Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0391
(799 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8111| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0) 393 e-110
SB_54147| Best HMM Match : No HMM Matches (HMM E-Value=.) 113 2e-25
SB_52637| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0) 97 1e-20
SB_57454| Best HMM Match : DUF924 (HMM E-Value=1) 93 3e-19
SB_3351| Best HMM Match : No HMM Matches (HMM E-Value=.) 78 1e-14
SB_56828| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 9e-11
SB_53295| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 4e-10
SB_30876| Best HMM Match : Ribosomal_S16 (HMM E-Value=7.1) 59 4e-09
SB_49103| Best HMM Match : Cpn60_TCP1 (HMM E-Value=2.5e-05) 58 6e-09
SB_5310| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_37504| Best HMM Match : PIP5K (HMM E-Value=0) 45 6e-05
SB_37965| Best HMM Match : TIR (HMM E-Value=3.3) 42 8e-04
SB_25100| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_17755| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_30391| Best HMM Match : SpoVG (HMM E-Value=6.4) 33 0.20
SB_30399| Best HMM Match : ERM (HMM E-Value=0.37) 33 0.35
SB_26565| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.47
SB_59319| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_49341| Best HMM Match : Rad21_Rec8_N (HMM E-Value=2.3) 30 1.9
SB_43283| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_50789| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_57181| Best HMM Match : bZIP_1 (HMM E-Value=0.19) 29 4.4
SB_27444| Best HMM Match : Phage_integrase (HMM E-Value=0.0013) 29 5.8
SB_3960| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.8
SB_43495| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.8
SB_13397| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_11721| Best HMM Match : Peptidase_C12 (HMM E-Value=0) 28 7.6
SB_8887| Best HMM Match : G-patch (HMM E-Value=1.2e-08) 28 7.6
>SB_8111| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0)
Length = 531
Score = 393 bits (968), Expect = e-110
Identities = 192/251 (76%), Positives = 216/251 (86%)
Frame = +1
Query: 40 RVDLENIARTTLSSKILSNHKEHFTKLAVDAVLRLKGSGNLKAIQIIKISGGLLEESFLD 219
R DL NIARTTLSSKIL H++HF KLAVDAVLRLKGSG+L AIQIIK GG + +SFLD
Sbjct: 153 REDLMNIARTTLSSKILVQHRDHFAKLAVDAVLRLKGSGDLNAIQIIKKLGGGMVDSFLD 212
Query: 220 EGFLLNKKVGVHQPKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAEKEKM 399
EGFLL+KK+GV+QPKK+ENA ILIANTPMD DKIKVFGS ++VDS AKIA+LE+AEK+KM
Sbjct: 213 EGFLLDKKIGVNQPKKIENAKILIANTPMDADKIKVFGSRVRVDSTAKIADLEMAEKQKM 272
Query: 400 KDKVNKILAHKCNVFINRQLIYNYPEQLFADAGVMAIEHADFEGIERLGLVTGGEIVSTF 579
K+KV I+ H N FINRQLIYNYPEQLFADAGVMAIEHADFEG+ERL LVTGGEIVSTF
Sbjct: 273 KEKVEMIIKHDINCFINRQLIYNYPEQLFADAGVMAIEHADFEGVERLALVTGGEIVSTF 332
Query: 580 DSPDKVKLGHCKLIEEVLIGDESLIRFSGVALGSACTIVIRGATQQVIDEAERSLHDALC 759
