SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0391
         (799 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0339 + 23287620-23287676,23287784-23287849,23287937-232880...   386   e-107
05_07_0067 + 27463703-27463705,27464309-27464365,27464779-274648...   380   e-106
06_03_1193 - 28298656-28298754,28299303-28299377,28299456-282995...   133   2e-31
04_04_0729 + 27612106-27612195,27612284-27612370,27612469-276125...   118   7e-27
02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949    116   3e-26
10_08_0620 - 19321612-19323237                                        108   6e-24
06_03_0477 - 21250811-21250981,21251261-21251374,21251447-212516...    98   8e-21
06_03_0353 + 19810945-19810975,19811308-19811369,19811741-198118...    75   5e-14
02_02_0253 - 8325437-8325628,8325705-8325779,8325933-8326037,832...    70   2e-12
05_01_0337 - 2658647-2658722,2658797-2658915,2658995-2659102,265...    66   3e-11
03_06_0362 + 33379489-33379624,33380161-33380423,33380524-333806...    56   3e-08
09_04_0042 - 14055885-14056142,14057508-14057774,14057859-140592...    54   1e-07
08_02_0864 + 21994286-21994989,21996257-21996958,21997221-219973...    50   2e-06
08_02_0744 - 20659326-20659580,20659748-20660005,20660103-206615...    49   5e-06
06_01_1053 - 8328902-8329156,8330538-8330804,8330895-8332343,833...    48   7e-06
03_03_0266 - 16014740-16015045,16015566-16015601,16015623-160156...    42   4e-04
08_01_0033 + 244930-245105,245297-245344,245835-246539,246652-24...    39   0.005
02_01_0024 + 159595-159801,159892-160017,160201-160338,160431-16...    28   0.026
09_02_0318 - 7191763-7191879,7192375-7192494,7192568-7192666,719...    32   0.61 
02_02_0163 + 7320615-7321673                                           30   1.9  
02_01_0437 + 3171932-3172189,3174102-3174302,3174708-3174989           30   1.9  
10_08_0371 + 17265691-17265788,17265873-17265971,17266586-172666...    30   2.5  
05_03_0582 - 15738503-15739301,15739385-15739642,15740585-157406...    30   2.5  
07_01_0703 - 5295561-5297523,5299344-5299462                           29   3.2  
02_05_0131 + 26098459-26098668,26098788-26098863,26101972-261021...    29   3.2  
04_04_0200 - 23529497-23531938,23532586-23533720,23534272-235344...    29   4.3  
02_01_0038 + 265847-266137,266241-266307,266474-266566,267141-26...    29   4.3  
11_04_0305 - 16162063-16162096,16162282-16164365,16165283-161653...    28   9.9  
07_01_0100 - 748571-748921,751082-752089                               28   9.9  
05_01_0125 - 853691-853984,854027-854659                               28   9.9  

>03_05_0339 +
           23287620-23287676,23287784-23287849,23287937-23288048,
           23288240-23288368,23288795-23288866,23289245-23289360,
           23289494-23289570,23289788-23290273,23290373-23290688,
           23290769-23290915
          Length = 525

 Score =  386 bits (950), Expect = e-107
 Identities = 176/263 (66%), Positives = 229/263 (87%)
 Frame = +1

Query: 1   SFDHQKNLNEASLRVDLENIARTTLSSKILSNHKEHFTKLAVDAVLRLKGSGNLKAIQII 180
           + D+++N+++   R DL NIA TTLSSKILS  KE+F +LAVDAVLRLKGS NL+AIQI+
Sbjct: 138 TMDNKENIDK--FRSDLMNIAMTTLSSKILSQDKEYFAELAVDAVLRLKGSTNLEAIQIL 195

Query: 181 KISGGLLEESFLDEGFLLNKKVGVHQPKKVENANILIANTPMDTDKIKVFGSTIKVDSMA 360
           KI GG L++SFLDEGF+L+KK+G+ QPK++ENA IL+ANT MDTDK+K++G+ ++VDSMA
Sbjct: 196 KIPGGSLKDSFLDEGFILDKKIGLGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMA 255

Query: 361 KIAELEVAEKEKMKDKVNKILAHKCNVFINRQLIYNYPEQLFADAGVMAIEHADFEGIER 540
           K+AE+E AEK+KM++KV KI+ H  N F+NRQLIYN+PE+LFADAG++AIEHADFEGIER
Sbjct: 256 KVAEIEAAEKQKMREKVQKIIGHGINCFVNRQLIYNFPEELFADAGILAIEHADFEGIER 315

Query: 541 LGLVTGGEIVSTFDSPDKVKLGHCKLIEEVLIGDESLIRFSGVALGSACTIVIRGATQQV 720
           L LVTGG+I STFD+P+ VKLGHC +IEE++IG++ LI FSGVA+G ACTIV+RGA++ V
Sbjct: 316 LALVTGGDIASTFDNPESVKLGHCNVIEEIMIGEDKLIHFSGVAMGQACTIVLRGASEHV 375

Query: 721 IDEAERSLHDALCVLAATVKEPK 789
           +DEAERSLHDALCVL+ TV + +
Sbjct: 376 LDEAERSLHDALCVLSQTVNDTR 398


>05_07_0067 +
           27463703-27463705,27464309-27464365,27464779-27464844,
           27464985-27465096,27465281-27465409,27466076-27466191,
           27466364-27466440,27466678-27467163,27467255-27467570,
           27467618-27467797
          Length = 513

 Score =  380 bits (936), Expect = e-106
 Identities = 174/260 (66%), Positives = 221/260 (85%)
 Frame = +1

Query: 10  HQKNLNEASLRVDLENIARTTLSSKILSNHKEHFTKLAVDAVLRLKGSGNLKAIQIIKIS 189
           H   +     R DL NIA TTLSSKILS  KE+F  LAVDAVLRLKGS NL+AIQI+K +
Sbjct: 116 HPMTIIADKFRSDLMNIAMTTLSSKILSQDKEYFAGLAVDAVLRLKGSTNLEAIQILKKT 175

