Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0401
         (531 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g62700.1 68416.m07043 glutathione-conjugate transporter, puta...    29   2.0  
At1g59218.1 68414.m06674 disease resistance protein (CC-NBS-LRR ...    29   2.0  
At1g58602.1 68414.m06655 disease resistance protein (CC-NBS-LRR ...    29   2.0  
At5g60520.1 68418.m07589 late embryogenesis abundant protein-rel...    27   6.0  
At1g20970.1 68414.m02625 adhesin-related contains TIGRFAM TIGR01...    27   6.0  
At1g10000.1 68414.m01128 expressed protein                             27   6.0  
At5g60530.1 68418.m07590 late embryogenesis abundant protein-rel...    27   7.9  

>At3g62700.1 68416.m07043 glutathione-conjugate transporter, putative
            similar to glutathione-conjugate transporter AtMRP4
            GI:2959767 from [Arabidopsis thaliana]
          Length = 1539

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = -2

Query: 344  VCWESLGLTSKQVRTTVPLFMTILCQYIGAPVTLFKTSP-GRMLRR 210
            VC  +  +T   ++T    F  IL   + AP++ F T+P GR+L R
Sbjct: 1033 VCLRAFYVTHLGLKTAQIFFKQILNSLVHAPMSFFDTTPSGRILSR 1078


>At1g59218.1 68414.m06674 disease resistance protein (CC-NBS-LRR
           class), putative domain signature CC-NBS-LRR exists,
           suggestive of a disease resistance protein.
          Length = 1049

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 14/51 (27%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
 Frame = +3

Query: 228 WRSLEQRYGSSYILAQDRHEE--RNCCPYLLGCQPQRFPAHLPSCRARLQH 374
           WR L +  GS  +  +    +   N C Y+L    +  P++L  C   L H
Sbjct: 383 WRRLSENIGSHLVGGRTNFNDDNNNTCNYVLSLSFEELPSYLKHCFLYLAH 433


>At1g58602.1 68414.m06655 disease resistance protein (CC-NBS-LRR
           class), putative similar to diesease resistance protein
           rpp8 [Arabidopsis thaliana] gi|3901294|gb|AAC78631
          Length = 1138

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 14/51 (27%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
 Frame = +3

Query: 228 WRSLEQRYGSSYILAQDRHEE--RNCCPYLLGCQPQRFPAHLPSCRARLQH 374
           WR L +  GS  +  +    +   N C Y+L    +  P++L  C   L H
Sbjct: 387 WRRLSENIGSHLVGGRTNFNDDNNNSCNYVLSLSFEELPSYLKHCFLYLAH 437


>At5g60520.1 68418.m07589 late embryogenesis abundant
           protein-related / LEA protein-related similar to late
           embryogenesis abundant protein [Picea glauca] GI:1350543
          Length = 338

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +1

Query: 388 SAKVKSCAECNKDNCNGAGSICF 456
           S+K +   +  K NCNG GS+C+
Sbjct: 89  SSKCEVTCKWRKANCNGYGSLCY 111


>At1g20970.1 68414.m02625 adhesin-related contains TIGRFAM TIGR01612:
            reticulocyte binding protein; contains TIGRFAM TIGR00864:
            polycystin cation channel protein; similar to
            fimbriae-associated protein Fap1 [Streptococcus
            parasanguinis] (GI:3929312)
          Length = 1498

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
 Frame = +1

Query: 271  HKIV-MKSGTVVRTCLDVNPNDSQHTCR-VVELAYNTAIADSAK 396
            H+IV  +S T+VR+C   +P    H C+ +V L + +   D A+
Sbjct: 1397 HRIVPSRSSTIVRSCHISHPGVVPHQCQEIVHLDFPSLFKDRAE 1440


>At1g10000.1 68414.m01128 expressed protein
          Length = 303

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = +3

Query: 222 SAWRSLEQRYGSSYILAQDRHEERNCCPYLLGCQPQRFPAHL 347
           +AW+      GS ++     H E+    +  GC  +RFP+ L
Sbjct: 166 AAWQQQSSLAGSGWVFQATSHSEKEITTFSAGC--RRFPSPL 205


>At5g60530.1 68418.m07590 late embryogenesis abundant
           protein-related / LEA protein-related similar to late
           embryogenesis abundant protein [Picea glauca] GI:1350543
          Length = 439

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +1

Query: 394 KVKSCAECNKDNCNGAGSICF 456
           K ++  +  K NCNG GS+C+
Sbjct: 191 KCEATCKWRKTNCNGYGSLCY 211


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,948,683
Number of Sequences: 28952
Number of extensions: 214509
Number of successful extensions: 636
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 626
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 636
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 987020800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)