Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0396
         (764 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   7.2  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   7.2  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    22   7.2  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    21   9.5  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 80  YCGSRSGIHYLRR 42
           YCG R+G+ +L R
Sbjct: 687 YCGIRAGLSWLER 699


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 80  YCGSRSGIHYLRR 42
           YCG R+G+ +L R
Sbjct: 725 YCGIRAGLSWLER 737


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 7/19 (36%), Positives = 15/19 (78%)
 Frame = -2

Query: 742 IDMSIQIDLNIIVSFKEYG 686
           +D+++ +DL+I  + +EYG
Sbjct: 676 VDVTLPLDLHIQNAIREYG 694


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +2

Query: 29  RKVSDAVNNESLNDCRNNGNQN 94
           RK+ D V  + + + R N N+N
Sbjct: 453 RKIMDMVREKIIEEKRKNKNKN 474


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,007
Number of Sequences: 438
Number of extensions: 4744
Number of successful extensions: 15
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23911269
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)