Query: 190 GGLLEESFLDEGFLLNKKVGVHQPKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIA 369
           GG L++SFLDEGF+L+KK+G+ QPK++ENA IL+ANT MDTDK+K++G+ ++VDSMAK+A
Sbjct: 176 GGSLKDSFLDEGFILDKKIGLGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMAKVA 235

Query: 370 ELEVAEKEKMKDKVNKILAHKCNVFINRQLIYNYPEQLFADAGVMAIEHADFEGIERLGL 549
           E+E AEK+KM++KV KI+ H  N F+NRQLIYN+PE+LFADAG++AIEHADFEGIERL L
Sbjct: 236 EIEAAEKQKMREKVQKIIGHGINCFVNRQLIYNFPEELFADAGILAIEHADFEGIERLAL 295

Query: 550 VTGGEIVSTFDSPDKVKLGHCKLIEEVLIGDESLIRFSGVALGSACTIVIRGATQQVIDE 729
           VTGG+I STFD+P+ VKLGHCK+IEE++IG++ LI FSGV +G ACTIV+RGA++ V+DE
Sbjct: 296 VTGGDIASTFDNPESVKLGHCKVIEEIMIGEDRLIHFSGVEMGQACTIVLRGASEHVLDE 355

Query: 730 AERSLHDALCVLAATVKEPK 789
           AERSLHDALCVL+ TV + +
Sbjct: 356 AERSLHDALCVLSQTVNDTR 375


>06_03_1193 -
           28298656-28298754,28299303-28299377,28299456-28299544,
           28299679-28299760,28300385-28300474,28300557-28300655,
           28300733-28300852,28300968-28301084,28301174-28301309,
           28301415-28301584,28301744-28301947,28302032-28302157,
           28302841-28303101,28303215-28303229
          Length = 560

 Score =  133 bits (321), Expect = 2e-31
 Identities = 79/248 (31%), Positives = 123/248 (49%), Gaps = 4/248 (1%)
 Frame = +1

Query: 49  LENIARTTLSSKILSNHKEHFTKLAVDAVLRLKGSGNLKAIQIIKISGGLLEESFLDEGF 228
           L   A TTLSSK++   KE F  + VDAVL +     L  + I K+ GG + +SFL  G 
Sbjct: 158 LAKCAATTLSSKLIGGEKEFFASMVVDAVLAISNDDRLNLLGIKKVPGGTMRDSFLVNGV 217

Query: 229 LLNKKVGV----HQPKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAEKEK 396
              K         QPKK  +  IL+ N  ++    K   + I++    +   +  AE   
Sbjct: 218 AFKKTFSYAGFEQQPKKFLSPKILLLNIELELKSEKE-NAEIRLSDPLQYQSIVDAEWNI 276

Query: 397 MKDKVNKILAHKCNVFINRQLIYNYPEQLFADAGVMAIEHADFEGIERLGLVTGGEIVST 576
           + DK++K +     + ++R  I +   Q FAD  +        E ++R+   TGG + ++
Sbjct: 277 IYDKLDKCVKSGAKIVLSRLAIGDLATQYFADRDIFCAGRVAEEDLQRVAAATGGTVQTS 336

Query: 577 FDSPDKVKLGHCKLIEEVLIGDESLIRFSGVALGSACTIVIRGATQQVIDEAERSLHDAL 756
            ++     LG C++ EE  +G+E    FSG   G   TIV+RG   Q I+EAERSLHDA+
Sbjct: 337 VNNVIDEVLGTCEVFEERQVGNERFNIFSGCPSGQTATIVLRGGADQFIEEAERSLHDAI 396

Query: 757 CVLAATVK 780
            ++   +K
Sbjct: 397 MIVRRALK 404


>04_04_0729 +
           27612106-27612195,27612284-27612370,27612469-27612528,
           27612554-27612688,27612769-27612864,27613149-27613214,
           27613647-27613864,27614093-27614189,27614605-27614691,
           27614892-27615026,27615121-27615225,27615717-27615845,
           27615925-27616028,27616598-27616688,27616774-27616857
          Length = 527

 Score =  118 bits (283), Expect = 7e-27
 Identities = 76/258 (29%), Positives = 134/258 (51%), Gaps = 14/258 (5%)
 Frame = +1

Query: 49  LENIARTTLSSKILSNHKEHFTKLAVDAVLRLKGSGN-------LKAIQIIKISGGLLEE 207
           L N A+T++SSK++++  + F  L VDAV  +K +         +K+I I+K  G   ++
Sbjct: 133 LINCAKTSMSSKLINSDSDFFANLVVDAVQAVKTTNAKGEVKYPIKSINILKAHGKSAKD 192

Query: 208 SFLDEGFLLNK-KVGVHQPKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVA 384
           S+L  G+ LN  +     P +V  A I   +  +   K+++ G  + V    ++ ++   
Sbjct: 193 SYLLNGYALNTGRAAQGMPTRVTPARIACLDFNLQKTKMQL-GVQVLVTDPRELEKIRQR 251

Query: 385 EKEKMKDKVNKILAHKCNVFINRQLIYNYPEQLFADAGVMAIEHADFEGIERLGLVTGGE 564
           E +  K+++ KIL    NV +  + I +   + F +AG +A+     E +  +   TG  
Sbjct: 252 ESDITKERIEKILKAGANVVLTTKGIDDMSLKYFVEAGAIAVRRVRKEDLRHVAKATGAT 311

Query: 565 IVSTF------DSPDKVKLGHCKLIEEVLIGDESLIRFSGVALGSACTIVIRGATQQVID 726
           +VSTF      ++ D   LGH   + E  I D+ +I   G    SA +I++RGA   ++D
Sbjct: 312 MVSTFADMEGEETFDSSFLGHADEVVEERIADDDVILVKGTKNTSAVSIILRGANDFMLD 371