PD VKLG CK IEEV+IG++ LI FSG AL ACT+VIRGATQQ++DEAERSLHDALC
Sbjct: 333 GRPDLVKLGTCKKIEEVMIGEDKLIHFSGCALNEACTVVIRGATQQILDEAERSLHDALC 392
Query: 760 VLAATVKEPKS 792
VL T KE K+
Sbjct: 393 VLNQTGKENKT 403
>SB_54147| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 74
Score = 113 bits (272), Expect = 2e-25
Identities = 51/73 (69%), Positives = 62/73 (84%)
Frame = +1
Query: 232 LNKKVGVHQPKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAEKEKMKDKV 411
++KK+GV+QPKK+ENA ILIANTPMD DK+KVFGS ++VDS AKIAELE AEK+KMKDKV
Sbjct: 1 MDKKIGVNQPKKIENAKILIANTPMDADKVKVFGSRVRVDSTAKIAELEKAEKQKMKDKV 60
Query: 412 NKILAHKCNVFIN 450
I+ H N F+N
Sbjct: 61 EMIIKHGINCFVN 73
>SB_52637| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0)
Length = 505
Score = 97.5 bits (232), Expect = 1e-20
Identities = 71/250 (28%), Positives = 121/250 (48%), Gaps = 7/250 (2%)
Frame = +1
Query: 61 ARTTLSSKILSNHKEHFTKLAVDAVLRLKGSGNLKA-IQIIKISG---GLLEESFLDEGF 228
A TTL SKI+S ++AVDAVL + ++IK+ G G L+++ L +G
Sbjct: 167 AMTTLGSKIVSRCHRPLAEIAVDAVLSVADLERKDVDFELIKVEGKEGGKLDDTVLVKGV 226
Query: 229 LLNKKVGVHQ-PKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAEKEKMKD 405
+++K + Q PK V++A I I P + K K + V ++ +L+ E+EK +
Sbjct: 227 VVDKDMSHPQMPKVVKDAKIAILTCPFEPPKPKT-KHKLDVATVEDYKKLQEYEREKFTE 285
Query: 406 KVNKILAHKCNVFINRQLIYNYPEQLFADAGVMAIEHADFEGIERLGLVTGGEIVSTFDS 585
+ ++ N+ I + + L + A+ IE + + TGG IV F
Sbjct: 286 MIKQVKDTGANLAICQWGFDDEANHLLLQNHLPAVRWVGGPEIELIAIATGGRIVPRFSE 345
Query: 586 PDKVKLGHCKLIEEVLIGD--ESLIRFSGVALGSACTIVIRGATQQVIDEAERSLHDALC 759
KLG ++ E+ G + ++ A TI IRG + ++ EA+RS+HDALC
Sbjct: 346 LTSEKLGKAGIVRELSFGTTKDKMLVIEECHNSRAVTIFIRGGNKMIVGEAKRSIHDALC 405
Query: 760 VLAATVKEPK 789
V+ V++ +
Sbjct: 406 VVRNLVRDSR 415
>SB_57454| Best HMM Match : DUF924 (HMM E-Value=1)
Length = 144
Score = 92.7 bits (220), Expect = 3e-19
Identities = 47/62 (75%), Positives = 52/62 (83%)
Frame = +1
Query: 40 RVDLENIARTTLSSKILSNHKEHFTKLAVDAVLRLKGSGNLKAIQIIKISGGLLEESFLD 219
R DL NIARTTLSSKIL H++HF KLAVDAVLRLKGSG+L AIQIIK GG + +SFLD
Sbjct: 71 RDDLMNIARTTLSSKILVQHRDHFAKLAVDAVLRLKGSGDLNAIQIIKKLGGGMVDSFLD 130
Query: 220 EG 225
EG
Sbjct: 131 EG 132
>SB_3351| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 77.8 bits (183), Expect = 1e-14
Identities = 51/165 (30%), Positives = 83/165 (50%), Gaps = 4/165 (2%)
Frame = +1
Query: 10 HQKNLNEASLRVDLENIARTTLSSKILSNHKEHFTKLAVDAVLRLKGSGNLKAIQIIKIS 189
H K + +R LE A T LSSK+++ KE F K+ VDAV+ L L I + K+S
Sbjct: 11 HVKKNDAGEMRQLLERCAATALSSKLIATQKEFFAKMVVDAVMMLDELLPLDMIGMKKVS 70
Query: 190 GGLLEESFLDEGFLLNKKVGV----HQPKKVENANILIANTPMDTDKIKVFGSTIKVDSM 357
GG LE+S L EG K QPK + I + N ++ K + + +++D++
Sbjct: 71 GGALEDSMLIEGVAFKKTFSYAGFEMQPKTYNHCKIALLNVELEL-KAEKENAEVRLDNV 129
Query: 358 AKIAELEVAEKEKMKDKVNKILAHKCNVFINRQLIYNYPEQLFAD 492
+ AE + + DK++K++ V +++ I + Q FAD
