Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0390
(767 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 380 e-106
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 380 e-106
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 380 e-106
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 380 e-106
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 169 1e-42
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 157 8e-39
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 121 5e-28
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 113 9e-26
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 36 5e-06
At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 42 6e-04
At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 42 6e-04
At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 40 0.001
At1g04170.1 68414.m00407 eukaryotic translation initiation facto... 40 0.002
At2g31060.1 68415.m03790 elongation factor family protein contai... 38 0.006
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 36 0.039
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 33 0.16
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 33 0.16
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 33 0.28
At3g01360.1 68416.m00057 expressed protein contains Pfam profile... 33 0.28
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 32 0.48
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 31 0.64
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 31 0.64
At5g46180.1 68418.m05680 ornithine aminotransferase, putative / ... 31 1.1
At2g46830.1 68415.m05843 myb-related transcription factor (CCA1)... 31 1.1
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 30 1.5
At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 30 1.5
At1g76825.1 68414.m08940 eukaryotic translation initiation facto... 30 2.0
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 30 2.0
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 29 2.6
At4g29900.1 68417.m04254 calcium-transporting ATPase, plasma mem... 29 4.5
At2g39560.1 68415.m04853 expressed protein 29 4.5
At1g47840.1 68414.m05325 hexokinase, putative similar to hexokin... 29 4.5
At1g27900.1 68414.m03419 RNA helicase, putative similar to SP|Q1... 29 4.5
At3g43240.1 68416.m04564 ARID/BRIGHT DNA-binding domain-containi... 28 6.0
At3g20440.1 68416.m02588 glycoside hydrolase family 13 protein s... 28 6.0
At3g18370.1 68416.m02336 C2 domain-containing protein contains P... 28 6.0
At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 28 6.0
At5g51710.1 68418.m06413 K+ efflux antiporter, putative (KEA5) M... 28 7.9
At5g19490.1 68418.m02322 repressor protein-related similar to re... 28 7.9
At5g13650.2 68418.m01585 elongation factor family protein contai... 28 7.9
At5g13650.1 68418.m01584 elongation factor family protein contai... 28 7.9
At1g26130.1 68414.m03190 haloacid dehalogenase-like hydrolase fa... 28 7.9
At1g18900.2 68414.m02353 pentatricopeptide (PPR) repeat-containi... 28 7.9
At1g18900.1 68414.m02352 pentatricopeptide (PPR) repeat-containi... 28 7.9
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 380 bits (936), Expect = e-106
Identities = 181/255 (70%), Positives = 212/255 (83%)
Frame = +2
Query: 2 ETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLA 181
ET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLA
Sbjct: 81 ETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLA 140
Query: 182 FTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDN 361
FTLGVKQ+I NKMD+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ GDN
