Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0393
         (751 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23523-4|AAC46557.1|   83|Caenorhabditis elegans Hypothetical pr...    31   0.66 
Z68118-5|CAA92185.1|  245|Caenorhabditis elegans Hypothetical pr...    31   0.87 
AL132948-1|CAC51077.1|  735|Caenorhabditis elegans Hypothetical ...    31   0.87 
Z96102-3|CAE17868.1|  686|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z81491-16|CAE17747.1|  686|Caenorhabditis elegans Hypothetical p...    29   3.5  
AF125964-1|AAD14753.1|  471|Caenorhabditis elegans Hypothetical ...    28   6.2  

>U23523-4|AAC46557.1|   83|Caenorhabditis elegans Hypothetical
           protein F53A9.2 protein.
          Length = 83

 Score = 31.5 bits (68), Expect = 0.66
 Identities = 14/47 (29%), Positives = 16/47 (34%)
 Frame = -3

Query: 401 HQAQRGSSYHVRHHHRGSRAGSCGHQCEGQPRSKHSRIWGEHRCRGH 261
           H    G  +H  HHH  S     GH   G     H   +G H    H
Sbjct: 34  HVHTDGGHHHGHHHHHHSFLHELGHALTGHHHHHHGHHFGHHHHHHH 80


>Z68118-5|CAA92185.1|  245|Caenorhabditis elegans Hypothetical
           protein R01E6.5 protein.
          Length = 245

 Score = 31.1 bits (67), Expect = 0.87
 Identities = 12/45 (26%), Positives = 22/45 (48%)
 Frame = -3

Query: 446 NHDGHQRCSLLYVRNHQAQRGSSYHVRHHHRGSRAGSCGHQCEGQ 312
           +H  H+  S  Y    ++Q G ++H +  H G  A   G+  +G+
Sbjct: 6   SHSSHENASGKYGYGDESQHGKNFHQKAEHSGHEAKEKGYSQDGK 50


>AL132948-1|CAC51077.1|  735|Caenorhabditis elegans Hypothetical
           protein Y39B6A.1 protein.
          Length = 735

 Score = 31.1 bits (67), Expect = 0.87
 Identities = 24/109 (22%), Positives = 31/109 (28%)
 Frame = -3

Query: 443 HDGHQRCSLLYVRNHQAQRGSSYHVRHHHRGSRAGSCGHQCEGQPRSKHSRIWGEHRCRG 264
           H GH      +   H +     +H  HHH  +  G  G          H    G H   G
Sbjct: 438 HHGHHES---HGHGHHSPAHHGHHGEHHHAPAHHGHHGEHHHAPAHHGHHGEHGTH--HG 492

Query: 263 HERSQEKXXXXXXXXXXXXXXX*VELHGQWVRHNEQGRNEPRHSVPGHH 117
           H  S                      HG+   H+  G +   H  P HH
Sbjct: 493 HHGSHHSPAHHGHHGEHHHAPAHHGHHGEHGTHH--GHHGEHHHAPAHH 539



 Score = 28.7 bits (61), Expect = 4.7
 Identities = 25/102 (24%), Positives = 27/102 (26%), Gaps = 7/102 (6%)
 Frame = -3

Query: 401 HQAQRGSSYHV--RHHHRGSRAGSCGHQCEGQPRSKHSRIWGEHRC-RGHERSQEKXXXX 231
           H    G  +H    H H G      GH  E      H    GEH    GH  S       
Sbjct: 502 HHGHHGEHHHAPAHHGHHGEHGTHHGHHGEHHHAPAHHGHHGEHGTHHGHHGSHHSPAHH 561

Query: 230 XXXXXXXXXXX*VELHGQWVRHN-EQGRNEPR---HSVPGHH 117
                          HG    H    G +E     H  P HH
Sbjct: 562 GHHGEHHHAPAHHGHHGHHGSHGVHHGHHESHGHGHHAPAHH 603


>Z96102-3|CAE17868.1|  686|Caenorhabditis elegans Hypothetical
           protein D1086.9 protein.
          Length = 686

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = -3

Query: 392 QRGSSYHVRHHHRGSR-AGSCGHQCEGQPRSKHSRIWGEHRCRGHERSQEK 243
           Q+G+    +  HRGSR AG  G Q   Q R + SR  GE   +  ++ Q +
Sbjct: 477 QKGTQQADQEQHRGSRAAGEKGTQQLDQERHRGSRAAGEKGTQQADQEQHR 527


>Z81491-16|CAE17747.1|  686|Caenorhabditis elegans Hypothetical
           protein D1086.9 protein.
          Length = 686

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = -3

Query: 392 QRGSSYHVRHHHRGSR-AGSCGHQCEGQPRSKHSRIWGEHRCRGHERSQEK 243
           Q+G+    +  HRGSR AG  G Q   Q R + SR  GE   +  ++ Q +
Sbjct: 477 QKGTQQADQEQHRGSRAAGEKGTQQLDQERHRGSRAAGEKGTQQADQEQHR 527


>AF125964-1|AAD14753.1|  471|Caenorhabditis elegans Hypothetical
           protein W03G1.5 protein.
          Length = 471

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 22/90 (24%), Positives = 27/90 (30%)
 Frame = -3

Query: 374 HVRHHHRGSRAGSCGHQCEGQPRSKHSRIWGEHRCRGHERSQEKXXXXXXXXXXXXXXX* 195
           H  H   GSR+GS G +     R       G H   G      +                
Sbjct: 334 HGGHGRHGSRSGSPGGRHGHGGRHGPPHCPGRHGRHGSRSHSPRGHGHGGRHGPPHCPGR 393

Query: 194 VELHGQWVRHNEQGRNEPRHSVPGHHDGRC 105
              HG    H+  GR+  RH    HH   C
Sbjct: 394 HGHHGPPHHHHHDGRSPSRHGHHHHHHHGC 423


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,192,425
Number of Sequences: 27780
Number of extensions: 238584
Number of successful extensions: 751
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 749
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)