Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0381
         (746 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8EX37 Cluster: Pseudouridine synthase; n=1; Mycoplasma...    37   0.46 
UniRef50_Q4Y4D0 Cluster: Putative uncharacterized protein; n=4; ...    34   3.2  
UniRef50_Q8I3C5 Cluster: Putative uncharacterized protein PFI011...    33   7.5  

>UniRef50_Q8EX37 Cluster: Pseudouridine synthase; n=1; Mycoplasma
           penetrans|Rep: Pseudouridine synthase - Mycoplasma
           penetrans
          Length = 301

 Score = 37.1 bits (82), Expect = 0.46
 Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
 Frame = +1

Query: 436 LR*SYCKT*PIINVVDINKTQLILKKKKNTKCRYSKNQNGGRCQLTNFLKQFFYDKKSLM 615
           L+ ++ +  PI+NV+  +K  +++ K +   C+  KN+      L N +K++ Y+KK   
Sbjct: 72  LKLNFLEAKPILNVIYEDKNIIVVNKPRGLICQPDKNEKID--TLNNRIKKYLYEKKDKN 129

Query: 616 FIEPSKTCYGQVKLIT--CVMKCNWK 687
           ++E +  C+   K  T  CV   N K
Sbjct: 130 YLE-ANLCHRLDKYTTGLCVAAKNQK 154


>UniRef50_Q4Y4D0 Cluster: Putative uncharacterized protein; n=4;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 645

 Score = 34.3 bits (75), Expect = 3.2
 Identities = 18/57 (31%), Positives = 31/57 (54%)
 Frame = +1

Query: 562 CQLTNFLKQFFYDKKSLMFIEPSKTCYGQVKLITCVMKCNWKN*EINKCIECNFVRI 732
           C+  + +  + Y  K ++ IE +  C   +KLI  ++ CN+ N  I K I CN ++I
Sbjct: 163 CKYQDIVTSYIY--KKIINIESADKCMKLIKLIRMLIFCNYSNVHIYKDI-CNIIKI 216


>UniRef50_Q8I3C5 Cluster: Putative uncharacterized protein PFI0110c;
           n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein PFI0110c - Plasmodium falciparum
           (isolate 3D7)
          Length = 608

 Score = 33.1 bits (72), Expect = 7.5
 Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 6/67 (8%)
 Frame = +1

Query: 520 NTKCRYSKNQNGGRCQLTNFLKQFFYD----KKSLMFIEPSK--TCYGQVKLITCVMKCN 681
           N   +Y KNQN  RCQ  N +    YD    KK L+F E +K    Y  +K+I      N
Sbjct: 122 NENSKYEKNQNNLRCQDNNNIVSRIYDNGMNKKELLFTEYNKKDDSYIYMKVIDITPNKN 181

Query: 682 WKN*EIN 702
            +N   N
Sbjct: 182 NENLNAN 188


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 606,630,053
Number of Sequences: 1657284
Number of extensions: 10593306
Number of successful extensions: 22062
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22032
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61323318355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)