Sbjct: 141 FTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDN 200
Query: 362 MLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIG 541
M+E ST + W+K G L+EALD I P RP+DKPLRLPLQDVYKIGGIG
Sbjct: 201 MIERSTNLDWYK------------GPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIG 248
Query: 542 TVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKEL 721
TVPVGRVETG++KPG +V FAP +TTEVKSVEMHHE+L EA+PGDNVGFNVKNV+VK+L
Sbjct: 249 TVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDL 308
Query: 722 RRGYVAGDSKNNPPK 766
+RGYVA +SK++P K
Sbjct: 309 KRGYVASNSKDDPAK 323
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 380 bits (936), Expect = e-106
Identities = 181/255 (70%), Positives = 212/255 (83%)
Frame = +2
Query: 2 ETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLA 181
ET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLA
Sbjct: 81 ETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLA 140
Query: 182 FTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDN 361
FTLGVKQ+I NKMD+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ GDN
Sbjct: 141 FTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDN 200
Query: 362 MLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIG 541
M+E ST + W+K G L+EALD I P RP+DKPLRLPLQDVYKIGGIG
Sbjct: 201 MIERSTNLDWYK------------GPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIG 248
Query: 542 TVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKEL 721
TVPVGRVETG++KPG +V FAP +TTEVKSVEMHHE+L EA+PGDNVGFNVKNV+VK+L
Sbjct: 249 TVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDL 308
Query: 722 RRGYVAGDSKNNPPK 766
+RGYVA +SK++P K
Sbjct: 309 KRGYVASNSKDDPAK 323
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 380 bits (936), Expect = e-106
Identities = 181/255 (70%), Positives = 212/255 (83%)
Frame = +2
Query: 2 ETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLA 181
ET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLA
Sbjct: 81 ETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLA 140
Query: 182 FTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDN 361
FTLGVKQ+I NKMD+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ GDN
Sbjct: 141 FTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDN 200
Query: 362 MLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIG 541
M+E ST + W+K G L+EALD I P RP+DKPLRLPLQDVYKIGGIG
Sbjct: 201 MIERSTNLDWYK------------GPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIG 248
Query: 542 TVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKEL 721
TVPVGRVETG++KPG +V FAP +TTEVKSVEMHHE+L EA+PGDNVGFNVKNV+VK+L
Sbjct: 249 TVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDL 308
Query: 722 RRGYVAGDSKNNPPK 766
+RGYVA +SK++P K
Sbjct: 309 KRGYVASNSKDDPAK 323
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 380 bits (936), Expect = e-106
Identities = 181/255 (70%), Positives = 212/255 (83%)
Frame = +2
Query: 2 ETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLA 181
ET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLA
Sbjct: 81 ETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLA 140
Query: 182 FTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDN 361
FTLGVKQ+I NKMD+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ GDN
Sbjct: 141 FTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDN 200
Query: 362 MLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIG 541
M+E ST + W+K G L+EALD I P RP+DKPLRLPLQDVYKIGGIG
Sbjct: 201 MIERSTNLDWYK------------GPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIG 248