Query: 727 EAERSLHDALCVLAATVK 780
           E +RSLHDALC++  T++
Sbjct: 372 EIDRSLHDALCIVKRTLE 389


>02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949
          Length = 550

 Score =  116 bits (278), Expect = 3e-26
 Identities = 79/259 (30%), Positives = 132/259 (50%), Gaps = 13/259 (5%)
 Frame = +1

Query: 28  EASLRVDLENIARTTLSSKILSNHKEHFTKLAVDAVLRLKGSGN-----LKAIQIIKISG 192
           E S R  L   A T L+SK++S +    + LAVDA L +    +     L+ I+++K  G
Sbjct: 150 ELSDRDSLVKSASTALNSKVVSQYSSLLSPLAVDAALSVVDPAHPDLLDLRDIRVVKKLG 209

Query: 193 GLLEESFLDEGFLLNKKVG--VHQPKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKI 366
           G ++++ L  G + +KK       P +VENA I +    +   K  +  S I V   A++
Sbjct: 210 GTVDDTELIRGLIFDKKASHAAGGPTRVENAKIAVIQFQVSPPKTDIEQSVI-VSDYAQM 268

Query: 367 AELEVAEKEKMKDKVNKILAHKCNVF-----INRQLIYNYPEQLFADAGVMAIEHADFEG 531
             +   E+  +   V KI A  CNV      I R  + +      A A ++ ++  + + 
Sbjct: 269 DRILREERNYILGMVKKIKASGCNVLLIQKSILRDAVTDLSLHYLAKAKILVVKDVERDE 328

Query: 532 IERLGLVTGGEIVSTFDSPDKVKLGHCKLIEEVLIGDESLIRFSGVA-LGSACTIVIRGA 708
           IE +        ++  +   + KLG+  L+EEV +G+  +++  G+  +G   T+++RG+
Sbjct: 329 IEFITKTLNCLPIANIEHFREDKLGYADLVEEVSVGESKIVKIMGIKDMGRTATVLVRGS 388

Query: 709 TQQVIDEAERSLHDALCVL 765
            Q VIDEAERSLHDALCV+
Sbjct: 389 NQLVIDEAERSLHDALCVI 407


>10_08_0620 - 19321612-19323237
          Length = 541

 Score =  108 bits (259), Expect = 6e-24
 Identities = 77/268 (28%), Positives = 134/268 (50%), Gaps = 16/268 (5%)
 Frame = +1

Query: 28  EASLRVDLENIARTTLSSKILSNHKEHFTKLAVDAVLRLKGSGN-----LKAIQIIKISG 192
           E S R  L   A T L+SK++S +    + LAVDA L +    +     L+ I+++K  G
Sbjct: 154 ELSDRDALVKSASTALNSKVVSQYSTLLSPLAVDAALAVVDPAHPYLLDLRDIRVVKKLG 213

Query: 193 GLLEESFLDEGFLLNKKVG--VHQPKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKI 366
             ++++ L  G +LNKK       P ++ +A I +    +   K  +  S + V   A++
Sbjct: 214 CTVDDTELIRGLVLNKKASHVAGGPTRIGDAKIAVIQFQVSPPKTDIEHSVV-VSDYAQM 272

Query: 367 AELEVAEKEKMKDKVNKILAHKCNVF-----INRQLIYNYPEQLFADAGVMAIEHADFEG 531
             +   E+  +   V KI A  CNV      I R  + +      A A +M ++  + + 
Sbjct: 273 DRILREERNYILGMVKKIKASGCNVLLIQKSILRDSVTDLSLHYLAKAKIMVVKDVERDE 332

Query: 532 IERLGLVTGGEIVSTFDSPDKVKLGHCKLIEEVLIGD---ESLIRFSGVA-LGSACTIVI 699
           IE +        +++ +   + KLGH  L+EE+ +GD     +++ +G+  +G   T+++
Sbjct: 333 IEFITKTLNCMPIASIEHLREDKLGHAHLVEEISVGDGNNNKIVKITGIKNMGRTATVLV 392

Query: 700 RGATQQVIDEAERSLHDALCVLAATVKE 783
           RG+ Q VIDEA+RSLHDA CV+   V +
Sbjct: 393 RGSNQMVIDEAQRSLHDAFCVIRCLVNK 420


>06_03_0477 -
           21250811-21250981,21251261-21251374,21251447-21251613,
           21252051-21252153,21252315-21252367,21252438-21252570,
           21252835-21253183,21253685-21254003,21254519-21254717
          Length = 535

 Score = 97.9 bits (233), Expect = 8e-21
 Identities = 76/266 (28%), Positives = 127/266 (47%), Gaps = 12/266 (4%)
 Frame = +1

Query: 1   SFDHQKNLNE----ASLRVD-LENIARTTLSSKILSNHKEHFTKLAVDAVLRL----KGS 153
           +FDH ++++     ++  ++ L     TTLSSKI++  K    ++AV AVL +    +  
Sbjct: 140 AFDHLEHISHKFEFSATNIEPLVQTCMTTLSSKIVNRCKRTLAEIAVKAVLAVADLERKD 199

Query: 154 GNLKAIQIIKISGGLLEESFLDEGFLLNKKVGVHQ-PKKVENANILIANTPMDTDKIKVF 330
            NL  I++    GG LE++ L  G +++K +   Q PK++E+A I I   P +  K K  
Sbjct: 200 VNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKRIEDAKIAILTCPFEPPKPKT- 258

Query: 331 GSTIKVDSMAKIAELEVAEKEKMKDKVNKILAHKCNVFINRQLIYNYPEQLFADAGVMAI 510
              + +D++ K   L   E++   + V K       + I +    +    L     + A+
Sbjct: 259 KHKVDIDTVEKFQMLREQEQKYFDEMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAV 318

