Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0380
         (785 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_34202| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.4  
SB_58390| Best HMM Match : DUF1167 (HMM E-Value=0)                     28   7.5  
SB_22450| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.9  

>SB_34202| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 717

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -1

Query: 785 KVLHAFTLKVNPIANKNNQVYPGFSER 705
           K LH++T + N + N     YPGF+ER
Sbjct: 601 KHLHSYTFESNILGNTGTGGYPGFAER 627


>SB_58390| Best HMM Match : DUF1167 (HMM E-Value=0)
          Length = 734

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 20/58 (34%), Positives = 33/58 (56%)
 Frame = +1

Query: 313 NDDLLCLEIFCNDPLFTKVTQNIFFKFTICRQNTSFVNNKRMHVYFIAKITTTFHFYF 486
           N  L   ++FCN P  +K+  NIF+KF  CR+ T  ++ KR     +++  ++ HF F
Sbjct: 225 NGTLYTADLFCNKP--SKL--NIFYKF--CRKRT--ISEKRK----VSRCQSSSHFVF 270


>SB_22450| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2806

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -3

Query: 696  IQYESILIKYVGNYLYHQWHNSSKAWSCF 610
            I Y+S     + NY   +WH SS AWS F
Sbjct: 2508 ITYDSYDCNQLSNYK-RRWHKSSIAWSSF 2535


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,687,368
Number of Sequences: 59808
Number of extensions: 410211
Number of successful extensions: 657
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 619
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 656
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2155861620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)