Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0399
         (713 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   7.5  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   9.9  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   9.9  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   9.9  

>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = +3

Query: 105 NQGSYFMFIYFFKLNYTL**NLLGVNLKITVVFV 206
           +Q   F  + FF ++YTL  +++G      V+F+
Sbjct: 349 HQKVQFSVLGFFVVDYTLLYSIVGAVTTYLVIFI 382


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +1

Query: 505 NPDVNGKQYSFVNVTKNILV 564
           NP  NGK Y+F    K +++
Sbjct: 347 NPVTNGKLYNFNTFAKLLIL 366


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 604 TDLSFKECNWCTKIQEYF 551
           T  S +  +WC K+QE F
Sbjct: 302 TIASKQTISWCYKLQEQF 319


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 604 TDLSFKECNWCTKIQEYF 551
           T  S +  +WC K+QE F
Sbjct: 302 TIASKQTISWCYKLQEQF 319


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,297
Number of Sequences: 336
Number of extensions: 3913
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)