Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0385
(619 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0307 + 2414709-2414762,2415769-2415841,2416090-2416154,241... 52 3e-07
04_03_0987 - 21460169-21460467,21460934-21461495,21462756-214631... 37 0.011
04_04_0761 + 27841337-27841479,27842220-27842223,27842265-27843371 31 0.97
03_05_1080 + 30229828-30230707,30230861-30231110,30231265-30231499 31 0.97
05_05_0066 - 22094713-22094819,22094904-22095011,22095113-220954... 30 1.3
02_05_0248 + 27145459-27145551,27145824-27145952,27146030-271466... 30 1.3
06_01_0770 - 5756200-5756741,5756790-5757286,5757356-5757782,575... 30 1.7
05_04_0338 - 20392482-20392832,20393236-20393305,20393571-203937... 30 1.7
03_02_0784 - 11154395-11154888,11155284-11155360,11155447-111554... 30 1.7
02_03_0058 + 14536336-14536593,14536715-14536984 29 2.2
03_06_0032 + 31182115-31182390,31182801-31183459,31183597-311837... 29 3.0
12_01_0998 - 10118994-10119310,10120231-10120363 29 3.9
10_08_0406 - 17688069-17690643,17691065-17691132 29 3.9
03_05_1129 - 30595580-30595771,30596119-30597162 29 3.9
09_04_0167 + 15290059-15290188,15290779-15292070 28 5.2
03_02_0104 + 5645285-5645677,5645990-5646034,5646225-5646454,564... 28 5.2
02_05_0795 - 31792231-31794780 28 5.2
12_02_0674 - 21745321-21746223,21746229-21747608 28 6.8
08_02_1138 + 24631919-24632248,24634100-24634502,24634788-246349... 28 6.8
08_01_0971 - 9786247-9786681,9787909-9787969,9788085-9788173 28 6.8
04_04_0030 + 22279716-22280052,22280644-22281144,22281369-222816... 28 6.8
07_01_0567 - 4214196-4214351,4214539-4214845,4215005-4215069,421... 27 9.0
03_01_0587 - 4349150-4350115 27 9.0
01_06_1355 + 36610390-36610479,36611906-36612063,36612144-366125... 27 9.0
>03_01_0307 + 2414709-2414762,2415769-2415841,2416090-2416154,
2416288-2416365,2416880-2416999,2418021-2418091,
2418808-2418900,2419242-2419311,2420236-2420436,
2421345-2421557,2422354-2422440,2422441-2422652,
2422901-2423042,2423424-2423592,2424050-2424126,
2424393-2424563,2425095-2425171,2425299-2425401,
2426066-2426185,2426301-2426444,2426826-2426975,
2427398-2427541,2427816-2427903,2428672-2428799,
2429329-2429533,2429843-2430015,2430174-2430392,
2430490-2430684
Length = 1213
Score = 52.4 bits (120), Expect = 3e-07
Identities = 21/41 (51%), Positives = 28/41 (68%)
Frame = +1
Query: 49 EELFGEGLHWAGCTIIALLGQQRRFEALDFCYHILRVQRVD 171
+E+ G+ + WAGCTI+ LLGQQ+ FE DF Y L V V+
Sbjct: 1089 QEMLGDSVAWAGCTIMYLLGQQQHFELFDFSYQFLNVAEVE 1129
>04_03_0987 -
21460169-21460467,21460934-21461495,21462756-21463190,
21463757-21464185
Length = 574
Score = 37.1 bits (82), Expect = 0.011
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = -3
Query: 329 GGGKQRTCSTPAASSADSCLDSTPKICEFSTWNRLMRSTIRLRGMPL 189
GGG + C TPA+S+ S D P + F W+ L RS + RG PL
