Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0392
         (770 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_1186 - 28260487-28262112,28262205-28262345,28262429-282625...    28   9.5  

>06_03_1186 -
           28260487-28262112,28262205-28262345,28262429-28262573,
           28262964-28263067,28263324-28263456,28263904-28264013,
           28265144-28265167
          Length = 760

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
 Frame = +2

Query: 230 EYILKFSNIFPSKSNGHIKGNKKKN--VAY*INFENLLVNRLFRHY 361
           E  + F N+ P   NGH + +K +N      ++ E  ++++L RHY
Sbjct: 630 EAAIDFGNLLPRTGNGH-RRHKSRNTDARSGVDEEERMMDKLLRHY 674


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,284,749
Number of Sequences: 37544
Number of extensions: 328131
Number of successful extensions: 588
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 581
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 588
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2075009728
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)