Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0382
(529 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41104-5|AAK18976.3| 1564|Caenorhabditis elegans Twik family of ... 32 0.29
Z99278-4|CAB16492.1| 871|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z99278-3|CAB16493.1| 867|Caenorhabditis elegans Hypothetical pr... 30 1.2
AC024202-1|AAF36029.1| 285|Caenorhabditis elegans Hypothetical ... 30 1.2
U41624-4|AAF99945.1| 322|Caenorhabditis elegans Hypothetical pr... 28 3.6
AL032657-9|CAA21736.1| 829|Caenorhabditis elegans Hypothetical ... 28 3.6
U61951-3|AAB03158.4| 1783|Caenorhabditis elegans Egg laying defe... 28 4.8
U61951-2|AAM75372.1| 1877|Caenorhabditis elegans Egg laying defe... 28 4.8
AF023602-1|AAC47755.1| 1783|Caenorhabditis elegans putative L-ty... 28 4.8
AL117207-10|CAB60402.1| 159|Caenorhabditis elegans Hypothetical... 27 6.3
AL021497-20|CAA16410.3| 1057|Caenorhabditis elegans Hypothetical... 27 6.3
AL021497-19|CAA16406.2| 989|Caenorhabditis elegans Hypothetical... 27 6.3
AL033514-22|CAA22106.3| 1353|Caenorhabditis elegans Hypothetical... 27 8.3
AF183401-1|AAF13189.1| 1353|Caenorhabditis elegans TIM-1 protein. 27 8.3
>U41104-5|AAK18976.3| 1564|Caenorhabditis elegans Twik family of
potassium channelsprotein 2 protein.
Length = 1564
Score = 31.9 bits (69), Expect = 0.29
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +2
Query: 146 ERLLKSYTKCLLNQGPCTAELKKIKDKIPEALETHCAKCTDKQKQMAKQLAQGIKK 313
E + K KC N C ++K+ K + ++ C KC K+ AK + + KK
Sbjct: 1265 ENVQKMCKKCAKNVQKCAKNVQKMCKKCAKNVQKMCKKCAKMCKKCAKNVQKMCKK 1320
>Z99278-4|CAB16492.1| 871|Caenorhabditis elegans Hypothetical
protein Y53C12B.3b protein.
Length = 871
Score = 29.9 bits (64), Expect = 1.2
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +2
Query: 185 QGPCTAELKKIKDKIPEALETHCAKCTDKQKQMAKQLAQGIKKTHPELWDE 337
+ P T +++ KD + E HC +C Q + + I+K + +LW E
Sbjct: 679 ENPKTDDIQS-KDDVTSKSELHCYRCEHYQLPAEEVSSHNIRKDNGDLWCE 728
>Z99278-3|CAB16493.1| 867|Caenorhabditis elegans Hypothetical
protein Y53C12B.3a protein.
Length = 867
Score = 29.9 bits (64), Expect = 1.2
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +2
Query: 185 QGPCTAELKKIKDKIPEALETHCAKCTDKQKQMAKQLAQGIKKTHPELWDE 337
+ P T +++ KD + E HC +C Q + + I+K + +LW E
Sbjct: 676 ENPKTDDIQS-KDDVTSKSELHCYRCEHYQLPAEEVSSHNIRKDNGDLWCE 725
>AC024202-1|AAF36029.1| 285|Caenorhabditis elegans Hypothetical
protein Y71H2B.8 protein.
Length = 285
Score = 29.9 bits (64), Expect = 1.2
Identities = 15/62 (24%), Positives = 33/62 (53%)
Frame = -2
Query: 255 AQWVSKASGILSLIFFNSAVQGP*FSKHLVYDLRSLSLLKTSEASKLSSLVRICLEPVRL 76
A+ K +SLIFF+ ++ K + ++ + +EA +++ L+++ L+ +R
Sbjct: 108 AESFCKKMASVSLIFFSRKIENKLIVKSIFKKTEKFTVTRKTEAEEINFLIKVVLKILRH 167
Query: 75 RI 70
RI
Sbjct: 168 RI 169
>U41624-4|AAF99945.1| 322|Caenorhabditis elegans Hypothetical
protein F46C8.7 protein.
Length = 322
Score = 28.3 bits (60), Expect = 3.6
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +1
Query: 310 EDTPGVMGRVHYFLRPSRKISNFFQRFS*VL 402
E+ P V+GR H L+P N++++F V+
Sbjct: 155 ENDPRVIGRAHSILKPYGLAGNYWEKFGEVM 185
>AL032657-9|CAA21736.1| 829|Caenorhabditis elegans Hypothetical
protein Y47H9C.9 protein.
Length = 829
Score = 28.3 bits (60), Expect = 3.6
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +2
Query: 143 NERLLKSYTKCLLNQGPCTAELKKIKDKIPEALETHCAKCTDKQKQMAKQL 295
NE+L + + L + +LKKI+DK+ K DK K + ++L
Sbjct: 20 NEKLTRDVSDAKLLKEDAEIKLKKIRDKLNGEHSEKLGKLNDKYKAVQEEL 70
>U61951-3|AAB03158.4| 1783|Caenorhabditis elegans Egg laying
defective protein 19,isoform a protein.