Sbjct: 82 GGGLRSLCGTPASSTRLS-FDPHPLV--FDAWDALRRSLVCFRGQPL 125
>04_04_0761 + 27841337-27841479,27842220-27842223,27842265-27843371
Length = 417
Score = 30.7 bits (66), Expect = 0.97
Identities = 19/36 (52%), Positives = 21/36 (58%)
Frame = -2
Query: 231 PPDAVHHPLEGNAFDQFILSVDPLHPQDVVAEVQRL 124
PPDAV +EG DQ IL V LH + EVQRL
Sbjct: 213 PPDAVLKEIEGMRTDQAILEV--LHWSEDPQEVQRL 246
>03_05_1080 + 30229828-30230707,30230861-30231110,30231265-30231499
Length = 454
Score = 30.7 bits (66), Expect = 0.97
Identities = 27/78 (34%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Frame = +3
Query: 24 GRRHPVYRRGTVRRGSPLGRLHHHRSPGAAEEVRGAGLL-LPHPEGAEGRRKG*TGQRHS 200
G H R G V G +G + PG EEV GA +P G +G R Q
Sbjct: 292 GFGHVRRRDGDVGVGVGVGDVRADAEPGGDEEVAGADPRGVPQEGGGDGGRPA-GKQPEV 350
Query: 201 PQA-DGGPHQAVPSAELA 251
P+A D G QA P+ +A
Sbjct: 351 PEASDQGGAQAAPTGTVA 368
>05_05_0066 -
22094713-22094819,22094904-22095011,22095113-22095437,
22095520-22095885,22095959-22096159
Length = 368
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +3
Query: 102 PGAAEEVRGAGLLLPHPEGAEGRRKG*TG 188
PGA E G G+ LP P GA K TG
Sbjct: 270 PGAKRERNGTGVFLPRPAGAPAEPKRKTG 298
>02_05_0248 +
27145459-27145551,27145824-27145952,27146030-27146695,
27147170-27147756,27147882-27148225,27148808-27148815
Length = 608
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/53 (28%), Positives = 29/53 (54%)
Frame = +1
Query: 139 CYHILRVQRVDGKDELVKGIPLKRMVDRIRRFQVLNSQIFGVLSRQLSADDAA 297
C+HI+ V R + ++EL +KR R++R V + Q + + + + +AA
Sbjct: 462 CHHIILVLRGENQNELPTAYIMKRWEKRVKRENVYDEQGNLIEEKPIDSSEAA 514
>06_01_0770 -
5756200-5756741,5756790-5757286,5757356-5757782,
5757854-5757911
Length = 507
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/40 (45%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +1
Query: 304 EH-VRCFPPPQAPLTLN*AAARPELDENSIFFYYLDQPFP 420
EH +RCF PP AP L AAA + NS Y D P
Sbjct: 52 EHCLRCFAPPDAPFVLGAAAAIHLGNTNSCIAGYDDDDAP 91
>05_04_0338 -
20392482-20392832,20393236-20393305,20393571-20393790,
20394249-20394342,20394754-20394865,20395081-20395487
Length = 417
Score = 29.9 bits (64), Expect = 1.7
Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Frame = -3
Query: 365 RAAAQLSVSGACGGGKQRTCSTPAASSADSCLDSTPKICEFSTWNRL-MRSTIRLRGMPL 189
RAAA GG T AASS S L+ + C TW + M +R G PL
Sbjct: 62 RAAAGDGGGNGSGGVSTGTVDPAAASSPSSSLEELYRSCATWTWRGMRMNYLVRGEGPPL 121
>03_02_0784 -
11154395-11154888,11155284-11155360,11155447-11155497,
11155599-11155672,11156127-11156215,11156533-11156618,
11157570-11157669,11158540-11158622,11158776-11159194
Length = 490
Score = 29.9 bits (64), Expect = 1.7
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
Frame = -2
Query: 231 PPDAVHHPLEGNAFDQFILSV--DPLHPQDV-VAEVQRLEPPLLPQESD---DGAAGPME 70
P DA+ +P +G ++D F+L V P HP V VA+ L LLP S +GA+ M
Sbjct: 20 PADALIYPFDGLSYDDFVLPVAAAPQHPLPVAVADPAPL--LLLPPPSSCTCNGASSGMG 77