Query: 542 TVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKEL 721
TVPVGRVETG++KPG +V FAP +TTEVKSVEMHHE+L EA+PGDNVGFNVKNV+VK+L
Sbjct: 249 TVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDL 308
Query: 722 RRGYVAGDSKNNPPK 766
+RGYVA +SK++P K
Sbjct: 309 KRGYVASNSKDDPAK 323
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 169 bits (412), Expect = 1e-42
Identities = 96/257 (37%), Positives = 145/257 (56%), Gaps = 3/257 (1%)
Frame = +2
Query: 2 ETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLA 181
ET TI+DAPGH+ ++ NMI+G SQAD VL+++A GEFE G + GQTREH LA
Sbjct: 175 ETESTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQTREHVQLA 234
Query: 182 FTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAA-VAFVPISGWHGD 358
TLGV +LIV VNKMD +S+ R++EI++++ ++K GYN V F+PISG G
Sbjct: 235 KTLGVSKLIVVVNKMDDPTVNWSKERYDEIEQKMVPFLKASGYNTKKDVVFLPISGLMGK 294
Query: 359 NMLEPSTK--MPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDKPLRLPLQDVYKIG 532
NM + + PW W G E LD+I P R + P R+P+ D +K
Sbjct: 295 NMDQRMGQEICPW---W---------SGPSFFEVLDSIEIPPRDPNGPFRMPIIDKFK-- 340
Query: 533 GIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSV 712
+GTV +G+VE+G ++ G +V P +V ++ + ++ A PG+N+ + +
Sbjct: 341 DMGTVVMGKVESGSIREGDSLVVMPNKEQVKVVAIYCDEDKVKRAGPGENLRVRITGIED 400
Query: 713 KELRRGYVAGDSKNNPP 763
+++ G+V N P
Sbjct: 401 EDILSGFVLSSIVNPVP 417
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 157 bits (381), Expect = 8e-39
Identities = 83/247 (33%), Positives = 139/247 (56%), Gaps = 3/247 (1%)
Frame = +2
Query: 5 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK-NGQTREHALLA 181
+ +++V ++D+PGH+DF+ NMI G +QAD A+L++ A G FEAG GQTREHA +
Sbjct: 314 SKRHHVVLLDSPGHKDFVPNMIAGATQADAAILVIDASVGAFEAGFDNLKGQTREHARVL 373
Query: 182 FTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDN 361
GV+Q+IV +NKMD YS+ RF+ IK+ V S+++ + +++ ++P+S N
Sbjct: 374 RGFGVEQVIVAINKMDIV--GYSKERFDLIKQHVGSFLQSCRFKDSSLTWIPLSAMENQN 431
Query: 362 ML-EPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGI 538
++ PS W G CL++A+D++ P R KPL +P+ D +
Sbjct: 432 LVAAPSDNR--LSSWY--------QGPCLLDAVDSVKSPDRDVSKPLLMPICDAVRSTSQ 481
Query: 539 GTVPV-GRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVK 715
G V G++E G ++PG+ V+ P+ ++S+E +A A GDNV ++ +
Sbjct: 482 GQVSACGKLEAGAVRPGSKVMVMPSGDQGTIRSLERDSQACTIARAGDNVALALQGIDAN 541
Query: 716 ELRRGYV 736
++ G V
Sbjct: 542 QVMAGDV 548
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 121 bits (292), Expect = 5e-28
Identities = 85/250 (34%), Positives = 126/250 (50%), Gaps = 5/250 (2%)
Frame = +2
Query: 2 ETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLA 181
ET + +D PGH D++KNMITG +Q D A+L+V+ G QT+EH LLA
Sbjct: 138 ETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP-------QTKEHILLA 190
Query: 182 FTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDN 361
+GV ++V +NK D + E ++ EV + +N +PI
Sbjct: 191 KQVGVPDMVVFLNKEDQVD---DAELLELVELEVRELLSSYEFNGDD---IPIISGSALL 244
Query: 362 MLEPSTKMPWFKGWQVERKEGKADGKC--LIEALDAILP-PARPTDKPLRLPLQDVYKIG 532
+E T+ P +V+R + K K L++A+D +P P R T+ P L ++DV+ I
Sbjct: 245 AVETLTENP-----KVKRGDNKWVDKIYELMDAVDDYIPIPQRQTELPFLLAVEDVFSIT 299
Query: 533 GIGTVPVGRVETGVLKPGTIVVFAPANITTE--VKSVEMHHEALQEAVPGDNVGFNVKNV 706
G GTV GRVE G +K G V T V VEM + L EA+ GDNVG ++ +
Sbjct: 300 GRGTVATGRVERGTVKVGETVDLVGLRETRSYTVTGVEMFQKILDEALAGDNVGLLLRGI 359
Query: 707 SVKELRRGYV 736
+++RG V
Sbjct: 360 QKADIQRGMV 369
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 113 bits (273), Expect = 9e-26