Sbjct: 130 KDYQSIVDAEWDILYDKLDKVVKSGAKVVLSKLPIGDVATQYFAD 174
>SB_56828| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 525
Score = 64.5 bits (150), Expect = 9e-11
Identities = 50/244 (20%), Positives = 111/244 (45%), Gaps = 2/244 (0%)
Frame = +1
Query: 64 RTTLSSK-ILSNHKEHFTKLAVDAVLRLKGSGNLKAIQIIKISGGLLEESFLDEGFLLNK 240
+T +SSK I S ++ + + ++L K + N+ +++ KI G + S + +G + K
Sbjct: 20 KTAVSSKQIRSIKNDNNMRFSSVSILPEKATFNVDNVRVAKILGSGIHNSEVVQGMVFKK 79
Query: 241 KVGVHQPKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAEKEKMKDKVNKI 420
V K ++ I + + P+D + + G T+ + + ++ E++ ++ ++ I
Sbjct: 80 GVEGDITSK-KDCKIAVFSCPLDLMQTETKG-TVLIKNAEELKSFSKGEEDLLEMQIKSI 137
Query: 421 LAHKCNVFINRQLIYNYPEQLFADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVK 600
+V ++ + + +M + + RL + +P
Sbjct: 138 KEKGADVIVSGGKVADMALHFCNKYQIMVVRLTSKWDLRRLCRAISATALPKVTTPTTED 197
Query: 601 LGHCKLIEEVLIGDESLIRFSGVALGSA-CTIVIRGATQQVIDEAERSLHDALCVLAATV 777
LGHC L+ IG+ + F +A T+VIRG+T+ ++D+ ER++ D + A
Sbjct: 198 LGHCDLVYLSEIGETPVTIFKQEREETAVATVVIRGSTENIMDDIERAIDDGVNSFKALT 257
Query: 778 KEPK 789
++P+
Sbjct: 258 RDPR 261
>SB_53295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 272
Score = 62.5 bits (145), Expect = 4e-10
Identities = 29/96 (30%), Positives = 60/96 (62%), Gaps = 1/96 (1%)
Frame = +1
Query: 499 VMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGHCKLIEEVLIGDESLIRFSGVAL- 675
++ + + + IE + G + +++ D + L +L+EEV +G +++ +GV+
Sbjct: 3 ILVVRDIERDEIEFICKSIGCKPIASLDHFNPDMLASAELVEEVSVGTSKVVKITGVSNP 62
Query: 676 GSACTIVIRGATQQVIDEAERSLHDALCVLAATVKE 783
G+ ++++RG+ + V++EA+RSLHDALCV+ VK+
Sbjct: 63 GNTVSVLVRGSNKLVLEEADRSLHDALCVIRCLVKK 98
>SB_30876| Best HMM Match : Ribosomal_S16 (HMM E-Value=7.1)
Length = 131
Score = 59.3 bits (137), Expect = 4e-09
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 8/110 (7%)
Frame = +1
Query: 61 ARTTLSSKILSNHKEHFTKLAVDAVLRLKGSGN-------LKAIQIIKISGGLLEESFLD 219
A T LSSK++ + F + VDAV+ +K +GN +KAI ++K GG +ES L
Sbjct: 17 ANTALSSKLIGQQGDFFANMIVDAVMAVKRTGNKGEAKYPIKAINVLKAHGGSAKESILV 76
Query: 220 EGFLLNKKVGVH-QPKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKI 366
+G+ LN + PK+V NA I + + K+ + G ++ VD K+
Sbjct: 77 DGYALNCTIASQAMPKQVTNAKIACLDFTLQKAKMHL-GVSVVVDDPEKL 125
>SB_49103| Best HMM Match : Cpn60_TCP1 (HMM E-Value=2.5e-05)
Length = 206
Score = 58.4 bits (135), Expect = 6e-09
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Frame = +1
Query: 532 IERLGLVTGGEIVSTFDSPDKVKLGHCKLIEEVLIGD--ESLIRFSGVALGSACTIVIRG 705
IE + + TGG IV F KLG ++ E+ G + ++ A TI IRG
Sbjct: 43 IELIAIATGGRIVPRFSELTSEKLGKAGIVRELSFGTTKDKMLVIEECHNSRAVTIFIRG 102
Query: 706 ATQQVIDEAERSLHDALCVLAATVKEPK 789
+ ++ EA+RS+HDALCV+ V++ +
Sbjct: 103 GNKMIVGEAKRSIHDALCVVRNLVRDSR 130
>SB_5310| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 219
Score = 46.4 bits (105), Expect = 3e-05