Query: 69 TLAEQFL 49
+A + L
Sbjct: 78 AVAPRTL 84
>02_03_0058 + 14536336-14536593,14536715-14536984
Length = 175
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = -1
Query: 532 KITNCLPNLYTAPPIFFWVSYRPL*AFSAHKGALSPTLGKADLSNKK 392
K NC L + WV P A HK L T G+A++ NK+
Sbjct: 51 KSRNCEYILVAVDYVSKWVEAMPCSAADVHKNHLPKTCGQAEILNKQ 97
>03_06_0032 +
31182115-31182390,31182801-31183459,31183597-31183740,
31184025-31184061
Length = 371
Score = 29.1 bits (62), Expect = 3.0
Identities = 19/62 (30%), Positives = 26/62 (41%)
Frame = +3
Query: 60 RRGSPLGRLHHHRSPGAAEEVRGAGLLLPHPEGAEGRRKG*TGQRHSPQADGGPHQAVPS 239
R G P+ ++ S G +E+ G HP E RR G S A G H A +
Sbjct: 221 RDGCPVKKIVERSSDGCIKEITYKGRH-SHPRPVEPRRGGAASSSSSAMAAGTDHNAGAA 279
Query: 240 AE 245
A+
Sbjct: 280 AD 281
>12_01_0998 - 10118994-10119310,10120231-10120363
Length = 149
Score = 28.7 bits (61), Expect = 3.9
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = -3
Query: 329 GGGKQRTCSTPAASSADSCLDSTPKICEFSTWNRLMRSTIRLRGMPLTSSSFPSTLCTL 153
GGG +P + A + + P IC+ NRL +R R +P T SS C L
Sbjct: 47 GGGGLVAALSPPSDPAGGEVATAPYICQIRKENRL-PERMRRRTLPSTPSSGKEGSCLL 104
>10_08_0406 - 17688069-17690643,17691065-17691132
Length = 880
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 70 LHWAGCTIIALLGQQRRFEALDFCYHIL 153
L W G I A L +Q R E L+F Y++L
Sbjct: 176 LVWVGYLIFANLARQTRTETLEFRYYLL 203
>03_05_1129 - 30595580-30595771,30596119-30597162
Length = 411
Score = 28.7 bits (61), Expect = 3.9
Identities = 19/48 (39%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = -2
Query: 378 VEFWSRGGSVERKRRLRGREAAHVLDAGRVVRGQLPGQ-HAEDLRVQH 238
V F + GGS K LR AAHVL G +V P H V H
Sbjct: 90 VSFEAVGGSCAVKMELRNGSAAHVLLPGGLVTSYKPAMWHGAPTEVIH 137
>09_04_0167 + 15290059-15290188,15290779-15292070
Length = 473
Score = 28.3 bits (60), Expect = 5.2
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = -3
Query: 347 SVSGACGGGKQRTCS 303
S +GACGGG+Q +CS
Sbjct: 194 SAAGACGGGEQPSCS 208
>03_02_0104 +
5645285-5645677,5645990-5646034,5646225-5646454,
5646549-5646624,5646705-5646781,5646960-5646990,
5647058-5647210,5647287-5647421,5647526-5647606
Length = 406
Score = 28.3 bits (60), Expect = 5.2
Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = +3
Query: 96 RSPGAAEEVRGAGLLLPHPE-GAEG--RRKG*TGQRHSPQADGGPHQAVPSA 242
R P A + R + P + GA G R G G P A GGP Q VP+A
Sbjct: 60 REPDAGQASREPDVAGPSRQPGAAGPSREPGAAGGPRQPGAAGGPWQLVPNA 111
>02_05_0795 - 31792231-31794780
Length = 849
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -2
Query: 165 PLHPQDVVAEVQRLEPPLLPQESDDGAAGPMETL 64
PL P+ V AE PP+ P + D+G A E +
Sbjct: 10 PLQPEAVSAEASEPPPPV-PMDQDEGQAAAAEAM 42
>12_02_0674 - 21745321-21746223,21746229-21747608
Length = 760
Score = 27.9 bits (59), Expect = 6.8
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = -3
Query: 311 TCSTPAASSADSCLDSTPKICEFSTWNRLMRSTIRLRGMPLTSSSFPSTLCTLRM 147
