Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0391
(799 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit C... 376 e-105
SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit ... 119 6e-28
SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subu... 113 4e-26
SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subuni... 110 2e-25
SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit ... 110 3e-25
SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit... 79 6e-16
SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit C... 78 2e-15
SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit... 61 2e-10
SPBC3E7.01 |fab1|ste12, SPBC6B1.11c|1-phosphatidylinositol-3-pho... 31 0.25
SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces po... 30 0.44
SPAC15A10.03c |rhp54|rad54|Rad54 homolog Rhp54|Schizosaccharomyc... 29 0.58
SPBC1289.04c |pob1||Boi family protein|Schizosaccharomyces pombe... 28 1.3
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 27 2.4
SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase ki... 27 2.4
SPCC1494.10 ||SPCC70.01|transcription factor |Schizosaccharomyce... 27 3.1
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 27 4.1
SPBC25H2.07 |tif11||translation initiation factor eIF1A|Schizosa... 27 4.1
SPCC1827.05c |||nucleolar RNA-binding protein NIFK |Schizosaccha... 26 7.2
SPCC162.09c |hmg1||3-hydroxy-3-methylglutaryl-CoA reductase|Schi... 26 7.2
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 26 7.2
SPAC6B12.04c |||aminotransferase class I and II|Schizosaccharomy... 25 9.5
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 9.5
SPBC4C3.05c |nuc1|rpa1|DNA-directed RNA polymerase I complex lar... 25 9.5
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 25 9.5
SPBC21C3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 25 9.5
>SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit
Cct2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 376 bits (924), Expect = e-105
Identities = 179/253 (70%), Positives = 214/253 (84%)
Frame = +1
Query: 31 ASLRVDLENIARTTLSSKILSNHKEHFTKLAVDAVLRLKGSGNLKAIQIIKISGGLLEES 210
A R DLENIARTTLSSKILS +K HF +LAVDAVLRLKGS NL IQIIKI GG L++S
Sbjct: 149 AKFRSDLENIARTTLSSKILSQNKNHFAQLAVDAVLRLKGSTNLDNIQIIKILGGKLDDS 208
Query: 211 FLDEGFLLNKKVGVHQPKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAEK 390
FLDEGF+LNK +GV+ PK +ENANILIANT MDTDK+KVFG+ ++VD+ K+AELE AE+
Sbjct: 209 FLDEGFILNKTIGVNCPKVMENANILIANTAMDTDKVKVFGARVRVDTTGKLAELERAER 268
Query: 391 EKMKDKVNKILAHKCNVFINRQLIYNYPEQLFADAGVMAIEHADFEGIERLGLVTGGEIV 570
EKMK KV KI +H N FINRQLIYN+PEQLFADAG+M+IEHADF+GIERL LVTGGEI
Sbjct: 269 EKMKAKVEKIKSHNINCFINRQLIYNWPEQLFADAGIMSIEHADFDGIERLSLVTGGEIA 328
Query: 571 STFDSPDKVKLGHCKLIEEVLIGDESLIRFSGVALGSACTIVIRGATQQVIDEAERSLHD 750
