Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0385
(619 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF038619-5|AAB92078.6| 1262|Caenorhabditis elegans Gut on exteri... 135 2e-32
AB073209-1|BAB70472.1| 1262|Caenorhabditis elegans rac effector ... 135 2e-32
U97189-9|AAC48161.1| 263|Caenorhabditis elegans Hypothetical pr... 29 2.0
AL117193-12|CAB60305.1| 415|Caenorhabditis elegans Hypothetical... 29 2.7
Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical pr... 28 6.1
U80445-11|AAB37801.2| 479|Caenorhabditis elegans Hypothetical p... 28 6.1
AL031633-15|CAD92399.1| 139|Caenorhabditis elegans Hypothetical... 28 6.1
AL031633-14|CAA21032.1| 903|Caenorhabditis elegans Hypothetical... 28 6.1
AL031633-13|CAA21027.1| 951|Caenorhabditis elegans Hypothetical... 28 6.1
AL031633-12|CAA21026.2| 1107|Caenorhabditis elegans Hypothetical... 28 6.1
AJ132701-1|CAA10737.1| 1107|Caenorhabditis elegans centaurin gam... 28 6.1
AJ132700-1|CAA10736.1| 952|Caenorhabditis elegans centaurin gam... 28 6.1
Z70035-4|CAA93864.2| 410|Caenorhabditis elegans Hypothetical pr... 27 8.1
>AF038619-5|AAB92078.6| 1262|Caenorhabditis elegans Gut on exterior
protein 2 protein.
Length = 1262
Score = 135 bits (327), Expect = 2e-32
Identities = 67/123 (54%), Positives = 82/123 (66%), Gaps = 1/123 (0%)
Frame = +1
Query: 1 LQFLYCIPV-GDTQFTVEELFGEGLHWAGCTIIALLGQQRRFEALDFCYHILRVQRVDGK 177
LQF C P D + EELFG+ L W G T+I LLGQ RRFE LDFCYH+ RV + DGK
Sbjct: 1139 LQFFLCQPTRDDNEVYAEELFGDSLQWGGLTLITLLGQHRRFEVLDFCYHLHRVNKADGK 1198
Query: 178 DELVKGIPLKRMVDRIRRFQVLNSQIFGVLSRQLSADDAAGVEHVRCFPPPQAPLTLN*A 357
DE++ GI L +MV+RIRRFQ+LN+QIF +L QL+ ++ E VR F PP P N A
Sbjct: 1199 DEVISGIRLAKMVERIRRFQLLNNQIFIILENQLNENNDDPNERVREFAPPVHPNYANHA 1258
Query: 358 AAR 366
A R
Sbjct: 1259 ARR 1261
>AB073209-1|BAB70472.1| 1262|Caenorhabditis elegans rac effector
protein.
Length = 1262
Score = 135 bits (327), Expect = 2e-32
Identities = 67/123 (54%), Positives = 82/123 (66%), Gaps = 1/123 (0%)
Frame = +1
Query: 1 LQFLYCIPV-GDTQFTVEELFGEGLHWAGCTIIALLGQQRRFEALDFCYHILRVQRVDGK 177
LQF C P D + EELFG+ L W G T+I LLGQ RRFE LDFCYH+ RV + DGK
Sbjct: 1139 LQFFLCQPTRDDNEVYAEELFGDSLQWGGLTLITLLGQHRRFEVLDFCYHLHRVNKADGK 1198
Query: 178 DELVKGIPLKRMVDRIRRFQVLNSQIFGVLSRQLSADDAAGVEHVRCFPPPQAPLTLN*A 357
DE++ GI L +MV+RIRRFQ+LN+QIF +L QL+ ++ E VR F PP P N A
Sbjct: 1199 DEVISGIRLAKMVERIRRFQLLNNQIFIILENQLNENNDDPNERVREFAPPVHPNYANHA 1258
Query: 358 AAR 366
A R
Sbjct: 1259 ARR 1261
>U97189-9|AAC48161.1| 263|Caenorhabditis elegans Hypothetical
protein C48B6.9 protein.
