Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0381
         (746 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_56553| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.0  
SB_11636| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.2  
SB_1465| Best HMM Match : PAN (HMM E-Value=0.012)                      28   9.2  

>SB_56553| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 426

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
 Frame = -2

Query: 160 KEC*DLNMINYIDNGIFTS*FKKDKKNTIY--FSRTPMKTWPLL 35
           K C D   I   +NGI+T     DK+ ++Y  F   P   W L+
Sbjct: 214 KSCLDFLKIGITENGIYTITRSDDKQFSVYCDFRSEPAAAWTLV 257


>SB_11636| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 99

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = +1

Query: 475 VVDINKTQLILKKKKNTKCRYSKNQNGGRCQL 570
           VV I+  +  L+  +N   RYSKNQ G +CQ+
Sbjct: 40  VVQISVPRAGLQAAQNA--RYSKNQTGSKCQI 69


>SB_1465| Best HMM Match : PAN (HMM E-Value=0.012)
          Length = 406

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
 Frame = -2

Query: 160 KEC*DLNMINYIDNGIFTS*FKKDKKNTIY--FSRTPMKTWPLL 35
           K C D   I   +NGI+T     DK+ ++Y  F   P   W L+
Sbjct: 203 KSCLDFLKIGITENGIYTITGSDDKQFSVYCDFRSEPPAAWTLV 246


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,634,344
Number of Sequences: 59808
Number of extensions: 315646
Number of successful extensions: 520
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 483
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 520
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2022185256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)