STFD P+ VKLGHCK IEE++IG++ +I+FSGV G ACTIV+RGAT Q++DE+ER++HD
Sbjct: 329 STFDHPELVKLGHCKKIEEIIIGEDKMIKFSGVEAGEACTIVLRGATHQLLDESERAIHD 388
Query: 751 ALCVLAATVKEPK 789
AL VL+ TV E +
Sbjct: 389 ALAVLSQTVAESR 401
>SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit
Cct7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 558
Score = 119 bits (286), Expect = 6e-28
Identities = 78/257 (30%), Positives = 123/257 (47%), Gaps = 5/257 (1%)
Frame = +1
Query: 25 NEASLRVDLENIARTTLSSKILSNHKEHFTKLAVDAVLRLKGSG-NLKAIQIIKISGGLL 201
+E LR L A T ++SK++ ++ FTK+ VDAVL L N I I K+ GG +
Sbjct: 151 DEGKLRDLLTKCASTAMNSKLIRSNSTFFTKMVVDAVLTLDQEDLNENMIGIKKVPGGAM 210
Query: 202 EESFLDEGFLLNKKVGV----HQPKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIA 369
E+S L +G K QPK +N IL + ++ K + + ++VD + +
Sbjct: 211 EDSLLVKGVAFKKTFSYAGFEQQPKFFKNPKILCLDVELEL-KAEKDNAEVRVDKVQEYQ 269
Query: 370 ELEVAEKEKMKDKVNKILAHKCNVFINRQLIYNYPEQLFADAGVMAIEHADFEGIERLGL 549
+ AE + K+ I+A V +++ I + Q FAD + + + R+
Sbjct: 270 NIVDAEWRIIFSKLEAIVATGAKVVLSKLPIGDLATQYFADRDIFCAGRVAADDLNRVVQ 329
Query: 550 VTGGEIVSTFDSPDKVKLGHCKLIEEVLIGDESLIRFSGVALGSACTIVIRGATQQVIDE 729
GG I ST + ++ LG C EE IG + F G CT+++RG Q I E
Sbjct: 330 AVGGSIQSTCSNIEEKHLGTCDTFEERQIGGDRFNLFEGCPKAKTCTLILRGGADQFIAE 389
Query: 730 AERSLHDALCVLAATVK 780
ERSLHDA+ ++ +K
Sbjct: 390 VERSLHDAIMIVKHALK 406
>SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subunit
Cct5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 546
Score = 113 bits (271), Expect = 4e-26
Identities = 70/248 (28%), Positives = 127/248 (51%), Gaps = 7/248 (2%)
Frame = +1
Query: 61 ARTTLSSKILSNHKEHFTKLAVDAVLRLKGSGNLKA-IQIIKISG---GLLEESFLDEGF 228
A+T+L SK++S +HF +AVDAVL + ++IK+ G G ++++ L +G
Sbjct: 171 AKTSLGSKVVSKAHDHFANIAVDAVLSVADLQRKDVDFELIKVDGKVGGSVDDTKLVKGV 230
Query: 229 LLNKKVGVHQ-PKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAEKEKMKD 405
+++K + Q P ++ENA I I P + K K + + S+++ L+ EKEK ++
Sbjct: 231 VVDKDMSHPQMPHRIENAKIAILTCPFEPPKPKT-KHKLDITSVSEFEALQAYEKEKFQE 289
Query: 406 KVNKILAHKCNVFINRQLIYNYPEQLFADAGVMAIEHADFEGIERLGLVTGGEIVSTFDS 585
+ + N+ I + + L + A+ IE + + T G IV F+
Sbjct: 290 MIKHVKDAGANLVICQWGFDDEANHLLLQNNLPAVRWVGGPEIELIAIATNGRIVPRFED 349
Query: 586 PDKVKLGHCKLIEEVLIGD--ESLIRFSGVALGSACTIVIRGATQQVIDEAERSLHDALC 759
KLG ++ EV G + ++ A A T+ +RG+ + ++DEA+R+LHDALC
Sbjct: 350 LSSDKLGSAGIVREVSFGTTRDKILVIEKCANSRAVTVFVRGSNKMIVDEAKRALHDALC 409
Query: 760 VLAATVKE 783
V+ +++
Sbjct: 410 VVRNLIRD 417
>SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subunit
Cct1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 110 bits (265), Expect = 2e-25
Identities = 76/262 (29%), Positives = 135/262 (51%), Gaps = 15/262 (5%)
Frame = +1