Length = 1783
Score = 27.9 bits (59), Expect = 4.8
Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 10/80 (12%)
Frame = -1
Query: 424 LKYCFIYLRLKKIFERSLIFS---LRVVKSNELVP*LR---VCLLNSLRKLFRHLLL--- 272
L++ +Y L K S++ S LR+ K + LR LLNSLR + LLL
Sbjct: 550 LEFVLVYFDLMKPLGVSVLRSARLLRIFKVTKYWTSLRNLVSSLLNSLRSIISLLLLLFL 609
Query: 271 FISTFRTMGLQSF-WNFIFN 215
FI F +G+Q F F FN
Sbjct: 610 FIVIFALLGMQVFGGKFNFN 629
>U61951-2|AAM75372.1| 1877|Caenorhabditis elegans Egg laying
defective protein 19,isoform b protein.
Length = 1877
Score = 27.9 bits (59), Expect = 4.8
Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 10/80 (12%)
Frame = -1
Query: 424 LKYCFIYLRLKKIFERSLIFS---LRVVKSNELVP*LR---VCLLNSLRKLFRHLLL--- 272
L++ +Y L K S++ S LR+ K + LR LLNSLR + LLL
Sbjct: 550 LEFVLVYFDLMKPLGVSVLRSARLLRIFKVTKYWTSLRNLVSSLLNSLRSIISLLLLLFL 609
Query: 271 FISTFRTMGLQSF-WNFIFN 215
FI F +G+Q F F FN
Sbjct: 610 FIVIFALLGMQVFGGKFNFN 629
>AF023602-1|AAC47755.1| 1783|Caenorhabditis elegans putative L-type
calcium channelalpha 1 subunit protein.
Length = 1783
Score = 27.9 bits (59), Expect = 4.8
Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 10/80 (12%)
Frame = -1
Query: 424 LKYCFIYLRLKKIFERSLIFS---LRVVKSNELVP*LR---VCLLNSLRKLFRHLLL--- 272
L++ +Y L K S++ S LR+ K + LR LLNSLR + LLL
Sbjct: 550 LEFVLVYFDLMKPLGVSVLRSARLLRIFKVTKYWTSLRNLVSSLLNSLRSIISLLLLLFL 609
Query: 271 FISTFRTMGLQSF-WNFIFN 215
FI F +G+Q F F FN
Sbjct: 610 FIVIFALLGMQVFGGKFNFN 629
>AL117207-10|CAB60402.1| 159|Caenorhabditis elegans Hypothetical
protein Y60A3A.18 protein.
Length = 159
Score = 27.5 bits (58), Expect = 6.3
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Frame = +2
Query: 98 IRTNDDSFDAS-EVLSNERLLKSYTKCLLNQGPCTAELKKIKDKIPEALETHCAKCTDKQ 274
I ++D +F S +V+S + + +T T L K+ I E + T C D +
Sbjct: 13 ISSDDKTFTVSRKVISQSKTISGFTS------EDTIPLPKVTSAILEKIITWCEHHADDE 66
Query: 275 KQMAKQLAQGIKKT-HPELWD-EFI 343
+ +++ +G KKT WD EF+
Sbjct: 67 PKKVEKIEKGNKKTVEISEWDAEFM 91
>AL021497-20|CAA16410.3| 1057|Caenorhabditis elegans Hypothetical
protein Y51A2D.7b protein.
Length = 1057
Score = 27.5 bits (58), Expect = 6.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -3
Query: 149 FRYSRLQKHQSCHHWF 102
F Y+ L H+S HHWF
Sbjct: 80 FHYTGLLIHESAHHWF 95
>AL021497-19|CAA16406.2| 989|Caenorhabditis elegans Hypothetical
protein Y51A2D.7a protein.
Length = 989
Score = 27.5 bits (58), Expect = 6.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -3
Query: 149 FRYSRLQKHQSCHHWF 102
F Y+ L H+S HHWF
Sbjct: 80 FHYTGLLIHESAHHWF 95
>AL033514-22|CAA22106.3| 1353|Caenorhabditis elegans Hypothetical
protein Y75B8A.22 protein.
Length = 1353
Score = 27.1 bits (57), Expect = 8.3
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +2
Query: 197 TAELKKIKDKIPEALETHCAKCTDKQKQMAK 289
TAE KK +++ + +E H K T K+K ++
Sbjct: 240 TAEQKKTEEEFRKIIENHVVKETQKRKSFSR 270
>AF183401-1|AAF13189.1| 1353|Caenorhabditis elegans TIM-1 protein.
Length = 1353
Score = 27.1 bits (57), Expect = 8.3
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +2
Query: 197 TAELKKIKDKIPEALETHCAKCTDKQKQMAK 289
TAE KK +++ + +E H K T K+K ++
Sbjct: 240 TAEQKKTEEEFRKIIENHVVKETQKRKSFSR 270
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,987,427
Number of Sequences: 27780
Number of extensions: 220709
Number of successful extensions: 725
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 725
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1038911524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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