Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0385
         (619 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    23   2.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.7  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   4.7  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    21   6.3  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    21   6.3  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   6.3  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   8.3  

>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = -1

Query: 598 FITYFKASIARELSRCLRVLLDK 530
           FI YF    A   S CLRV   K
Sbjct: 330 FILYFICDEAHYASNCLRVQFQK 352


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 554  VSKSPSR*NYKLPPKPVHSAP 492
            +  +PSR +   PP+PV  AP
Sbjct: 994  IPDNPSREDCTKPPEPVTPAP 1014



 Score = 21.0 bits (42), Expect = 8.3
 Identities = 8/29 (27%), Positives = 14/29 (48%)
 Frame = +2

Query: 167  STERMNWSKAFPSSGWWTASGGSKC*TRR 253
            +T+   W  +  +S WWT +   +  T R
Sbjct: 1036 TTKPSTWWSSTTTSPWWTTTTTRRTTTTR 1064


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 22/90 (24%), Positives = 33/90 (36%)
 Frame = +1

Query: 76   WAGCTIIALLGQQRRFEALDFCYHILRVQRVDGKDELVKGIPLKRMVDRIRRFQVLNSQI 255
            W G  +   +G +       + +  +   R +GK+  +K   LK         Q  N   
Sbjct: 1024 WNGDILGYYVGYRLANSDKPYLFETVEFGREEGKEHHLKISNLKTYTQYSVVVQAFNKVG 1083

Query: 256  FGVLSRQLSADDAAGVEHVRCFPPPQAPLT 345
             G LS  + A  A GV      PP +A  T
Sbjct: 1084 AGPLSDDIKAYTAEGVPEQ---PPDKATCT 1110


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = -2

Query: 471 TAPFRPSAPIRGRYHPLWERLI*VIKKNGIFV 376
           TA +R    ++  Y  +WE+L  V   + +F+
Sbjct: 81  TAAYRSIKRLKKEYPKIWEQLRAVWDPDDVFI 112


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 13/54 (24%), Positives = 21/54 (38%), Gaps = 2/54 (3%)
 Frame = -2

Query: 270 GQHAEDLRVQHLEPPDAVHHPLEGNAFDQFILSVDPLHPQDVVAEV--QRLEPP 115
           G H ++   QH +P     H + G      +    P H Q  + +   Q  +PP
Sbjct: 168 GHHMQEQHPQHHQPHHQQQHMMYGGQQGANMHQQGPPHQQPPIQQQPNQGQQPP 221


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 13/54 (24%), Positives = 21/54 (38%), Gaps = 2/54 (3%)
 Frame = -2

Query: 270 GQHAEDLRVQHLEPPDAVHHPLEGNAFDQFILSVDPLHPQDVVAEV--QRLEPP 115
           G H ++   QH +P     H + G      +    P H Q  + +   Q  +PP
Sbjct: 170 GHHMQEQHPQHHQPHHQQQHMMYGGQQGANMHQQGPPHQQPPIQQQPNQGQQPP 223


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +3

Query: 165 GRRKG*TGQRHSPQADGGPHQ 227
           GR    +GQ+H PQ+D    Q
Sbjct: 16  GRGLKYSGQQHGPQSDSRNQQ 36


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,146
Number of Sequences: 336
Number of extensions: 3117
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)