T ST S+A + STP+ ST + ST R + ++S PST T +
Sbjct: 511 TASTRELSTATGKIPSTPRTNPLSTATSKIPSTPRTSLLSSSTSKIPSTPSTCEL 565
>08_02_1138 +
24631919-24632248,24634100-24634502,24634788-24634982,
24635384-24635838,24636119-24636349,24636891-24637123,
24637899-24637971
Length = 639
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +3
Query: 48 RGTVRRGSPLGRLHHHRSPGAAEEVRGAG 134
R RR S GR H H + GAA RG G
Sbjct: 39 RSLDRRLSSRGRHHRHAAEGAAASPRGGG 67
>08_01_0971 - 9786247-9786681,9787909-9787969,9788085-9788173
Length = 194
Score = 27.9 bits (59), Expect = 6.8
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = -3
Query: 182 SSFPSTLCTLRMW*QKSSASNLLCCPRRAMMVQPAQWRPSPNSSSTVNWVSPTGMQ 15
S FP L W + + LC P+ A +QPA +++ + W++PT Q
Sbjct: 107 SQFPIRQFFLHAWGRVDDGTMRLCSPQPAPTLQPA---GHIRTATLLQWLAPTTYQ 159
>04_04_0030 +
22279716-22280052,22280644-22281144,22281369-22281692,
22281860-22281945,22282105-22282517,22282612-22282878,
22282977-22283730
Length = 893
Score = 27.9 bits (59), Expect = 6.8
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = +3
Query: 45 RRGTVRRGSPLGRLHHHR--SPGAAEEVRGAGLLLPHPEGAEGR 170
RR T R +P+G L +P E+ RGAG HP+ R
Sbjct: 26 RRRTARSTAPVGALVERVVVAPAPVEQQRGAGRPEAHPQSVAAR 69
>07_01_0567 -
4214196-4214351,4214539-4214845,4215005-4215069,
4215406-4215471,4215594-4215639,4215671-4216200
Length = 389
Score = 27.5 bits (58), Expect = 9.0
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -2
Query: 273 PGQHAEDLRVQHLEPPDAVHHPLE 202
PG ED+R LEP + HH L+
Sbjct: 83 PGHWTEDMRDDALEPAELYHHGLK 106
>03_01_0587 - 4349150-4350115
Length = 321
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -3
Query: 362 AAAQLSVSGACGGGKQRTCSTPAASSADSCLDST 261
AAAQ ++ A GG K+R S P +S D L ++
Sbjct: 220 AAAQQALLDAAGGAKKRPRSEPHVTSDDEVLPAS 253
>01_06_1355 +
36610390-36610479,36611906-36612063,36612144-36612523,
36612600-36613583,36614228-36614292,36614946-36615024,
36615480-36615529,36616595-36616781,36617922-36617957,
36619226-36619348,36619466-36620386,36620506-36620636
Length = 1067
Score = 27.5 bits (58), Expect = 9.0
Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Frame = -2
Query: 270 GQHAEDLRVQHLEPPDAVHHPLEGNA-FDQFILSVDPL-HPQDVVAEVQRLEPPLLPQES 97
G HA+ + L PD + PL NA F + V L + D++A L P++
Sbjct: 574 GNHADPAHILQLASPDPIFKPLTRNAWFRVESMRVSRLCNSTDIIAVNGLLPGPMIEVNE 633
Query: 96 DDGAA 82
D A
Sbjct: 634 GDAVA 638
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,926,526
Number of Sequences: 37544
Number of extensions: 443545
Number of successful extensions: 1677
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1612
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1674
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1490248872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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