Query: 49 LENIARTTLSSKILSNHKEHFTKLAVDAVLRLKGSGN-------LKAIQIIKISGGLLEE 207
L N+A+T++SSKI+ N + F+ +AVDA+L +K S + +KA+ I+K G E
Sbjct: 153 LINVAKTSMSSKIIGNDSDFFSTMAVDAMLSVKTSNSKGETRYPVKAVNILKAHGKSSRE 212
Query: 208 SFLDEGFLLNKKVGVHQPK-KVENANILIANTPMDTDKIKV-FGSTIKVDSMAKIAELEV 381
S L +G+ LN + K +V+NA I + + MD K K+ G + +D ++ ++
Sbjct: 213 SVLVKGYALNCTIASQAMKTRVQNAKIAVLD--MDLQKTKMALGVHVTIDDPDQLEKIRE 270
Query: 382 AEKEKMKDKVNKILAHKCNVFINRQLIYNYPEQLFADAGVMAIEHADFEGIERLGLVTGG 561
E ++V KIL NV + + I + + +AG MA+ E + R+ +G
Sbjct: 271 REVMITLERVKKILNAGANVILTTKGIDDLCLKSIIEAGAMAVRRCKKEDLRRIAKASGA 330
Query: 562 EIVSTFDSPDKVK------LGHCKLIEEVLIGDESLIRFSGVALGSACTIVIRGATQQVI 723
++S+ + + + LG + + + D+ I G S+ +IV+RG + +
Sbjct: 331 TLLSSLSNLEGEETFESSYLGSAEEVVQEKFSDDECILVKGTKAYSSASIVLRGPNEYSL 390
Query: 724 DEAERSLHDALCVLAATVKEPK 789
DE ERS+HD+L V+ T++ K
Sbjct: 391 DEMERSMHDSLSVVKRTLESGK 412
>SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit
Cct4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 527
Score = 110 bits (264), Expect = 3e-25
Identities = 80/265 (30%), Positives = 134/265 (50%), Gaps = 13/265 (4%)
Frame = +1
Query: 28 EASLRVDLENIARTTLSSKILSNHKEHFTKLAVDAVL-----RLKGSGNLKAIQIIKISG 192
E S R L A T+L+SKI+S + +AVDAVL R+ + +LK I+I+K G
Sbjct: 143 ELSDRESLLRAATTSLNSKIVSQYSNLLAPIAVDAVLKVIDPRVATNVDLKDIRIVKKLG 202
Query: 193 GLLEESFLDEGFLLNKKV--GVHQPKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKI 366
G+++++ L G L + P ++E ANI + + K + + V+ ++
Sbjct: 203 GIIDDTELIPGLALTQTAVKSAGGPTRIEKANIALIQFQLSPPKPDMENQVV-VNDYRQM 261
Query: 367 AELEVAEKEKMKDKVNKILAHKCNVF-----INRQLIYNYPEQLFADAGVMAIEHADFEG 531
++ E++ + + KI NV I R + + A +M I+ + +
Sbjct: 262 DKILKEERQYLLNMCKKIKKAGANVILIQKSILRDAVNDLALHFLAKLKIMVIKDIERDE 321
Query: 532 IERLGLVTGGEIVSTFDSPDKVKLGHCKLIEEVLIGDESLIRFSGVA-LGSACTIVIRGA 708
+E + TG + ++ +S + KLGH L+EE E +++FSGV G +I+ RGA
Sbjct: 322 VEFICKSTGCKPIADIESFAEDKLGHADLVEETSSSGEKIVKFSGVKNAGKTVSILCRGA 381
Query: 709 TQQVIDEAERSLHDALCVLAATVKE 783
++EAERSLHDALCV+ VK+
Sbjct: 382 NLLTLEEAERSLHDALCVIRCLVKQ 406
>SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit
Cct3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 528
Score = 79.4 bits (187), Expect = 6e-16
Identities = 60/257 (23%), Positives = 121/257 (47%), Gaps = 9/257 (3%)
Frame = +1
Query: 46 DLENIARTTLSSKILSNHKEHFTKLAVDAVLRLKGSGN-------LKAIQIIKISGGLLE 204
++ + RT + +K+++ + LA+ AV + + N + ++ K+ GG +E
Sbjct: 149 EMFRLIRTCIGTKLVARWSDLMCHLALRAVRTVASTSNGRMEIDIKRYARVEKVPGGEIE 208
Query: 205 ESFLDEGFLLNKKVG-VHQPKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEV 381
S + +G +LNK V +++EN I++ + P++ K + + I++ +
Sbjct: 209 SSCVLDGVMLNKDVTHPKMRRRIENPRIVLLDCPLEYRKGES-QTNIEISKDTDWNRILE 267
Query: 382 AEKEKMKDKVNKILAHKCNVFINRQLIYNYPEQLFADAGVMAIEHADFEGIERLGLVTGG 561