Identities = 18/41 (43%), Positives = 28/41 (68%)
Frame = +1
Query: 658 FSGVALGSACTIVIRGATQQVIDEAERSLHDALCVLAATVK 780
FSG + CTI++RG +Q ++E ERSLHDA+ ++ +K
Sbjct: 5 FSGCKQSTTCTIIMRGGAEQFMEETERSLHDAIMIVRRAMK 45
>SB_37504| Best HMM Match : PIP5K (HMM E-Value=0)
Length = 2119
Score = 45.2 bits (102), Expect = 6e-05
Identities = 40/196 (20%), Positives = 87/196 (44%), Gaps = 6/196 (3%)
Frame = +1
Query: 169 IQIIKISGGLLEESFLDEGFLLNKKVGVHQPKKV-ENANILIANTPMDTDKIKVFGSTIK 345
++ KI GG +E L G + K V + V N IL+ +D + +
Sbjct: 570 VKFKKIPGGSRDECKLISGVVFTKNVSHKKMSCVFNNPQILVLCCAIDYQRNE------- 622
Query: 346 VDSMAKIAELEVAEKEKMKDKVNKILAHKCNVFINRQLIYNYPEQLFADAGVMAIEHADF 525
+ +A + L + E+ +K+ V+++ A + NV + + + +++ G+ +
Sbjct: 623 -NRLASLDPLVLQERNFLKNFVSRVAALRPNVLLVEKTVSRLAQEMLLQHGISLALNVKP 681
Query: 526 EGIERLGLVTGGEIVSTFDSPDKVKLGHCKLIE----EVLIGD-ESLIRFSGVALGSACT 690
IER+ T E + + + + +LG C+L ++ G+ ++L+ G CT
Sbjct: 682 AVIERVSRCTKAETLRSMEQLSRPRLGSCQLFRVQNFKLKNGETKTLMYLEGCPTELGCT 741
Query: 691 IVIRGATQQVIDEAER 738
+ +RG V+ + ++
Sbjct: 742 VTLRGGNSFVLTKIKK 757
>SB_37965| Best HMM Match : TIR (HMM E-Value=3.3)
Length = 189
Score = 41.5 bits (93), Expect = 8e-04
Identities = 19/40 (47%), Positives = 29/40 (72%)
Frame = +1
Query: 679 SACTIVIRGATQQVIDEAERSLHDALCVLAATVKEPKSYV 798
S+ +I++RGA ++DE ERS+HDA+CV+ V E K+ V
Sbjct: 6 SSSSIILRGANDYMLDEMERSMHDAICVV-KRVLESKTLV 44
>SB_25100| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 546
Score = 40.3 bits (90), Expect = 0.002
Identities = 16/36 (44%), Positives = 27/36 (75%)
Frame = +1
Query: 682 ACTIVIRGATQQVIDEAERSLHDALCVLAATVKEPK 789
ACTI++RGA++ V++E ER+L DA+ V + +P+
Sbjct: 160 ACTILLRGASKDVLNEVERNLQDAMNVARNVIVDPR 195
>SB_17755| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 317
Score = 40.3 bits (90), Expect = 0.002
Identities = 16/36 (44%), Positives = 27/36 (75%)
Frame = +1
Query: 682 ACTIVIRGATQQVIDEAERSLHDALCVLAATVKEPK 789
ACTI++RGA++ V++E ER+L DA+ V + +P+
Sbjct: 217 ACTILLRGASKDVLNEVERNLQDAMNVARNVIVDPR 252
>SB_30391| Best HMM Match : SpoVG (HMM E-Value=6.4)
Length = 101
Score = 33.5 bits (73), Expect = 0.20
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
Frame = +1
Query: 385 EKEKMKDKVNKILAHKCNVFINRQLIYNYPEQLFADAGVMAIEHADFEGIERLGLVTGGE 564
E + K+++ KILA NV ++ I + + F + G MA+ ++R+ TG
Sbjct: 2 ESDITKERIQKILASGANVVLSTGGIDDLCLKYFVECGAMAVRRVKKGDLKRIARSTGAT 61
Query: 565 IVSTF------DSPDKVKLGHCKLIEEVLIGDESLI 654
+V + +S D LG + + + I D+ LI
Sbjct: 62 MVLSLANLEGEESFDASMLGQAEEVCQQRICDDELI 97
>SB_30399| Best HMM Match : ERM (HMM E-Value=0.37)
Length = 562
Score = 32.7 bits (71), Expect = 0.35
Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 1/97 (1%)
Frame = +1
Query: 316 KIKVFGSTIKVDSMAKIAELEVAEKEKMKDKVNKILAHKCNVFINRQ-LIYNYPEQLFAD 492
KI+ F + +VD + + + + E E +VNK++ I R+ L ++P+ + A