Identities = 80/251 (31%), Positives = 123/251 (49%), Gaps = 6/251 (2%)
Frame = +2
Query: 2 ETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLA 181
ET+K + +D PGH D++KNMITG +Q D +L+V+ G QT+EH LLA
Sbjct: 126 ETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGPMP-------QTKEHILLA 178
Query: 182 FTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDN 361
+GV L+ +NK+D + P E +E+ S+ K G + + +S G N
Sbjct: 179 RQVGVPSLVCFLNKVDVVDDPELLELVEMELRELLSFYKFPGDDIPIIRGSALSALQGTN 238
Query: 362 MLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILP-PARPTDKPLRLPLQDVYKIGGI 538
+ G+ L++A+D +P P R DKP +P++DV+ I G
Sbjct: 239 -----------------DEIGRQAILKLMDAVDEYIPDPVRVLDKPFLMPIEDVFSIQGR 281
Query: 539 GTVPVGRVETGVLKPGTIVVF-----APANITTEVKSVEMHHEALQEAVPGDNVGFNVKN 703
GTV GR+E GV+K G V + + V VEM + L GDNVG ++
Sbjct: 282 GTVATGRIEQGVIKVGEEVEILGLREGGVPLKSTVTGVEMFKKILDNGQAGDNVGLLLRG 341
Query: 704 VSVKELRRGYV 736
+ ++++RG V
Sbjct: 342 LKREDIQRGMV 352
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 35.9 bits (79), Expect(2) = 5e-06
Identities = 29/96 (30%), Positives = 45/96 (46%)
Frame = +2
Query: 2 ETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLA 181
E S Y + +ID PGH DF + S A+L+V A G QT + LA
Sbjct: 131 EASGYLLNLIDTPGHVDFSYEVSRSLSACQGALLVVDAAQG-------VQAQTVANFYLA 183
Query: 182 FTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSS 289
F + ++ +NK+D P ++P E +K ++ S
Sbjct: 184 FEANL-TIVPVINKIDQ---PTADP--ERVKAQLKS 213
Score = 31.9 bits (69), Expect(2) = 5e-06
Identities = 32/111 (28%), Positives = 47/111 (42%), Gaps = 3/111 (2%)
Frame = +2
Query: 407 VERKEGKADGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 586
V K G L ++ I PP ++ PLR+ L D + G + V G+L G
Sbjct: 225 VSAKTGLGLEHVLPAVIERIPPPPGISESPLRMLLFDSFFNEYKGVICYVSVVDGMLSKG 284
Query: 587 TIVVFAPANITTEVKSVEMHHEALQEA--VPGDNVGFNVKNV-SVKELRRG 730
V FA + + EV V + H L + VG+ V + + KE R G
Sbjct: 285 DKVSFAASGQSYEVLDVGIMHPELTSTGMLLTGQVGYIVTGMRTTKEARIG 335
>At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 471
Score = 41.5 bits (93), Expect = 6e-04
Identities = 25/95 (26%), Positives = 46/95 (48%)
Frame = +2
Query: 5 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAF 184
T + +V+ +D PGH + M+ G + D A+L++AA QT EH
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAEHLASVD 177
Query: 185 TLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSS 289
+ +K +I+ NK+D + + E I+K +++
Sbjct: 178 MMRLKHIIILQNKIDLINEKAATEQHEAIQKFITN 212
>At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 284
Score = 41.5 bits (93), Expect = 6e-04
Identities = 25/95 (26%), Positives = 46/95 (48%)
Frame = +2
Query: 5 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAF 184
T + +V+ +D PGH + M+ G + D A+L++AA QT EH
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAEHLASVD 177
Query: 185 TLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSS 289
+ +K +I+ NK+D + + E I+K +++
Sbjct: 178 MMRLKHIIILQNKIDLINEKAATEQHEAIQKFITN 212
>At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative
Length = 465
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/91 (26%), Positives = 46/91 (50%)
Frame = +2
Query: 17 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 196
+V+ +D PGH + M+ G + D A+LI+AA QT EH + +
Sbjct: 120 HVSFVDCPGHDILMATMLNGAAIMDGALLIIAANE------TCPQPQTAEHLASVDMMHL 173
Query: 197 KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSS 289
K +I+ NK+D + + + E+I++ +++
Sbjct: 174 KDIIIIQNKIDLIQENEAIKQHEDIQRFITN 204
>At1g04170.1 68414.m00407 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to gb|U37354 from S. pombe. ESTs