Query: 511 EHADFEGIERLGLVTGGEIVSTFDSPDKVKLGHCKLIEEVLIGD--ESLIRFSGVALGSA 684
                  +E + + TGG IV  F      KLG   ++ E   G   + ++     A   A
Sbjct: 319 RWVGGVELELIAIATGGRIVPRFQELSPEKLGKAGIVREKSFGTTKDRMLYIEQCANSRA 378

Query: 685 CTIVIRGATQQVIDEAERSLHDALCV 762
            TI IRG  + +I+E +RSLHDALCV
Sbjct: 379 VTIFIRGGNKMMIEETKRSLHDALCV 404


>06_03_0353 +
           19810945-19810975,19811308-19811369,19811741-19811813,
           19813292-19813359,19813496-19813565,19813908-19813976,
           19814065-19814136,19814247-19814320,19814420-19814697,
           19814804-19815188,19815268-19815393,19815583-19815687,
           19815986-19815994,19817040-19817114,19817202-19817390
          Length = 561

 Score = 75.4 bits (177), Expect = 5e-14
 Identities = 58/214 (27%), Positives = 103/214 (48%), Gaps = 5/214 (2%)
 Frame = +1

Query: 163 KAIQIIKISGGLLEESFLDEGFLLNKKVGV--HQPKKVENANILIANTPMDTDK--IKVF 330
           K I++ K+ GG LE+S + +G + NK V       +K+ N  I++ + P++  K   +  
Sbjct: 198 KYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILLDCPVEYKKGENQTN 257

Query: 331 GSTIKVDSMAKIAELEVAEKEKMKDKVNKILAHKCNVFINRQLIYNYPEQLFADAGVMAI 510
              +K +    + E+E   +E +K+   +IL  K ++ +  + + +      + AGV AI
Sbjct: 258 AELMKEEDWQVLLEME---EEYIKNLCAQILKFKPDLVVTEKGLSDLAIHYLSKAGVSAI 314

Query: 511 EHADFEGIERLGLVTGGEIVSTFDSPDKVKLG-HCKLIEEVLIGDESLIRFSGVALGSAC 687
                    R+    G  IV+  +   +  +G    L E   IGDE            AC
Sbjct: 315 RRLRKTDNNRIAKACGAVIVNRPEELQESDVGTRAGLFEVKKIGDEFFTFIVDCKDPKAC 374

Query: 688 TIVIRGATQQVIDEAERSLHDALCVLAATVKEPK 789
           T+++RGA++ V++E ER+L DA+ V    +K PK
Sbjct: 375 TVLLRGASKDVLNEVERNLQDAMSVARNILKNPK 408


>02_02_0253 -
           8325437-8325628,8325705-8325779,8325933-8326037,
           8326249-8326374,8326451-8326835,8326931-8327208,
           8327294-8327367,8327476-8327547,8327637-8327705,
           8340132-8340201,8340806-8340873,8341571-8341643,
           8341807-8341868,8342168-8342198
          Length = 559

 Score = 69.7 bits (163), Expect = 2e-12
 Identities = 66/264 (25%), Positives = 118/264 (44%), Gaps = 14/264 (5%)
 Frame = +1

Query: 40  RVDLENIARTTLSSKILSNHKEHFTKLAVDAVLRLK---GSGNL-----KAIQIIKISGG 195
           RV +  + ++++ +K      +    LA+DA        G G       K I++ K+ GG
Sbjct: 149 RVAMLGLVKSSIGTKFTGQFGDLIADLAIDATTTAGVDLGQGIREVDIKKYIKVEKVPGG 208

Query: 196 LLEESFLDEGFLLNKKVGV--HQPKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIA 369
            LE+S + +G ++NK V       +K+ N  I++ + P++  K    G       + K  
Sbjct: 209 QLEDSKVLKGVMINKDVVAPGKMRRKIVNPRIILLDCPLEYKK----GENQTNAELMKEE 264

Query: 370 ELEVA---EKEKMKDKVNKILAHKCNVFINRQLIYNYPEQLFADAGVMAIEHADFEGIER 540
           + +V    E+E +++   +IL  K ++ I  + + +        AGV AI         R
Sbjct: 265 DWQVMLQMEEEYIENLCAQILKFKPDLVITEKGLSDLAVHYLGKAGVSAIRRLRKTDNNR 324

Query: 541 LGLVTGGEIVSTFDSPDKVKLGH-CKLIEEVLIGDESLIRFSGVALGSACTIVIRGATQQ 717
           +    G  IV+  +   +  +G    L E    GDE            ACT+++RGA++ 
Sbjct: 325 IAKACGAVIVNRPEELQESDVGTGAGLFEVKKFGDEFFAFIVDCKDPKACTVLLRGASKD 384

Query: 718 VIDEAERSLHDALCVLAATVKEPK 789
           V++E ER+L DA+ +     K PK
Sbjct: 385 VLNEVERNLQDAMSMARNIWKNPK 408


>05_01_0337 -
           2658647-2658722,2658797-2658915,2658995-2659102,
           2659187-2659255,2659561-2659655,2659740-2659944,
           2660125-2660211,2660291-2660405,2660696-2660802,
           2661054-2661146,2661243-2661290,2661345-2661544,
           2661993-2662128,2662228-2662291,2662779-2662912
          Length = 551

 Score = 66.1 bits (154), Expect = 3e-11
 Identities = 63/254 (24%), Positives = 118/254 (46%), Gaps = 14/254 (5%)
 Frame = +1

Query: 64  RTTLSSKILSNHKEHFTKLAVDAVLRLKGSG---NLKAIQIIKISGGLLEESFLDEGFLL 234
           + +L  ++     +  T + V+AVL ++      +L  ++I+ +      ++ L EG +L
Sbjct: 172 KLSLLGQLYEGLADQLTDIVVNAVLCIRKPDEPIDLFMVEIMHMRHKFDVDTRLVEGLVL 231

