Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0380
         (785 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1269 + 32272290-32272321,32272924-32274143,32274390-322744...    29   3.2  
09_06_0198 - 21496692-21496991,21497111-21497258,21497341-214975...    29   4.2  
07_03_1712 + 28932328-28932502,28932583-28932902,28933405-28933950     28   7.3  

>04_04_1269 +
           32272290-32272321,32272924-32274143,32274390-32274433,
           32274883-32275093,32275176-32275413,32275498-32275585,
           32275865-32276020,32276370-32276444
          Length = 687

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 8/25 (32%), Positives = 17/25 (68%)
 Frame = -3

Query: 690 YESILIKYVGNYLYHQWHNSSKAWS 616
           Y  ++I Y+GN+ +  W++S  +W+
Sbjct: 248 YTRVMIDYMGNFRFMSWNSSLSSWT 272


>09_06_0198 - 21496692-21496991,21497111-21497258,21497341-21497578,
            21497679-21497889,21497977-21498170,21498263-21498364,
            21498525-21499879,21501193-21501494,21501600-21501750,
            21501838-21502102,21502155-21502362,21502467-21502660,
            21502749-21502850,21503481-21503680,21504010-21504846,
            21505806-21506107,21506209-21506359,21506447-21506684,
            21506764-21506971,21507078-21507271,21507322-21507462,
            21513484-21514811,21515923-21516227,21516331-21516481,
            21516570-21516807,21516881-21517088,21517197-21517366,
            21517451-21517549,21517708-21519029,21521601-21521683
          Length = 3314

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -3

Query: 690  YESILIKYVGNYLYHQWHNSSKAW 619
            Y   +I Y G Y + +W+ SS AW
Sbjct: 1125 YTRYVITYAGKYQFQRWNISSSAW 1148



 Score = 27.9 bits (59), Expect = 9.7
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -3

Query: 678 LIKYVGNYLYHQWHNSSKAWS 616
           ++ Y G Y    W NSS AW+
Sbjct: 293 VLTYAGKYQLQSWDNSSSAWA 313


>07_03_1712 + 28932328-28932502,28932583-28932902,28933405-28933950
          Length = 346

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -1

Query: 782 VLHAFTLKVNPIANKNNQVYPGFSERFNSFNMRV 681
           ++H + L  +P+A   N   P  S RF + +MR+
Sbjct: 133 IMHEYRLAADPLAAAANTYKPSSSSRFRNVSMRL 166


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,419,288
Number of Sequences: 37544
Number of extensions: 306045
Number of successful extensions: 506
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 506
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2115411120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)