gb|T41979, gb|N37284 and gb|N37529 come from this gene
Length = 465
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/93 (25%), Positives = 45/93 (48%)
Frame = +2
Query: 17 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 196
+V+ +D PGH + M+ G + D A+L++AA QT EH + +
Sbjct: 122 HVSFVDCPGHDILMATMLNGAAIMDGALLLIAANE------TCPQPQTSEHLAAVEIMQL 175
Query: 197 KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI 295
K +I+ NK+D + + + E I+K + + +
Sbjct: 176 KHIIILQNKIDLIQENVAINQHEAIQKFIMNTV 208
>At2g31060.1 68415.m03790 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain, PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 527
Score = 38.3 bits (85), Expect = 0.006
Identities = 43/168 (25%), Positives = 73/168 (43%), Gaps = 4/168 (2%)
Frame = +2
Query: 95 AVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIK 274
A+L+V AG G QT+ A G++ +++ +NK+D P +E R +E++
Sbjct: 5 AILVVDAGEGPL-------AQTKFVLAKALKYGLRPILL-LNKVD--RPSVTEERCDEVE 54
Query: 275 KEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEA 454
V G + F P+ L S K W K+ D K + +
Sbjct: 55 SLVFDLFANCGATEEQLDF-PV--------LYASAKEGWASSTYT--KDPPVDAKNMADL 103
Query: 455 LDAIL----PPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 586
LDA++ PP D+P + + + K +G + GRV +GV++ G
Sbjct: 104 LDAVVRHVQPPKANLDEPFLMLVSMMEKDFYLGRILTGRVTSGVVRVG 151
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 35.5 bits (78), Expect = 0.039
Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 3/105 (2%)
Frame = +2
Query: 20 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 199
+T +D PGH F + G + D VL+VAA G QT E A + V
Sbjct: 270 ITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDGVMP-------QTLEAIAHARSANV- 321
Query: 200 QLIVGVNKMDSTEPPYSEPRFEEIKKEVSS---YIKKIGYNPAAV 325
++V +NK D P + P E++K +++S ++ IG N AV
Sbjct: 322 PVVVAINKCDK---PGANP--EKVKYQLTSEGIELEDIGGNVQAV 361
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 33.5 bits (73), Expect = 0.16
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +2
Query: 5 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 124
+ Y I+D PGH +F M AD AVLIV A G
Sbjct: 206 SKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 33.5 bits (73), Expect = 0.16
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +2
Query: 5 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 124
+ Y I+D PGH +F M AD AVLIV A G
Sbjct: 206 SKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 32.7 bits (71), Expect = 0.28
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +2
Query: 14 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 124
Y + +ID+PGH DF + T +D A+++V A G
Sbjct: 74 YSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEG 110
>At3g01360.1 68416.m00057 expressed protein contains Pfam profile
PF04819: Family of unknown function (DUF716) (Plant
viral-response family)
Length = 319
Score = 32.7 bits (71), Expect = 0.28
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
Frame = +2
Query: 29 IDAPGHRDFIKNMITGTSQADCAV-LIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 205
I GH D+ + T Q +C + L+V TG F +KNG R+ LG +
Sbjct: 226 IKCKGHGDYHRAKAIATLQFNCHLALMVVVATGLFSVIANKNGYLRQDHSKYRPLGAELE 285
Query: 206 IVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYN 313
+ +DS E +E+++E S+ K++G N
Sbjct: 286 NLSTFTLDSDEE-------DEVREE-SNVAKEVGLN 313
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 31.9 bits (69), Expect = 0.48
Identities = 29/98 (29%), Positives = 49/98 (50%)
Frame = +2
Query: 2 ETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLA 181
E + + + +ID PGH DF + + + A+L+V A G EA QT + LA
