Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0393
(751 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M24355-1|AAA52454.1| 416|Homo sapiens FLG protein. 34 0.47
AL356504-1|CAI19595.1| 4061|Homo sapiens filaggrin protein. 34 0.47
AB208881-1|BAD92118.1| 583|Homo sapiens PREDICTED: filaggrin va... 34 0.47
X63338-1|CAA44938.1| 175|Homo sapiens high sulfur keratin protein. 32 2.5
M29581-1|AAA61314.1| 543|Homo sapiens ZNF8 protein. 31 3.3
CR457257-1|CAG33538.1| 423|Homo sapiens RNPC4 protein. 31 3.3
BC052266-1|AAH52266.1| 641|Homo sapiens FZD2 protein protein. 31 3.3
BC024208-1|AAH24208.1| 423|Homo sapiens RNA binding motif prote... 31 3.3
BC002566-1|AAH02566.1| 424|Homo sapiens RNA binding motif prote... 31 3.3
AK001344-1|BAA91638.1| 406|Homo sapiens protein ( Homo sapiens ... 31 3.3
AF087905-1|AAP97203.1| 425|Homo sapiens splicing factor SF2 pro... 31 3.3
BC039323-1|AAH39323.1| 575|Homo sapiens zinc finger protein 8 p... 31 5.8
>M24355-1|AAA52454.1| 416|Homo sapiens FLG protein.
Length = 416
Score = 34.3 bits (75), Expect = 0.47
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 9/76 (11%)
Frame = -3
Query: 443 HDGHQRCSLLYVRNHQAQRGSSYH-VRHHHRGSRAGSCGHQCEGQPRS---KHSRIWG-- 282
H G + S + Q+ GS + RHH SRA S GH GQ +S + SR WG
Sbjct: 119 HSGSRSASRQTRNDEQSGDGSRHSGSRHHEASSRADSSGHSQVGQGQSEGPRTSRNWGSS 178
Query: 281 ---EHRCRGHERSQEK 243
+ +GH E+
Sbjct: 179 FSQDSDSQGHSEDSER 194
>AL356504-1|CAI19595.1| 4061|Homo sapiens filaggrin protein.
Length = 4061
Score = 34.3 bits (75), Expect = 0.47
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 9/76 (11%)
Frame = -3
Query: 443 HDGHQRCSLLYVRNHQAQRGSSYH-VRHHHRGSRAGSCGHQCEGQPRS---KHSRIWG-- 282
H G + S + Q+ GS + RHH SRA S GH GQ +S + SR WG
Sbjct: 2507 HSGSRSASRQTRNDEQSGDGSRHSGSRHHEASSRADSSGHSQVGQGQSEGPRTSRNWGSS 2566
Query: 281 ---EHRCRGHERSQEK 243
+ +GH E+
Sbjct: 2567 FSQDSDSQGHSEDSER 2582
>AB208881-1|BAD92118.1| 583|Homo sapiens PREDICTED: filaggrin
variant protein.
Length = 583
Score = 34.3 bits (75), Expect = 0.47
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 9/76 (11%)
Frame = -3
Query: 443 HDGHQRCSLLYVRNHQAQRGSSYH-VRHHHRGSRAGSCGHQCEGQPRS---KHSRIWG-- 282
H G + S + Q+ GS + RHH SRA S GH GQ +S + SR WG
Sbjct: 23 HSGSRSASRQTRNDEQSGDGSRHSGSRHHEASSRADSSGHSQVGQGQSEGPRTSRNWGSS 82
Query: 281 ---EHRCRGHERSQEK 243
+ +GH E+
Sbjct: 83 FSQDSDSQGHSEDSER 98
>X63338-1|CAA44938.1| 175|Homo sapiens high sulfur keratin protein.
Length = 175
Score = 31.9 bits (69), Expect = 2.5
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = +3
Query: 12 CSPKCSSLAPCWPPPTLVFCHTTTLRQFRPRASSVMMPRH 131
C P C C PP +V CHT T Q +S P +
Sbjct: 118 CRPDCRVEGTCLPPCCVVSCHTPTCCQLHHAEASCCRPSY 157
>M29581-1|AAA61314.1| 543|Homo sapiens ZNF8 protein.