Query: 235 NKKVGVHQP---KKVENANILIANTPMDTDKIKV-----FGSTIKVDSMAKIAELEVAEK 390
           +   G   P   ++ EN  IL  N  ++ +K ++     + +  + + M      +V E+
Sbjct: 232 DH--GSRHPDMKRRAENCYILTCNVSLEYEKSEINAGFFYSNAEQREKMVAAERRQVDER 289

Query: 391 EK-MKDKVNKILA--HKCNVFINRQLIYNYPEQLFADAGVMAIEHADFEGIERLGLVTGG 561
            K + +  NK+ A   K  V IN++ I      L A AG++ +  A    +ERL L  GG
Sbjct: 290 VKRIIELKNKVCAGNDKNFVVINQKGIDPPSLDLLARAGIIGLRRAKRRNMERLVLACGG 349

Query: 562 EIVSTFDSPDKVKLGHCKLIEEVLIGDESLIRFSGVALGSACTIVIRGATQQVIDEAERS 741
           E V + D   +  LG   L+ E  +G+E       V    +CTI+I+G     I + + +
Sbjct: 350 EAVDSVDDLTEDCLGWAGLVYEHTLGEEKYTFIENVKNPRSCTILIKGPNDHTIAQIKDA 409

Query: 742 LHDALCVLAATVKE 783
           + D L  +  TV++
Sbjct: 410 VRDGLRSVKNTVED 423


>03_06_0362 +
           33379489-33379624,33380161-33380423,33380524-33380670,
           33380753-33380914,33381681-33381758,33382329-33382462,
           33382702-33382774,33382852-33382929,33383002-33383124,
           33383223-33383317,33383723-33383932,33384115-33384172,
           33384268-33384333
          Length = 540

 Score = 56.0 bits (129), Expect = 3e-08
 Identities = 43/201 (21%), Positives = 87/201 (43%), Gaps = 1/201 (0%)
 Frame = +1

Query: 157 NLKAIQIIKISGGLLEESFLDEGFLLNKKVGVHQPKKVENANILIANTPMDTDKIKVFGS 336
           N+  +++ K+ GG L  S +  G +L K   V   K+VE A I +    +DT   +  G 
Sbjct: 196 NVDNVRVAKLLGGGLHNSSVVRGMVL-KNDAVGSIKRVEKAKIAVFAGGVDTSATETKG- 253

Query: 337 TIKVDSMAKIAELEVAEKEKMKDKVNKILAHKCNVFINRQLIYNYPEQLFADAGVMAIEH 516
           T+ + S  ++      E+ K+++ +  +      V ++   + +          +M +  
Sbjct: 254 TVLIHSAEQLENYAKTEEAKVEELIKAVADSGAKVIVSGAAVGDMALHFCERYKLMVLRI 313

Query: 517 ADFEGIERLGLVTGGEIVSTFDSPDKVKLGHCKLIEEVLIGDESLIRFSGVALG-SACTI 693
           +    + R    TG   +     P+  +LG+   +    IG   +        G S  T+
Sbjct: 314 SSKFELRRFCRTTGSIALLKLSRPNADELGYADSVSVEEIGGARVTVVKNEEGGNSVATV 373

Query: 694 VIRGATQQVIDEAERSLHDAL 756
           V+RG+T  ++D+ ER++ D +
Sbjct: 374 VLRGSTDSILDDLERAVDDGV 394


>09_04_0042 -
           14055885-14056142,14057508-14057774,14057859-14059292,
           14059378-14059539,14059642-14059768,14059869-14060200,
           14060289-14061083,14061379-14061714,14061791-14062730,
           14063338-14063588
          Length = 1633

 Score = 54.0 bits (124), Expect = 1e-07
 Identities = 44/178 (24%), Positives = 85/178 (47%), Gaps = 11/178 (6%)
 Frame = +1

Query: 271 ENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAEKEKMKDKVNKILAHKCNVFIN 450
           +NA +LI    ++  K+         + +A I  +   EKE ++  V KI + + NV + 
Sbjct: 368 QNATLLILGGALEYQKVS--------NKLASIGTILEQEKEHLRMIVGKIESRRPNVLLV 419

Query: 451 RQLIYNYPEQLFADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGHCKL--IE 624
            + + ++ ++L A   +  + +     ++R+   TGG+I S+ D+    +LGHC    +E
Sbjct: 420 EKSVSSFAQELLAK-DISLVLNVKRPLLDRISRCTGGQIASSIDNIASARLGHCDTFKVE 478

Query: 625 EVLIGD---------ESLIRFSGVALGSACTIVIRGATQQVIDEAERSLHDALCVLAA 771
           +VL            ++L+ F G      CT+++RGA +  +   +R +   L V AA
Sbjct: 479 KVLESSTEHSEKKSTKTLMFFEGCMKRLGCTVLLRGACRDELKRIKRVMQ--LAVFAA 534


>08_02_0864 + 21994286-21994989,21996257-21996958,21997221-21997374,
            21997494-21997838,21998323-21999240,21999312-21999640,
            21999709-21999832,21999901-22000071,22000188-22001648,
            22002647-22002910,22003866-22004189
          Length = 1831

 Score = 50.4 bits (115), Expect = 2e-06
 Identities = 48/194 (24%), Positives = 87/194 (44%), Gaps = 14/194 (7%)
 Frame = +1

Query: 169  IQIIKISGGLLEESFLDEGFLLNKKVGVHQ-PKKVENANILIANTPMDTDKIKVFGSTIK 345
            +++  ++ G   +SF+ +G +  K V   +   + E   ILI    ++  +I    S+  
Sbjct: 456  VKVKCLACGRPSDSFVVKGVVCKKNVAHRRMASRKEKPRILILGGALEYQRISNLLSSF- 514

Query: 346  VDSMAKIAELEVAEKEKMKDKVNKILAHKCNVFINRQLIYNYPEQLFADAGVMAIEHADF 525
             D++ +       E + +K  V KI AH+ +V +  + +  Y + LF +  +  + +   
Sbjct: 515  -DTLLQ------QETDYLKMAVAKIKAHQPSVVLVEKSVSRYAQDLFLEKNISLVLNIKR 567