Sbjct: 148 EDTPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQG-VEA------QTLANVYLA 200
Query: 182 FTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI 295
+ ++I +NK+D P +EP E++ +E+ I
Sbjct: 201 LENNL-EIIPVLNKIDL---PGAEP--EKVLREIEEVI 232
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 31.5 bits (68), Expect = 0.64
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +2
Query: 14 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 169
Y V IID PGH DF + D A+L++ + G I+ + Q R +
Sbjct: 133 YKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRY 184
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 31.5 bits (68), Expect = 0.64
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +2
Query: 14 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 169
Y V IID PGH DF + D A+L++ + G I+ + Q R +
Sbjct: 133 YKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRY 184
>At5g46180.1 68418.m05680 ornithine aminotransferase, putative /
ornithine--oxo-acid aminotransferase, putative similar
to SP|Q92413 Ornithine aminotransferase (EC 2.6.1.13)
(Ornithine--oxo-acid aminotransferase) [Aspergillus
nidulans] {Emericella nidulans}; contains Pfam profile
PF00202: aminotransferase, class III
Length = 475
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +2
Query: 185 TLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISG 346
T GV++ G+ + +S PP S R E++ E S++ Y+P V F +G
Sbjct: 18 TAGVRRSYGGLPQSNSKSPPSSSQRLMELESEFSAH----NYHPVPVVFSRANG 67
>At2g46830.1 68415.m05843 myb-related transcription factor (CCA1)
identical to myb-related transcription factor (CCA1)
GI:4090569 from [Arabidopsis thaliana]
Length = 608
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 416 KEGKADGKCLIEALDAILPPARPTDKP 496
KE +A G + +ALD +PP RP KP
Sbjct: 74 KEAEAKGVAMGQALDIAIPPPRPKRKP 100
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/68 (30%), Positives = 34/68 (50%)
Frame = +2
Query: 26 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 205
+ID PGH F G+S D A+L+V + + G+ QT E +L + +
Sbjct: 705 VIDTPGHESFTNLRSRGSSLCDLAILVV-----DIKHGLEP--QTIE-SLNLLRMRNTEF 756
Query: 206 IVGVNKMD 229
I+ +NK+D
Sbjct: 757 IIALNKVD 764
>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1088
Score = 30.3 bits (65), Expect = 1.5
Identities = 22/70 (31%), Positives = 33/70 (47%)
Frame = +2
Query: 20 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 199
+ +ID PGH F G++ D A+L+V + G+ QT E L VK
Sbjct: 558 ILVIDTPGHESFTNLRSRGSNLCDLAILVV-----DIMRGLEP--QTIESLNLLRRRNVK 610
Query: 200 QLIVGVNKMD 229
I+ +NK+D
Sbjct: 611 -FIIALNKVD 619
>At1g76825.1 68414.m08940 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profile PF00009: Elongation
factor Tu GTP binding domain
Length = 630
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 26 IIDAPGHRDFIKNMITGTSQADCAVLIV 109
+ID PGH F G+S D A+L+V
Sbjct: 113 VIDTPGHESFTNLRSRGSSLCDLAILVV 140
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 26 IIDAPGHRDFIKNMITGTSQADCAVLIV 109
+ID PGH F G+S D A+L+V
Sbjct: 772 VIDTPGHESFTNLRSRGSSLCDLAILVV 799
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 8 SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 109
++Y + +ID+PGH DF + D A+++V
Sbjct: 96 NEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
>At4g29900.1 68417.m04254 calcium-transporting ATPase, plasma
membrane-type, putative / Ca2+-ATPase, putative (ACA10)
identical to SP|Q9SZR1 Potential calcium-transporting
ATPase 10, plasma membrane-type (EC 3.6.3.8)
(Ca(2+)-ATPase isoform 10) {Arabidopsis thaliana};
similar to SP|Q9LF79 Calcium-transporting ATPase 8,
plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform
8) {Arabidopsis thaliana}
Length = 1069
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -3
Query: 672 GTASWRASWCISTDLTSVVMLAGAKTTMVPGFNT 571
G + WR W S DLT ++++ A ++ G T
Sbjct: 178 GRSFWRFVWEASQDLTLIILIVAAVASLALGIKT 211
>At2g39560.1 68415.m04853 expressed protein
Length = 233
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -3
Query: 591 MVPGFNTPVSTLPTGTVPIPPILYTSCRGRRRGLS 487
+ P + TP ++ T P+ P+L SC GR+ +S
Sbjct: 144 ITPPYLTPRASPSLFTPPLTPLLMESCNGRKEEIS 178
>At1g47840.1 68414.m05325 hexokinase, putative similar to hexokinase
1 [Arabidopsis thaliana] Swiss-Prot:Q42525
Length = 493
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 365 LEPSTKMPWFKGWQVERKEGKADGKCLIEALDA 463
++ T W KG++V EGK CL EA++A
Sbjct: 189 IDSGTLSKWTKGFKVSGMEGKNVVACLNEAMEA 221
>At1g27900.1 68414.m03419 RNA helicase, putative similar to
SP|Q14562 ATP-dependent helicase DDX8 (RNA helicase
HRH1) (DEAH-box protein 8) {Homo sapiens}; contains Pfam
profiles PF04408: Helicase associated domain (HA2),
PF00271: Helicase conserved C-terminal domain
Length = 700
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = -3
Query: 693 LKPTLSPGTASWRASWCISTDLTSVVMLAGAKTTMVPGFNTP 568
L+P+LS + C+S LT V ML+ A+TT++P + P
Sbjct: 428 LEPSLSRTLIEANETGCLSQALTVVAMLS-AETTLLPARSKP 468
>At3g43240.1 68416.m04564 ARID/BRIGHT DNA-binding domain-containing
protein contains Pfam profile PF01388: ARID/BRIGHT DNA
binding domain
Length = 747
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +1
Query: 301 DWLQPSCCRFRAHFWMARRQHVGAFNQNALVQGM 402
DW+ C AHF RR +GAF A G+
Sbjct: 687 DWVNCGSCGEWAHFGCDRRPGLGAFKDYAKTDGL 720
>At3g20440.1 68416.m02588 glycoside hydrolase family 13 protein
similar to 1,4-alpha-glucan branching enzyme [Solanum
tuberosum] GI:1621012, 1,4-alpha-glucan branching enzyme
(EC 2.4.1.18) from [Homo sapiens] SP|Q04446, {Solanum
tuberosum} SP|P30924; contains Pfam profiles: PF00128
Alpha amylase catalytic domain, PF02922 Isoamylase
N-terminal domain
Length = 777
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +2
Query: 248 SEPR---FEEIKKEVSSYIKKIGYNPAAVAFVP 337
SEP+ FEE K+V ++K+ GYN + VP
Sbjct: 257 SEPKVSTFEEFTKKVLPHVKRAGYNAIQLIGVP 289
>At3g18370.1 68416.m02336 C2 domain-containing protein contains Pfam
profile: PF00168 C2 domain
Length = 815
Score = 28.3 bits (60), Expect = 6.0
Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 4/68 (5%)
Frame = +3
Query: 273 RRKYPHTSRRLATTQLLSLS---CPFLDGTETTCWSLQPKCLGSR-DGRWSVRKAKLTEN 440
+R SR + QLL S CP L G TCWS + R D W +
Sbjct: 127 KRLRQRRSRLIENIQLLEFSLGSCPPLLGLHGTCWSKSGEQKIMRLDFNWDTTDLSILLQ 186
Query: 441 ASLKLSMP 464
A KLSMP
Sbjct: 187 A--KLSMP 192
>At1g17220.1 68414.m02098 translation initiation factor IF-2,
chloroplast, putative similar to SP|P57997|IF2C_PHAVU
Translation initiation factor IF-2, chloroplast
precursor (PvIF2cp) {Phaseolus vulgaris}
Length = 1026
Score = 28.3 bits (60), Expect = 6.0
Identities = 19/67 (28%), Positives = 29/67 (43%)
Frame = +2
Query: 29 IDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLI 208
+D PGH F G D A+++VAA G QT E A+ ++
Sbjct: 557 LDTPGHEAFGAMRARGARVTDIAIIVVAADDG-------IRPQTNE-AIAHAKAAAVPIV 608
Query: 209 VGVNKMD 229
+ +NK+D
Sbjct: 609 IAINKID 615
>At5g51710.1 68418.m06413 K+ efflux antiporter, putative (KEA5)
Monovalent cation:proton antiporter family 2 (CPA2
family) member, PMID:11500563; related to
glutathione-regulated potassium-efflux system protein
[Escherichia coli] GP|606284|gb|AAA58147
Length = 568
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +2
