Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0396
         (764 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q18Q13 Cluster: Triosephosphate isomerase; n=2; Desulfi...    35   2.5  
UniRef50_Q54P11 Cluster: Putative uncharacterized protein; n=1; ...    33   5.9  
UniRef50_Q89AH5 Cluster: Flagellar P-ring protein precursor; n=1...    33   5.9  
UniRef50_Q0J4A1 Cluster: Os08g0526700 protein; n=4; Oryza sativa...    33   7.8  

>UniRef50_Q18Q13 Cluster: Triosephosphate isomerase; n=2;
           Desulfitobacterium hafniense|Rep: Triosephosphate
           isomerase - Desulfitobacterium hafniense (strain DCB-2)
          Length = 309

 Score = 34.7 bits (76), Expect = 2.5
 Identities = 17/43 (39%), Positives = 25/43 (58%)
 Frame = +1

Query: 445 RGVTRDTTLTAGSIAGFSYNK*VDYYQSRQCNFWTMIGKSEKR 573
           +GV R+  +  G+   FS N+     +S  C+ WTMIG SE+R
Sbjct: 82  QGVFREDVVVGGNFGAFSTNRPAAAAKSLNCS-WTMIGHSEER 123


>UniRef50_Q54P11 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 396

 Score = 33.5 bits (73), Expect = 5.9
 Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
 Frame = +2

Query: 29  RKVSDAVNNESLNDCRNNGNQNYIEN*TRVINYTCIMVIVTIYRRPTPQSIG---DLLLL 199
           R  +   NN + N+  NN NQN I   T     T  +  +T      P  +G   D  L 
Sbjct: 53  RFYTSTTNNNNNNN--NNNNQNVITTPTSTATKTTELTELTESTSYDPNKLGGGIDETLK 110

Query: 200 ISGADFGHVTDNQTIHINKI-AYIHVNVYMLH 292
           I+  DF HV D + + I  + ++I V +  LH
Sbjct: 111 INLEDFKHVLDPEMVPITGLPSFIEVCLNQLH 142


>UniRef50_Q89AH5 Cluster: Flagellar P-ring protein precursor; n=1;
           Buchnera aphidicola (Baizongia pistaciae)|Rep: Flagellar
           P-ring protein precursor - Buchnera aphidicola subsp.
           Baizongia pistaciae
          Length = 375

 Score = 33.5 bits (73), Expect = 5.9
 Identities = 20/55 (36%), Positives = 29/55 (52%)
 Frame = +2

Query: 122 NYTCIMVIVTIYRRPTPQSIGDLLLLISGADFGHVTDNQTIHINKIAYIHVNVYM 286
           N   + ++ TI     P  I D  +LI+ A  G++  NQTI+IN  A  H N+ M
Sbjct: 233 NIEQVEMLATIQNINIPIPIQDAKILIN-AKTGNIITNQTININTCAITHKNISM 286


>UniRef50_Q0J4A1 Cluster: Os08g0526700 protein; n=4; Oryza
           sativa|Rep: Os08g0526700 protein - Oryza sativa subsp.
           japonica (Rice)
          Length = 488

 Score = 33.1 bits (72), Expect = 7.8
 Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
 Frame = +2

Query: 2   VRRILSTRIRKVSDAVNNESLNDCRNNGNQNYIEN*TRVINYTCIM--VIVTIYRRP 166
           V  +  T+I+ V  AV+ E L DC  N  +NY ++ T+V     I+  +I  I + P
Sbjct: 356 VPTLTPTKIKPVEPAVSPEQLRDCLRNLKKNYKDDTTKVTRAFQILLKIIANIVKNP 412


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 676,425,201
Number of Sequences: 1657284
Number of extensions: 12819693
Number of successful extensions: 40438
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 27597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39001
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 63792713725
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)