Query: 526  EGIERLGLVTGGEIVSTFDSPDKVKLGHC------KLIEEVLIGDE-------SLIRFSG 666
              +ER+   TG  IV + D     KLGHC      K +EE     E       +L+ F G
Sbjct: 568  PLLERISRCTGAHIVPSIDYVSSQKLGHCDLFHVEKYVEEHGTAGEGGKKMLKTLMFFEG 627

Query: 667  VALGSACTIVIRGA 708
                  CTI+++GA
Sbjct: 628  CPKPLGCTILLKGA 641


>08_02_0744 -
           20659326-20659580,20659748-20660005,20660103-20661575,
           20661677-20661835,20661948-20662074,20662155-20662486,
           20662574-20663383,20663772-20664110,20664187-20664340,
           20664427-20665143,20665699-20665967
          Length = 1630

 Score = 48.8 bits (111), Expect = 5e-06
 Identities = 55/226 (24%), Positives = 106/226 (46%), Gaps = 17/226 (7%)
 Frame = +1

Query: 145 KGSGNLKAIQIIKI---SGGLLEESFLDEGFLLNKKVGVHQPKKVE--NANILIANTPMD 309
           K  G++     +K+   + G   +S L  G + +K V  H+    E  NA +LI    ++
Sbjct: 305 KKGGSMDPTDYVKVKCLASGDPSDSNLVRGVVCSKNVK-HKRMASEHVNAKLLILGGALE 363

Query: 310 TDKIKVFGSTIKVDSMAKIAELEVAEKEKMKDKVNKILAHKCNVFINRQLIYNYPEQLFA 489
             K+     T K+ S+  I E    EKE ++  V KI + + NV +  + + +Y ++L A
Sbjct: 364 YQKV-----TNKLASIDTILE---QEKEHLRAIVAKIESRRPNVLLVEKSVSSYAQELLA 415

Query: 490 DAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGHCKL-----IEEVLIGDE--- 645
              +  + +     ++R+   +G +I S+ D+    +LG C+L     + E   G +   
Sbjct: 416 K-DISLVLNVKRPLLDRISRCSGAQIASSIDNIASARLGQCELFKVHKVSEFSSGKQTNR 474

Query: 646 ----SLIRFSGVALGSACTIVIRGATQQVIDEAERSLHDALCVLAA 771
               +L+ F G      CT+++RG+ ++ + + +R +   L V AA
Sbjct: 475 RSMKTLMFFEGCPRRLGCTVLLRGSCREELKKIKRVVQ--LAVFAA 518


>06_01_1053 -
           8328902-8329156,8330538-8330804,8330895-8332343,
           8332461-8332619,8333246-8333372,8333444-8333775,
           8333859-8334593,8334735-8335073,8335160-8335313,
           8335405-8336154,8336242-8336372
          Length = 1565

 Score = 48.4 bits (110), Expect = 7e-06
 Identities = 49/209 (23%), Positives = 93/209 (44%), Gaps = 13/209 (6%)
 Frame = +1

Query: 169 IQIIKISGGLLEESFLDEGFLLNKKVG-VHQPKKVENANILIANTPMDTDKIKVFGSTIK 345
           +++  ++ G   +S   +G + +K V       K EN  +L+    ++  K         
Sbjct: 281 VKVKCVASGNPNDSTFIKGVVCSKNVKHKRMVSKHENPRLLLLGGALEHQKAS------- 333

Query: 346 VDSMAKIAELEVAEKEKMKDKVNKILAHKCNVFINRQLIYNYPEQLFADAGVMAIEHADF 525
            + +A I  +   EKE +K  V KI A + +V +  + +  Y +QL A   +  + +   
Sbjct: 334 -NKLASINSILEQEKEYLKIAVAKIEAQRPHVLLVEKSVPLYAQQLLAK-DISLVLNVKR 391

Query: 526 EGIERLGLVTGGEIVSTFDSPDKVKLGHCKL--IEEVLIGD----------ESLIRFSGV 669
             +ER+   TG +I S+ ++   V+LG C+   IE V              ++L+ F G 
Sbjct: 392 SLLERISRCTGAQIASSIENVTSVRLGQCQTFWIERVSESSSPKNANKKSAKTLMFFDGC 451

Query: 670 ALGSACTIVIRGATQQVIDEAERSLHDAL 756
                CTI++RG + + +   + +L  AL
Sbjct: 452 PRRLGCTILLRGTSHEELRRVKLALQFAL 480


>03_03_0266 -
           16014740-16015045,16015566-16015601,16015623-16015643,
           16016331-16016591,16017504-16018985,16019834-16019989,
           16020154-16020277,16020399-16020615,16020877-16021774,
           16022947-16023291,16023371-16023565,16023751-16024453,
           16024866-16025467
          Length = 1781

 Score = 42.3 bits (95), Expect = 4e-04
 Identities = 23/90 (25%), Positives = 42/90 (46%)
 Frame = +1

Query: 349 DSMAKIAELEVAEKEKMKDKVNKILAHKCNVFINRQLIYNYPEQLFADAGVMAIEHADFE 528
           + ++ I  L   E + +K  V KI+A K N+ +    +  Y + L  +  +  + +    
Sbjct: 489 NQLSSIDTLLQQETDHLKMAVAKIVAQKPNLLLVEHTVSRYAQDLLLEKNISLVLNIKRP 548

Query: 529 GIERLGLVTGGEIVSTFDSPDKVKLGHCKL 618
            ++R+   T   IV + D     KLGHC+L
Sbjct: 549 LLDRIARCTNAHIVPSIDLLPSQKLGHCEL 578


>08_01_0033 +
           244930-245105,245297-245344,245835-246539,246652-246796,
           246893-247240,247882-248721,248786-248832,249470-249596,
           249672-249836,249973-251370,251453-251713,251802-252161
          Length = 1539