Sbjct: 254 KIETFYTQTRVDQLERKIKAKRQENESSAAEVNKLVDQLQRAVIARKPLKADFPKGILAS 313
Query: 493 AGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKL 603
+EH G T G++ + DSP + L
Sbjct: 314 HVKQVLEHHLVNEASGKGGFTTGKVSISVDSPTDLYL 350
>SB_26565| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 418
Score = 32.3 bits (70), Expect = 0.47
Identities = 25/107 (23%), Positives = 46/107 (42%), Gaps = 3/107 (2%)
Frame = +1
Query: 475 EQLFADAGVMAIEHADFEGIERLGLVTGGEIVSTF--DSPDKVKLGHCKLIEEVLIGDES 648
++ D V + I + +TG ++STF D P+ G IE +I ++S
Sbjct: 22 KRFLKDRKVYVFDRLSVMHINAVQRLTGATLLSTFTTDIPEHW-YGQLDSIEYTVIANKS 80
Query: 649 LIRFSGVA-LGSACTIVIRGATQQVIDEAERSLHDALCVLAATVKEP 786
+ + S CT+++ + ++E + A+ VLA V P
Sbjct: 81 YLHLIPTQPMTSVCTVILCSPDESSLEELLSTCQSAMSVLAQVVAYP 127
>SB_59319| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 28
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +1
Query: 325 VFGSTIKVDSMAKIAELEVAEKEKMKDK 408
VFGS ++VDS AKIA +E +K K K
Sbjct: 1 VFGSRVRVDSTAKIAGVESRKKWKRTPK 28
>SB_49341| Best HMM Match : Rad21_Rec8_N (HMM E-Value=2.3)
Length = 549
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = -3
Query: 695 TIVQAEPNATPEKRIKLSSPIRTSSINLQ*PSFTLSGESNVDTISPPVTKPSLSIPS 525
T++Q P +TP +S+P T ++ + +S S+ +S P P +S PS
Sbjct: 368 TLIQYNPVSTPSNTPPVSTPSHTPPVSTPSHTPPVSTPSHTPPVSTPSHTPPVSTPS 424
>SB_43283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 278
Score = 30.3 bits (65), Expect = 1.9
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Frame = -3
Query: 722 ITCCVAPRITIVQAEPNATPEKRIKLSSPIRTSSINLQ*PSFTLSGESNVDTI----SPP 555
+T +A + + +A E S+P+ T+S+ TL+ S VDT SP
Sbjct: 157 VTTSLASAPVVTTSLASAPVETTSLASTPVETTSLASTPVDTTLTASSPVDTTLTASSPV 216
Query: 554 VTKPSLSIPSKSACSIAITPASA 486
T P+ S P K+ +A TP A
Sbjct: 217 ETTPTASPPVKTT-PLAATPVYA 238
>SB_50789| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 777
Score = 29.5 bits (63), Expect = 3.3
Identities = 20/63 (31%), Positives = 34/63 (53%)
Frame = +1
Query: 4 FDHQKNLNEASLRVDLENIARTTLSSKILSNHKEHFTKLAVDAVLRLKGSGNLKAIQIIK 183
F Q LN A L V L+NIAR + +I + +E F + D +L ++ S + + ++ +
Sbjct: 68 FFMQAQLNIACLVVMLDNIARN--NRRIRKSGREEFLRKEEDNLLGIRSSESSRIKRVTR 125
Query: 184 ISG 192
SG
Sbjct: 126 NSG 128
>SB_57181| Best HMM Match : bZIP_1 (HMM E-Value=0.19)
Length = 104
Score = 29.1 bits (62), Expect = 4.4
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Frame = +1
Query: 307 DTDKIKVFGSTIKVDSMAKIAELEVAEKEKMKDKVNKILAHKCNVFINRQLIYNYPEQLF 486
+T+KI+ +V +IAEL+V EK++ + N+ L + V Y ++
Sbjct: 26 ETEKIRREYEVFRVSKQTEIAELQVL-NEKLQSE-NRRLRGESKVLQATCQKLRYEREMA 83
Query: 487 ADAGVMAIEH-ADFE-GIERL 543
DAG A++ A FE G+ R+
Sbjct: 84 LDAGDQALQRAATFEKGLNRI 104
>SB_27444| Best HMM Match : Phage_integrase (HMM E-Value=0.0013)
Length = 940
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 702 WCHATSYRRS*AFTP*CALRACCYCKR 782
+C RS +P CA+ ACC+C R
