYGSS 260
           M HPGF   +Y    +  A  +   RYG +
Sbjct: 197 MNHPGFADKEYRARRKFIAEIAFAYRYGDA 226


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +1

Query: 316 DVNPNDSQHTCRVVELAYNTAIAD 387
           ++N  +S HTCR     Y   + D
Sbjct: 15  ELNATNSPHTCRTKNGDYTKIMPD 38


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 8/27 (29%), Positives = 11/27 (40%)
 Frame = -2

Query: 347 QVCWESLGLTSKQVRTTVPLFMTILCQ 267
           Q CW     T  Q+R    +   I C+
Sbjct: 604 QCCWHCFNCTQYQIRDHKDVTQCISCR 630


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,945
Number of Sequences: 438
Number of extensions: 2997
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14968302
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)