Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0385
         (619 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    26   0.85 
AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR prot...    24   3.4  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    24   4.5  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    24   4.5  

>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 26.2 bits (55), Expect = 0.85
 Identities = 9/32 (28%), Positives = 18/32 (56%)
 Frame = -1

Query: 562 LSRCLRVLLDKITNCLPNLYTAPPIFFWVSYR 467
           LSR   V ++++++  P   T P +++W   R
Sbjct: 284 LSRACDVAMERVSSSTPYYQTKPQVYWWTPER 315


>AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR
           protein.
          Length = 502

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -2

Query: 240 HLEPPDAVHHPLE 202
           H +PP  VHHP +
Sbjct: 85  HYQPPPTVHHPAD 97


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +1

Query: 91   IIALLGQQRRFEALDFCYH 147
            I  L+ + +  +A+DFCYH
Sbjct: 2349 IAELVKEPKPLKAIDFCYH 2367


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = +3

Query: 90  HHRSPGAAEEVRGAGLLLPH 149
           HH SPG    V GA L   H
Sbjct: 479 HHVSPGMGSTVNGASLTHSH 498


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 658,571
Number of Sequences: 2352
Number of extensions: 14681
Number of successful extensions: 53
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60553008
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)