Sbjct: 300 FCFQKESCRSKEVSPPCAVMACCFCNR 326
>SB_3960| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 762
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/36 (36%), Positives = 24/36 (66%)
Frame = +1
Query: 40 RVDLENIARTTLSSKILSNHKEHFTKLAVDAVLRLK 147
R L N+A+T+L +K+ + + T++ VDAVL ++
Sbjct: 247 RDTLINVAKTSLRTKVRTELADLLTEVVVDAVLTIR 282
>SB_43495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1994
Score = 28.7 bits (61), Expect = 5.8
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Frame = -3
Query: 680 EPNATPE--KRIKLSS-PIRTSSINLQ*-PSFTLSGESNVDTISPPVTKP--SLSIPSKS 519
+P+ TP K + L++ P T+S L+ PS TLS + PP + P S + +
Sbjct: 1054 QPSVTPASTKSVSLTATPATTTSEVLEPSPSLTLSSSEAASSTLPPTSLPVAQSSTSTST 1113
Query: 518 ACSIAITPASA 486
+ A+TP+S+
Sbjct: 1114 VKTAAVTPSSS 1124
>SB_13397| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 513
Score = 28.3 bits (60), Expect = 7.6
Identities = 21/85 (24%), Positives = 34/85 (40%)
Frame = +1
Query: 301 PMDTDKIKVFGSTIKVDSMAKIAELEVAEKEKMKDKVNKILAHKCNVFINRQLIYNYPEQ 480
P+ T I+VF I D + KIA+ E+ E K + + H F + + + E
Sbjct: 399 PILTKLIRVFRRQILEDDLDKIAKTEIHEDSKFMEAIELFTHHARAQFQSLVELRHQAEL 458
Query: 481 LFADAGVMAIEHADFEGIERLGLVT 555
FA E + GL++
Sbjct: 459 SFATTLEYFGEETSISSAQFFGLIS 483
>SB_11721| Best HMM Match : Peptidase_C12 (HMM E-Value=0)
Length = 537
Score = 28.3 bits (60), Expect = 7.6
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = -3
Query: 671 ATPEKRIKLSSPIRTSSINLQ*PSFTLSGESNVDTISPPVTKPSLSIPSKSACSIAITPA 492
A+P + +S SS ++Q S ++ + PP P + P S ++AIT A
Sbjct: 229 ASPSPATQTTSSPTNSSTSVQVQPLETSKDNAKQLMPPPPPPPRATPPPVSIATVAITTA 288
Query: 491 SA 486
+A
Sbjct: 289 AA 290
>SB_8887| Best HMM Match : G-patch (HMM E-Value=1.2e-08)
Length = 739
Score = 28.3 bits (60), Expect = 7.6
Identities = 30/124 (24%), Positives = 59/124 (47%), Gaps = 6/124 (4%)
Frame = +1
Query: 73 LSSKILSNHKEHFTKLAVDAVLRLKGSGNLKAIQIIKISGGLLEESFL-DE--GFLLNKK 243
L SKI+S+ + HF + + +G+ +LK+ S + + F+ DE G +
Sbjct: 190 LQSKIVSSKELHFFEPTQISTSHEQGNQDLKSALAEAASAAMTKSGFVFDERTGLYYDWN 249
Query: 244 VGV-HQPKK--VENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAEKEKMKDKVN 414
G+ + P+ N N T ++ + F S + + ++A A+ V ++++ K+K
Sbjct: 250 SGLYYNPRTCLYYNNNTGTYYTYNESSRSYDFHSQVDIQAIANTAQESVEKQKRRKEKKI 309
Query: 415 KILA 426
K LA
Sbjct: 310 KGLA 313
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.317 0.135 0.368
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,815,236
Number of Sequences: 59808
Number of extensions: 484407
Number of successful extensions: 1250
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1063
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1241
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2203769656
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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