Length = 543
Score = 31.5 bits (68), Expect = 3.3
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -3
Query: 407 RNHQAQRGSSYHVRHHHRGSRAGSCGHQCEGQPRSK 300
R Q+ +S+ V+H H SR S G + GQP S+
Sbjct: 469 RREQSSSRNSHLVQHQHPNSRKSSAGGRKAGQPESR 504
>CR457257-1|CAG33538.1| 423|Homo sapiens RNPC4 protein.
Length = 423
Score = 31.5 bits (68), Expect = 3.3
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = -3
Query: 368 RHHHRGSRAGSCGHQCEGQPRSKHSRIWGEHRCRGHER 255
R+ R SR+ S G QC + RS R E R R H R
Sbjct: 67 RYRRRNSRSRSPGRQCRHRSRSWDRRHGSESRSRDHRR 104
>BC052266-1|AAH52266.1| 641|Homo sapiens FZD2 protein protein.
Length = 641
Score = 31.5 bits (68), Expect = 3.3
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 105 ASSVMMPRHTMPRLITPLLIMPHPLSMQLH 194
A++ M PR +PRL+ PLL++P Q H
Sbjct: 73 AAASMRPRSALPRLLLPLLLLPAAGPAQFH 102
>BC024208-1|AAH24208.1| 423|Homo sapiens RNA binding motif protein
23 protein.
Length = 423
Score = 31.5 bits (68), Expect = 3.3
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = -3
Query: 368 RHHHRGSRAGSCGHQCEGQPRSKHSRIWGEHRCRGHER 255
R+ R SR+ S G QC + RS R E R R H R
Sbjct: 67 RYRRRNSRSRSPGRQCRHRSRSWDRRHGSESRSRDHRR 104
>BC002566-1|AAH02566.1| 424|Homo sapiens RNA binding motif protein
23 protein.
Length = 424
Score = 31.5 bits (68), Expect = 3.3
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = -3
Query: 368 RHHHRGSRAGSCGHQCEGQPRSKHSRIWGEHRCRGHER 255
R+ R SR+ S G QC + RS R E R R H R
Sbjct: 67 RYRRRNSRSRSPGRQCRHRSRSWDRRHGSESRSRDHRR 104
>AK001344-1|BAA91638.1| 406|Homo sapiens protein ( Homo sapiens
cDNA FLJ10482 fis, clone NT2RP2000153, weakly similar to
GAR2 PROTEIN. ).
Length = 406
Score = 31.5 bits (68), Expect = 3.3
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = -3
Query: 368 RHHHRGSRAGSCGHQCEGQPRSKHSRIWGEHRCRGHER 255
R+ R SR+ S G QC + RS R E R R H R
Sbjct: 67 RYRRRNSRSRSPGRQCRHRSRSWDRRHGSESRSRDHRR 104
>AF087905-1|AAP97203.1| 425|Homo sapiens splicing factor SF2
protein.
Length = 425
Score = 31.5 bits (68), Expect = 3.3
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = -3
Query: 368 RHHHRGSRAGSCGHQCEGQPRSKHSRIWGEHRCRGHER 255
R+ R SR+ S G QC + RS R E R R H R
Sbjct: 67 RYRRRNSRSRSPGRQCRHRSRSWDRRHGSESRSRDHRR 104
>BC039323-1|AAH39323.1| 575|Homo sapiens zinc finger protein 8
protein.
Length = 575
Score = 30.7 bits (66), Expect = 5.8
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -3
Query: 407 RNHQAQRGSSYHVRHHHRGSRAGSCGHQCEGQPRSK 300
R Q+ +S+ V+H H SR S G GQP S+
Sbjct: 501 RREQSSSRNSHLVQHQHPNSRKSSAGGAKAGQPESR 536
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,757,915
Number of Sequences: 237096
Number of extensions: 1646066
Number of successful extensions: 5348
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5325
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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