E+E++K + I+A K ++ I + + + + A + A+ R+ G
Sbjct: 268 IEEEQVKRMCDYIIAVKPDLVITEKGVSDLAQHYLLKANITALRRTRKSDNNRIARACGA 327
Query: 562 EIVSTFDSPDKVKLGH-CKLIEEVLIGDESLIRFSGVALGSACTIVIRGATQQVIDEAER 738
IV+ + + +G C L +GDE +G ACTI++RG ++ +I+E ER
Sbjct: 328 NIVNRLEDLREKDVGTGCGLFYIDKLGDEYYTFLTGCKNPKACTILLRGPSKDIINEVER 387
Query: 739 SLHDALCVLAATVKEPK 789
+L DA+ V PK
Sbjct: 388 NLQDAMAVARNVFFHPK 404
>SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit
Cct6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 77.8 bits (183), Expect = 2e-15
Identities = 69/259 (26%), Positives = 120/259 (46%), Gaps = 14/259 (5%)
Frame = +1
Query: 49 LENIARTTLSSKILSNHKEHFTKLAVDAVLRLKGSG---NLKAIQIIKISGGLLEESFLD 219
L N+A+T+LS+KI S E VDA+L ++ +L ++I+K+ ++ L
Sbjct: 146 LLNVAKTSLSTKISSKVVESLAPAVVDAILTIRRPDEPIDLHMVEIMKMQNRSASDTQLI 205
Query: 220 EGFLLNKKVG-VHQPKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAEKEK 396
G LL+ PK+V+NA ILI N ++ +K ++ S + + L +E++
Sbjct: 206 RGLLLDHGARHPDMPKQVKNAYILILNVSLEYEKSEI-NSGFFYSTSEQRERLVESERKF 264
Query: 397 MKDKVNKILAHK---CN-------VFINRQLIYNYPEQLFADAGVMAIEHADFEGIERLG 546
+ +K+ KI+ K C V IN++ I + A G+MA+ A +ERL
Sbjct: 265 VDNKLRKIVELKKEVCERDPTANFVIINQKGIDPLSLDVLAKNGIMALRRAKRRNMERLQ 324
Query: 547 LVTGGEIVSTFDSPDKVKLGHCKLIEEVLIGDESLIRFSGVALGSACTIVIRGATQQVID 726
L GG ++ D + LG + E +G+E V + TI+I G I
Sbjct: 325 LACGGVAQNSVDDLNPEVLGWAGSVYERTLGEEKYTFVEDVKDPKSATILIHGPNTYTIQ 384
Query: 727 EAERSLHDALCVLAATVKE 783
+ + + D L + V++
Sbjct: 385 QIQDATRDGLRAVKNAVED 403
Score = 29.9 bits (64), Expect = 0.44
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = -2
Query: 783 FFYSSSKHAKRIME*TLSFVDNLLR 709
FFYS+S+ +R++E FVDN LR
Sbjct: 246 FFYSTSEQRERLVESERKFVDNKLR 270
>SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit
Cct8 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 546
Score = 60.9 bits (141), Expect = 2e-10
Identities = 53/251 (21%), Positives = 113/251 (45%), Gaps = 5/251 (1%)
Frame = +1
Query: 46 DLENIARTTLSSKILSNHKEHFTKLAVDAVLRL----KGSGNLKAIQIIKISGGLLEESF 213
+L RT +SSK N ++ + L A+L + N+ I+++KI G L S
Sbjct: 158 ELIKAIRTCISSKQYGN-EDFLSDLVAKAILTVLPKDPSKFNVDNIRVVKIMGSSLYNSQ 216
Query: 214 LDEGFLLNKKVGVHQPKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAEKE 393
+ +G + ++ + E A + + + P+D + + G T+ + + ++ + E+
Sbjct: 217 VVKGMVFPREPEGTVTRSKE-AKVAVFSCPLDISQTETKG-TVLLHNAQEMLDFSKGEEN 274
Query: 394 KMKDKVNKILAHKCNVFINRQLIYNYPEQLFADAGVMAIEHADFEGIERLGLVTGGEIVS 573
++ + +I V + + + ++ I + RL V G ++
Sbjct: 275 LIESHIKEIYDAGVRVVVTSGNVNDLVLHYLNRFEILVIRVPSKFELRRLCRVVGATPLA 334
Query: 574 TFDSPDKVKLGHCKLIEEVLIGDESLIRFSGVA-LGSACTIVIRGATQQVIDEAERSLHD 750
P ++G ++E + IG + + F V + TIV+RGAT+ +D+ ER++ D
Sbjct: 335 RMGVPMPEEMGSVDVVETIEIGGDRVTVFRQVEDITRTATIVLRGATKTYLDDLERAIDD 394
Query: 751 ALCVLAATVKE 783
+ ++ A VK+
Sbjct: 395 GVNIVKALVKD 405
>SPBC3E7.01 |fab1|ste12,
SPBC6B1.11c|1-phosphatidylinositol-3-phosphate 5-kinase
Fab1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1932
Score = 30.7 bits (66), Expect = 0.25
Identities = 42/201 (20%), Positives = 84/201 (41%), Gaps = 11/201 (5%)
Frame = +1
Query: 169 IQIIKISGGLLEESFLDEGFLLNKKVGVHQ-PKKVENANILIANTPMD--TDKIKVFGST 339
++I KI GG +++ FL G L +KK + + I + +D D+ ++
Sbjct: 525 VKIKKIPGGSIQDCFLVNGVLFSKKASSKSMDRSLRRPRIALLTFSLDYACDEQRILSLD 584
Query: 340 IKVDSMAKIAELEVAEKEKMKDKVNKILAHKCNVFINRQLIYNYPEQLFADAGVMAIEHA 519
+ + ++E + + VN+I K N+ + I + + F + GV+A
Sbjct: 585 LIISQ----------QEEYIINLVNRICMLKPNLVFAQGQIPSIALKYFEEHGVIAFHGL 634
Query: 520 DFEGIERLGLVTGGEIVSTFDSPDKV-KLGHCKLIE-EVLIGDESL-IRFSGVALGSA-- 684
+ + +I+S+ D +LG C + + DE+ +R + L
Sbjct: 635 KESVLYDIARCCRADIISSIDKLSLCPRLGTCGRFQLRTYVVDENKGLRKTFAILDRCSE 694
Query: 685 ---CTIVIRGATQQVIDEAER 738
CTIV+RGA + + ++
Sbjct: 695 RLGCTIVLRGADYNQLSKVKK 715
>SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 851
Score = 29.9 bits (64), Expect = 0.44
Identities = 19/67 (28%), Positives = 31/67 (46%)
Frame = +1
Query: 250 VHQPKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAEKEKMKDKVNKILAH 429
+H+ K E T K+KV+G + ++I+ L + KEK KD ++ H
Sbjct: 616 IHKEAKSEIEKDSSKPTEDQESKLKVYGRV----AYSRISNLHKSSKEKGKDSQVRVALH 671
Query: 430 KCNVFIN 450
K N +N
Sbjct: 672 KENTALN 678
>SPAC15A10.03c |rhp54|rad54|Rad54 homolog Rhp54|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 852
Score = 29.5 bits (63), Expect = 0.58
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +1
Query: 37 LRVDLENIARTTLSSKILSNHKEHFTKLAVDAVLRLKGSGNLKAIQIIK 183
L V E++ LS LS +K T ++ +LR GS LKAI ++K
Sbjct: 518 LPVKYEHVVFCNLSEFQLSLYKHFITSPEINKILRGTGSQPLKAIGLLK 566
>SPBC1289.04c |pob1||Boi family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 871
Score = 28.3 bits (60), Expect = 1.3
Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Frame = -3
Query: 704 PRITIVQAEPNATPEKRIKLSSPIRTSSINLQ*PSFTLSGESNVDT---ISPPVTKPSLS 534
P+IT + E ++ R+ S+ + SS S T S ES D S PVT +S
Sbjct: 540 PKITTIDGESPSSISSRLPSSNLEQGSS-----SSVTKSPESMPDPSAKASSPVTSKGVS 594
Query: 533 IPSKSACSIAITPAS 489
I KSA + TP S
Sbjct: 595 INEKSAVNNYATPLS 609
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 27.5 bits (58), Expect = 2.4
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Frame = -3
Query: 707 APRITIVQAEPNATPEKRIKLSSPIRTSSINLQ*PSFTL-SGESNVDTIS--PPVTKPSL 537
AP + I + P S+P + + + PS SG V S PPV KPS+
Sbjct: 1040 APPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSV 1099
Query: 536 SIPSKSACSIAITPASA 486
+ P S+A+ P A
Sbjct: 1100 AAPPVPKPSVAVPPVPA 1116
>SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase
kinase Win1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1436
Score = 27.5 bits (58), Expect = 2.4
Identities = 12/50 (24%), Positives = 27/50 (54%)
Frame = -3
Query: 665 PEKRIKLSSPIRTSSINLQ*PSFTLSGESNVDTISPPVTKPSLSIPSKSA 516
P + + +S+P+ +I+ ++ +S + + PP + S+ IP K+A
Sbjct: 100 PAEALTISTPVDPINIDELDRAYAVSPSDTSNLLHPPTSSSSIPIPIKNA 149
>SPCC1494.10 ||SPCC70.01|transcription factor |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 964
Score = 27.1 bits (57), Expect = 3.1
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +1
Query: 229 LLNKKVGVHQPKKVENANILIANTPMDTDKIKVFGST 339
L N P K E N++ AN + DK + FGS+
Sbjct: 108 LYNHMSSAPSPNKKEETNVVHANEDISLDKRQSFGSS 144
>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 726
Score = 26.6 bits (56), Expect = 4.1
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = -3
Query: 650 KLSSPIRTSSINLQ*PSFTLSGESNV-DTISPPVTKPSLSIPSKSACS 510
K S + +S ++ TLS S V T S PVT S S+ KSA S
Sbjct: 194 KASKKLTSSPTSVASKKATLSSVSKVASTSSLPVTSVSASVDPKSAAS 241
>SPBC25H2.07 |tif11||translation initiation factor
eIF1A|Schizosaccharomyces pombe|chr 2|||Manual
Length = 138
Score = 26.6 bits (56), Expect = 4.1
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Frame = +1
Query: 388 KEKMKDKVNKILAHKCNVFINRQLIYNYPEQLFADAGVMA----IEHADFEGIERLGLVT 555
K K K N+ N R+L Y Q++A M IE A F+G++RLG +
Sbjct: 3 KNKGKGGKNRRRGKNENENEKRELTYAEEGQMYAQVTKMLGNGRIEAACFDGVKRLGHIR 62
Query: 556 G 558
G
Sbjct: 63 G 63
>SPCC1827.05c |||nucleolar RNA-binding protein NIFK
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 276
Score = 25.8 bits (54), Expect = 7.2
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +1
Query: 316 KIKVFGSTIKVDSMAKIAELEVAEKEKMKDKVNKIL-AHK 432
K+K G T++ D A VA K+ K K K+L AHK
Sbjct: 237 KLKELGITLESDVSHPKAASPVASKKSSKKKNKKVLAAHK 276
>SPCC162.09c |hmg1||3-hydroxy-3-methylglutaryl-CoA
reductase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1053
Score = 25.8 bits (54), Expect = 7.2
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +3
Query: 60 RTDHTELKDPFKSQRAFHKISS*CSFAFERI 152
+ D +L +P+++ FH S C F F+ +
Sbjct: 105 KVDVAQLVEPYRNDCIFHDASGACHFFFKEV 135
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 25.8 bits (54), Expect = 7.2
Identities = 29/135 (21%), Positives = 54/135 (40%), Gaps = 4/135 (2%)
Frame = -3
Query: 695 TIVQAEPNATPEKRIKLSSPIRTSSINLQ*PSFTLSGESNVDTISPPVTKPSLSIPSKSA 516
T+V + T + S+PI +SS+ T S N T T + S P S+
Sbjct: 3376 TVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNSSTPITSSTALNTSTPITSS 3435
Query: 515 ----CSIAITPASANNCSG*LYISCLLMKTLHLCAKXXXXXXXXXXXXXXSNSAILAIES 348
S IT +S N S + S +L + + + S+++ S
Sbjct: 3436 TVVNSSTPITSSSVLNSSTAIASSSILNSSTPITSSSVLNSSTPISSSTVITSSVVIGSS 3495
Query: 347 TLIVEPNTLILSVSI 303
+++ ++++ SVS+
Sbjct: 3496 SVLSYASSIVSSVSL 3510
Score = 25.4 bits (53), Expect = 9.5
Identities = 32/132 (24%), Positives = 52/132 (39%), Gaps = 4/132 (3%)
Frame = -3
Query: 695 TIVQAEPNATPEKRIKLSSPIRTSSINLQ*PSFTLSGESNVDT--ISPPVTKPSLSIPSK 522
T+V + T + S+PI +SS+ + T S N T S V S +I S
Sbjct: 3292 TVVNSSTPITSSTTLNTSTPITSSSVLNSSTAITSSTALNTSTPITSSSVLNSSTAITSS 3351
Query: 521 SA--CSIAITPASANNCSG*LYISCLLMKTLHLCAKXXXXXXXXXXXXXXSNSAILAIES 348
S S +T +S N S + S ++ + + + NS+ I S
Sbjct: 3352 SILNSSTPVTSSSVLNSSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS-TPITS 3410
Query: 347 TLIVEPNTLILS 312
+ +V +T I S
Sbjct: 3411 STVVNSSTPITS 3422
>SPAC6B12.04c |||aminotransferase class I and II|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 421
Score = 25.4 bits (53), Expect = 9.5
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +1
Query: 631 LIGDESLIRFSGVALGSACTIV 696
LIGDESLI++S A C V
Sbjct: 261 LIGDESLIKYSAAAHTRICFAV 282
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 25.4 bits (53), Expect = 9.5
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = -3
Query: 686 QAEPNATPEKRIKLSSPIRTSSINLQ*PSFTLSGESNVDTISPPVTKPSL---SIPSKSA 516
Q ++T ++P TSS L S S S + S +T SL SIPS S+
Sbjct: 186 QPSVSSTSSSTFSSAAPTSTSSSYLSSSSVVSSSSSPSSSSSSTLTSSSLSTSSIPSTSS 245
Query: 515 CSIAITPASANNCS 474
S + + + +++ S
Sbjct: 246 SSSSTSSSLSSSSS 259
>SPBC4C3.05c |nuc1|rpa1|DNA-directed RNA polymerase I complex large
subunit Nuc1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1689
Score = 25.4 bits (53), Expect = 9.5
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -1
Query: 283 C*HFLLSLVDVHQLFCLARTL 221
C HF LS V VH FC + L
Sbjct: 106 CHHFKLSKVKVHLFFCRLKLL 126
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 25.4 bits (53), Expect = 9.5
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +1
Query: 70 TLSSKILSNHKEHFTKLAVDAVLRLKGSGNLKAIQIIK 183
T +KILS+H E TK V + GS +L A + K
Sbjct: 2222 TTHAKILSSHPEWDTKAVTLTVSYIPGSISLAAYTVSK 2259
>SPBC21C3.14c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 841
Score = 25.4 bits (53), Expect = 9.5
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = -3
Query: 662 EKRIKLSSPIRTSSINLQ*PSFTLSGESNVDTISPPVTKPSLSIPSKSACSI 507
+K IK + TSS N Q S+T G N + T PS+ IP+ A ++
Sbjct: 604 DKTIKTNQATSTSSSNTQEISYT--GTLNDNINEGLSTFPSIDIPASEADNV 653
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.135 0.368
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,260,774
Number of Sequences: 5004
Number of extensions: 68578
Number of successful extensions: 251
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 241
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 389395636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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