Length = 263
Score = 29.5 bits (63), Expect = 2.0
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = -3
Query: 341 SGACGGGKQRTCSTPAASSADSCLDSTPKICEFSTWNRLM-RSTIRLRGMPLTSSSFPST 165
S +CGGGK + + + DS P + + ++ NR+M R T+ + L S S
Sbjct: 34 SVSCGGGKGIGTTGTYSGAGGQVSDSHPSVLDLNSENRVMDRKTVHWNMLLLLFMSVCSA 93
Query: 164 LCTL 153
L T+
Sbjct: 94 LFTV 97
>AL117193-12|CAB60305.1| 415|Caenorhabditis elegans Hypothetical
protein Y105C5A.23 protein.
Length = 415
Score = 29.1 bits (62), Expect = 2.7
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +2
Query: 479 PEKNWGRCVQVWE 517
PE NW +C+Q+WE
Sbjct: 180 PEYNWSQCLQIWE 192
>Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical
protein C34F6.1 protein.
Length = 1043
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +2
Query: 203 SSGWWTASGGSKC*TRRSSACCPGSCP 283
S+G W G SK SS CCPG+ P
Sbjct: 432 SAGHWCHIGASK----ESSVCCPGASP 454
>U80445-11|AAB37801.2| 479|Caenorhabditis elegans Hypothetical
protein C50F2.8 protein.
Length = 479
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = -1
Query: 577 SIARELSRCLRVLLDKITN 521
S A LSRCL VLL+KI N
Sbjct: 12 SNAENLSRCLHVLLEKIEN 30
>AL031633-15|CAD92399.1| 139|Caenorhabditis elegans Hypothetical
protein Y39A1A.15d protein.
Length = 139
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +1
Query: 280 SADDAAGVEHVRCFPPPQAPLTLN*AAARPELDENSI 390
S D+ G + PPPQ P +PELDE S+
Sbjct: 103 SGDEMYGSRRISMGPPPQVP-ARRYLPQQPELDETSV 138
>AL031633-14|CAA21032.1| 903|Caenorhabditis elegans Hypothetical
protein Y39A1A.15c protein.
Length = 903
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +1
Query: 280 SADDAAGVEHVRCFPPPQAPLTLN*AAARPELDENSI 390
S D+ G + PPPQ P +PELDE S+
Sbjct: 867 SGDEMYGSRRISMGPPPQVP-ARRYLPQQPELDETSV 902
>AL031633-13|CAA21027.1| 951|Caenorhabditis elegans Hypothetical
protein Y39A1A.15b protein.
Length = 951
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +1
Query: 280 SADDAAGVEHVRCFPPPQAPLTLN*AAARPELDENSI 390
S D+ G + PPPQ P +PELDE S+
Sbjct: 915 SGDEMYGSRRISMGPPPQVP-ARRYLPQQPELDETSV 950
>AL031633-12|CAA21026.2| 1107|Caenorhabditis elegans Hypothetical
protein Y39A1A.15a protein.
Length = 1107
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +1
Query: 280 SADDAAGVEHVRCFPPPQAPLTLN*AAARPELDENSI 390
S D+ G + PPPQ P +PELDE S+
Sbjct: 1071 SGDEMYGSRRISMGPPPQVP-ARRYLPQQPELDETSV 1106
>AJ132701-1|CAA10737.1| 1107|Caenorhabditis elegans centaurin gamma 1B
protein.
Length = 1107
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +1
Query: 280 SADDAAGVEHVRCFPPPQAPLTLN*AAARPELDENSI 390
S D+ G + PPPQ P +PELDE S+
Sbjct: 1071 SGDEMYGSRRISMGPPPQVP-ARRYLPQQPELDETSV 1106
>AJ132700-1|CAA10736.1| 952|Caenorhabditis elegans centaurin gamma 1A
protein.
Length = 952
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +1
Query: 280 SADDAAGVEHVRCFPPPQAPLTLN*AAARPELDENSI 390
S D+ G + PPPQ P +PELDE S+
Sbjct: 916 SGDEMYGSRRISMGPPPQVP-ARRYLPQQPELDETSV 951
>Z70035-4|CAA93864.2| 410|Caenorhabditis elegans Hypothetical
protein R09D1.4 protein.
Length = 410
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -2
Query: 93 DGAAGPMETLAEQFLDGKLGVADRNAVQE 7
DG+ GP+ L LD KL VAD + E
Sbjct: 277 DGSTGPLSPLYSGHLDKKLNVADADENSE 305
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,399,264
Number of Sequences: 27780
Number of extensions: 309914
Number of successful extensions: 1013
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 969
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1013
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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