Query: 254 PRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNM 364
PRF ++ ++SS ++ Y AAVAF +S W D +
Sbjct: 354 PRFLKLMIQLSSQTNEL-YQLAAVAFCLLSAWCSDKL 389
>At5g19490.1 68418.m02322 repressor protein-related similar to
repressor protein [Oryza sativa] GI:18481624
Length = 236
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -3
Query: 546 TVPIPPILYTSCRGRRRGLSVGRAGGRMASRASMR 442
T + + +TSC RRG GR+ GR S S++
Sbjct: 92 TTQMHEVKHTSCGRGRRGRGRGRSSGRTGSGLSLK 126
>At5g13650.2 68418.m01585 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 676
Score = 27.9 bits (59), Expect = 7.9
Identities = 26/81 (32%), Positives = 35/81 (43%)
Frame = +2
Query: 20 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 199
V IID PGH DF + + D +L+V + G QTR A G
Sbjct: 148 VNIIDTPGHSDFGGEVERVLNMVDGVLLVVDSVEGPMP-------QTRFVLKKALEFG-H 199
Query: 200 QLIVGVNKMDSTEPPYSEPRF 262
++V VNK+D P + P F
Sbjct: 200 AVVVVVNKIDR---PSARPEF 217
>At5g13650.1 68418.m01584 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 675
Score = 27.9 bits (59), Expect = 7.9
Identities = 26/81 (32%), Positives = 35/81 (43%)
Frame = +2
Query: 20 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 199
V IID PGH DF + + D +L+V + G QTR A G
Sbjct: 147 VNIIDTPGHSDFGGEVERVLNMVDGVLLVVDSVEGPMP-------QTRFVLKKALEFG-H 198
Query: 200 QLIVGVNKMDSTEPPYSEPRF 262
++V VNK+D P + P F
Sbjct: 199 AVVVVVNKIDR---PSARPEF 216
>At1g26130.1 68414.m03190 haloacid dehalogenase-like hydrolase
family protein similar to Potential
phospholipid-transporting ATPase (EC 3.6.3.1) from Homo
sapiens [SP|Q9Y2Q0, SP|O43520], Mus musculus [SP|P98200,
SP|P70704], {Bos taurus} SP|Q29449; contains InterPro
accession IPR005834: Haloacid dehalogenase-like
hydrolase
Length = 1184
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +2
Query: 131 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSS 289
E+G +TR+H G++ LI+ ++D E R E K VS+
Sbjct: 629 ESGRKYEKETRDHVNEYADAGLRTLILAYRELDENEYEVFTERISEAKNSVSA 681
>At1g18900.2 68414.m02353 pentatricopeptide (PPR) repeat-containing
protein low similarity to 67kD chloroplastic RNA-binding
protein, P67 [Arabidopsis thaliana] GI:9755842; contains
Pfam profile PF01535: PPR repeat
Length = 860
Score = 27.9 bits (59), Expect = 7.9
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = +3
Query: 339 FLDGTETTCWSLQPKCLGSRDGRWSVRKAKLTENASLKLSMPSCHLPAPLTSPCVFPCKT 518
FL+G+ T+ C+ S D ++ +L + A PS LP P C+ P +
Sbjct: 18 FLNGSRTSVTDGN-SCVYSDDENCVSKRQQLRKEAGQTEKRPSSILPKPSVVGCILPGEV 76
Query: 519 YTKSVV 536
TK VV
Sbjct: 77 -TKPVV 81
>At1g18900.1 68414.m02352 pentatricopeptide (PPR) repeat-containing
protein low similarity to 67kD chloroplastic RNA-binding
protein, P67 [Arabidopsis thaliana] GI:9755842; contains
Pfam profile PF01535: PPR repeat
Length = 860
Score = 27.9 bits (59), Expect = 7.9
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = +3
Query: 339 FLDGTETTCWSLQPKCLGSRDGRWSVRKAKLTENASLKLSMPSCHLPAPLTSPCVFPCKT 518
FL+G+ T+ C+ S D ++ +L + A PS LP P C+ P +
Sbjct: 18 FLNGSRTSVTDGN-SCVYSDDENCVSKRQQLRKEAGQTEKRPSSILPKPSVVGCILPGEV 76
Query: 519 YTKSVV 536
TK VV
Sbjct: 77 -TKPVV 81
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,815,607
Number of Sequences: 28952
Number of extensions: 432009
Number of successful extensions: 1544
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 1471
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1524
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1721869952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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