 Score = 38.7 bits (86), Expect = 0.005
 Identities = 33/135 (24%), Positives = 60/135 (44%), Gaps = 14/135 (10%)
 Frame = +1

Query: 385 EKEKMKDKVNKILAH-KCNVFINRQLIYNYPEQLFADAGVMAIEHADFEGIERLGLVTGG 561
           EK+ ++  ++K++     NV +  + +    ++L    GV  I       +ER+   TG 
Sbjct: 359 EKDHLERAISKMMEICSPNVILVEKTVSRDIQELLLKEGVTLIFDMKLNRLERIARCTGS 418

Query: 562 EIVSTFDSPDKVKLGHC------KLIEEVLIGDE-------SLIRFSGVALGSACTIVIR 702
            I+S  +  DK KL  C      K IEE     +       +L+   G      CTI++R
Sbjct: 419 PIISFSEVLDKPKLKRCDSFHIEKFIEEHNSASDGGKRLSKTLMFLEGFPKPLGCTILLR 478

Query: 703 GATQQVIDEAERSLH 747
           GA  + + + ++ +H
Sbjct: 479 GANSEELKKVKQVMH 493


>02_01_0024 +
           159595-159801,159892-160017,160201-160338,160431-160526,
           160958-161200,161249-161537,161612-161781,161975-162052,
           162156-162227,162345-162449,162555-162647,162737-162829,
           163109-163235,163317-163330
          Length = 616

 Score = 28.3 bits (60), Expect(2) = 0.026
 Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 13/150 (8%)
 Frame = +1

Query: 16  KNLNEA-SLRVDLENIARTTLSSKILSNHKEHFTKLAVDAVLRLKGSGNLKAIQIIKISG 192
           K +N A  L   LE+  R      I++   E    LA   V RL+G+  LK I  IK  G
Sbjct: 294 KKINNARDLITILEDAIRGGYPILIVTEDIEQ-EALATLVVNRLRGA--LK-IAAIKAPG 349

Query: 193 -GLLEESFLDE------GFLLNKKVGVHQPKKVENANILIANTPMDTDKIKVFGSTIKVD 351
            G  +  +LD+      G ++ ++VG+   K   +     A   +  D   + G     D
Sbjct: 350 FGERKSQYLDDIATLTGGTVIREEVGLSLDKADRDVLGTAAKVVVTKDSTTIVGDGTTQD 409

Query: 352 SMAKIA-----ELEVAEKEKMKDKVNKILA 426
            + K       ++EVAE+E  K+K+N+ +A
Sbjct: 410 EVNKRVTQIKNQIEVAEQEYEKEKLNERIA 439



 Score = 27.1 bits (57), Expect(2) = 0.026
 Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
 Frame = +1

Query: 535 ERLGLVTGGEIVSTFDSPDKVKLGHCKL-IEEVLIGDESLIRFSGVALGSACTIV-IRGA 708
           ER+  ++GG  V    +  + +L   KL +E+ L   ++ +   G+ +G  CT++ +   
Sbjct: 436 ERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVE-EGIVVGGGCTLLRLASK 494

Query: 709 TQQVIDEAERSLHDALCVLAATVKEPKSY 795
              +I+  E   +D   V A  V++  SY
Sbjct: 495 VDAIIETLE---NDEQKVGAEIVRKSLSY 520


>09_02_0318 -
           7191763-7191879,7192375-7192494,7192568-7192666,
           7192846-7192957,7193058-7193161,7193341-7193520,
           7193611-7193880,7194364-7194660,7195283-7195477
          Length = 497

 Score = 31.9 bits (69), Expect = 0.61
 Identities = 18/47 (38%), Positives = 27/47 (57%)
 Frame = +1

Query: 256 QPKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAEKEK 396
           Q  +  NA+I +A  PMD ++   FG  +K+D   +I  +E AEK K
Sbjct: 203 QAHRETNADITVAALPMDEERATAFG-LMKIDDEGRI--IEFAEKPK 246


>02_02_0163 + 7320615-7321673
          Length = 352

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 18/74 (24%), Positives = 30/74 (40%)
 Frame = -3

Query: 719 TCCVAPRITIVQAEPNATPEKRIKLSSPIRTSSINLQ*PSFTLSGESNVDTISPPVTKPS 540
           +CC    +  V   P A P    +L+S    +++ L       SG   +  + PP T P 
Sbjct: 20  SCCALVLLATVLLLPRAPPAAPEQLASAAAAAAVRLDARVERRSGNEVLWQLPPPTTPPR 79

Query: 539 LSIPSKSACSIAIT 498
            ++     C+I  T
Sbjct: 80  AAVFVAPGCTIRAT 93


>02_01_0437 + 3171932-3172189,3174102-3174302,3174708-3174989
          Length = 246

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 12/22 (54%), Positives = 17/22 (77%)
 Frame = +1

Query: 721 IDEAERSLHDALCVLAATVKEP 786
           I+EAERSLH A+ +++  VK P
Sbjct: 107 IEEAERSLHGAIIIVSRAVKNP 128


>10_08_0371 +
           17265691-17265788,17265873-17265971,17266586-17266628,
           17267250-17267321,17267400-17267495,17267609-17267842,
           17267914-17268097,17268247-17268358,17268447-17268533,
           17268703-17268841,17269628-17269718,17270045-17270154,
           17270309-17270413,17270982-17271055,17271379-17271454,
           17271786-17272022,17272419-17272490,17273082-17273153,
           17273240-17273304,17273306-17273383,17273384-17273486,
           17273769-17273858,17274873-17274980,17275063-17275113,
           17276126-17276203,17276284-17276346,17276944-17277140,
           17277243-17277312,17277640-17277828
          Length = 1030

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -2

Query: 738 TLSFVDNLLRGTTDYDRASRAQRYTREADQALITNQN 628
           T S  DNLL+ T +Y   +     T EA ++ + NQN
Sbjct: 330 TCSLFDNLLKSTRNYGTINLLSALTSEAVKSFLDNQN 366


>05_03_0582 -
           15738503-15739301,15739385-15739642,15740585-15740670,
           15740879-15740960,15741044-15741213,15742081-15742194,
           15742984-15743082,15743171-15743249,15744604-15744710
          Length = 597

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = -3

Query: 641 SPIRTSSINLQ*PSFTLSGESNVDTISPPVTKPSLSIPSKSA 516
           S + TS         T SG S   T+SPPV   +L++P   A
Sbjct: 346 SGVATSLSTAHDDEITSSGSSGTSTVSPPVQSHALALPDPPA 387


>07_01_0703 - 5295561-5297523,5299344-5299462
          Length = 693

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +1

Query: 346 VDSMAKIAELEVAEKEKMKDKVNKILAHKCNVFINRQLIYN 468
           +D +A+   L V + +  KD  NK + H C +F+ R L  N
Sbjct: 339 LDCLAEFTLLRVLDLQDCKDLQNKHMKHVCQLFLLRFLSLN 379


>02_05_0131 +
           26098459-26098668,26098788-26098863,26101972-26102178,
           26102311-26102435,26102740-26102900,26102977-26103067,
           26103161-26103310,26103396-26103632
          Length = 418

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 5/105 (4%)
 Frame = +1

Query: 247 GVHQPKKVENANILIANTPMDTDKI--KVFGSTIKVDSMAKIAELEVAEKEKMKDKVNKI 420
           G   PKK+     L+ N P D+D +  +VFG  + + ++ KI +  +A   K K K   +
Sbjct: 253 GYMDPKKLNIEPTLLLNPPADSDVMTEEVFGPILPIITVKKIEDC-IAYL-KSKPKPIAM 310

Query: 421 LAHKCNVFINRQLI--YNYPEQLFADAGVM-AIEHADFEGIERLG 546
            A   N  + R+++   +     F DA V  A+E   F G+   G
Sbjct: 311 YAFTNNERLKRRIVEETSSGSVTFNDAVVQYALESVPFGGVGHSG 355


>04_04_0200 - 23529497-23531938,23532586-23533720,23534272-23534463,
            23535527-23535570
          Length = 1270

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = -3

Query: 662  EKRIKLSSPIRTSSINLQ*PSFTLSGESNVDTISPPVTKPSLSIPSKSAC 513
            + R   S P   S+++L      +SG SN +T S P+ +    +P KS C
Sbjct: 900  DSRTNRSEP-GPSTVSLPTVEERVSGSSNQETKSTPLAREGEQLPEKSCC 948


>02_01_0038 +
           265847-266137,266241-266307,266474-266566,267141-267193,
           267579-267662,267874-267924,268021-268131,268467-268556
          Length = 279

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 35/149 (23%), Positives = 65/149 (43%)
 Frame = +1

Query: 334 STIKVDSMAKIAELEVAEKEKMKDKVNKILAHKCNVFINRQLIYNYPEQLFADAGVMAIE 513
           S+ K D++A    L +  KE+ +    +   H+  VF   ++       +FA+  +MAIE
Sbjct: 79  SSAKADALAAFPSLTLNAKEEFEWLKKEYTVHEQVVFGKIKVT------VFAEGAIMAIE 132

Query: 514 HADFEGIERLGLVTGGEIVSTFDSPDKVKLGHCKLIEEVLIGDESLIRFSGVALGSACTI 693
           H    GI        G ++  F  P    +   + +  + +  E+L+  SG+  G     
Sbjct: 133 H---PGIAAGSTAIAGIVL--FKRPRSYLI---QRVRRIFVSKETLL--SGIQAG---VN 179

Query: 694 VIRGATQQVIDEAERSLHDALCVLAATVK 780
            +R     V +E+++ LH   C+L +  K
Sbjct: 180 HMRQTVNLVSNESQKLLHWICCLLVSGKK 208


>11_04_0305 -
           16162063-16162096,16162282-16164365,16165283-16165351,
           16168317-16169288,16169548-16169650,16170427-16170509
          Length = 1114

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 17/55 (30%), Positives = 28/55 (50%)
 Frame = +1

Query: 49  LENIARTTLSSKILSNHKEHFTKLAVDAVLRLKGSGNLKAIQIIKISGGLLEESF 213
           LEN++ ++ ++K     KEH   L +    RL   G LK   + ++   L+EE F
Sbjct: 773 LENVSASSYAAKASLCTKEHLIFLKLRCTSRLGDDGLLKEEGLSEMEQRLVEEVF 827


>07_01_0100 - 748571-748921,751082-752089
          Length = 452

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 17/34 (50%), Positives = 18/34 (52%), Gaps = 4/34 (11%)
 Frame = -1

Query: 760 RKAHHGV----NAQLRR*LVAWHHGLRSCKPSPT 671
           R AH GV    N   RR L+A H GL    PSPT
Sbjct: 110 RLAHDGVVYFRNTMSRRRLMAPHRGLGLASPSPT 143


>05_01_0125 - 853691-853984,854027-854659
          Length = 308

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 20/65 (30%), Positives = 33/65 (50%)
 Frame = -3

Query: 293 AIRMLAFSTFFG*CTPTFLFSKNPSSKNDSSRRPPDILIIWIAFKLPDPFKRKTASTANF 114
           A+R+ A S  +     +  F     ++  ++RR P++L     F  P+P  R+T+ST  F
Sbjct: 43  AVRLRAVSRDWNAALTSDYFILAHRARAAAARRHPELLF----FAPPEP--RRTSSTTTF 96

Query: 113 VKCSL 99
             CSL
Sbjct: 97  YACSL 101


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.317    0.135    0.368 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,365,679
Number of Sequences: 37544
Number of extensions: 415208
Number of successful extensions: 1168
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1155
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2162420256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -