Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0380
         (785 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75536-4|CAA99832.3| 2271|Caenorhabditis elegans Hypothetical pr...    31   0.71 
Z75536-3|CAA99831.3| 2279|Caenorhabditis elegans Hypothetical pr...    31   0.71 
AF372457-1|AAK54248.1| 2279|Caenorhabditis elegans endocytosis p...    31   0.71 
Z78018-7|CAB01449.2| 2577|Caenorhabditis elegans Hypothetical pr...    31   1.2  
Z78013-10|CAB01427.2| 2577|Caenorhabditis elegans Hypothetical p...    31   1.2  
AY314773-1|AAQ84880.1| 2596|Caenorhabditis elegans flamingo-like...    31   1.2  
Z68107-2|CAE17826.1|  170|Caenorhabditis elegans Hypothetical pr...    29   5.0  
Z95559-8|CAB54437.1|  720|Caenorhabditis elegans Hypothetical pr...    28   8.7  
L16559-6|AAA27931.1|  397|Caenorhabditis elegans Hypothetical pr...    28   8.7  
AJ512486-1|CAD54736.1|  559|Caenorhabditis elegans core alpha-6-...    28   8.7  
AF022968-8|AAN84870.1|  559|Caenorhabditis elegans Fucosyl trans...    28   8.7  
AF016675-5|AAB66134.1|  476|Caenorhabditis elegans Hypothetical ...    28   8.7  

>Z75536-4|CAA99832.3| 2271|Caenorhabditis elegans Hypothetical
           protein F18C12.2b protein.
          Length = 2271

 Score = 31.5 bits (68), Expect = 0.71
 Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
 Frame = -1

Query: 218 C*TQLSHLVCLKRNLSQ*KEPCIFYK--DTRSYVIFRAQRDQVIASIV 81
           C T L H+VCL R+    ++  + Y+  D R+YV   A+RD ++AS++
Sbjct: 277 CATPLKHIVCLVRSEKDPQQFIVEYENGDGRAYV--AAERDLILASLL 322


>Z75536-3|CAA99831.3| 2279|Caenorhabditis elegans Hypothetical
           protein F18C12.2a protein.
          Length = 2279

 Score = 31.5 bits (68), Expect = 0.71
 Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
 Frame = -1

Query: 218 C*TQLSHLVCLKRNLSQ*KEPCIFYK--DTRSYVIFRAQRDQVIASIV 81
           C T L H+VCL R+    ++  + Y+  D R+YV   A+RD ++AS++
Sbjct: 277 CATPLKHIVCLVRSEKDPQQFIVEYENGDGRAYV--AAERDLILASLL 322


>AF372457-1|AAK54248.1| 2279|Caenorhabditis elegans endocytosis
           protein RME-8 protein.
          Length = 2279

 Score = 31.5 bits (68), Expect = 0.71
 Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
 Frame = -1

Query: 218 C*TQLSHLVCLKRNLSQ*KEPCIFYK--DTRSYVIFRAQRDQVIASIV 81
           C T L H+VCL R+    ++  + Y+  D R+YV   A+RD ++AS++
Sbjct: 277 CATPLKHIVCLVRSEKDPQQFIVEYENGDGRAYV--AAERDLILASLL 322


>Z78018-7|CAB01449.2| 2577|Caenorhabditis elegans Hypothetical protein
            F15B9.7 protein.
          Length = 2577

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
 Frame = +1

Query: 400  CRQNTSFVNNKRMHVY--FIAKITTTFHFYFCDCTLKYTVYFAH 525
            CRQ   FV   + H    FIA+   T + + C+C   +T   AH
Sbjct: 1202 CRQTQKFVGEMKAHETDNFIARTLNTVNTFVCECPSGFTSSGAH 1245


>Z78013-10|CAB01427.2| 2577|Caenorhabditis elegans Hypothetical
            protein F15B9.7 protein.
          Length = 2577

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
 Frame = +1

Query: 400  CRQNTSFVNNKRMHVY--FIAKITTTFHFYFCDCTLKYTVYFAH 525
            CRQ   FV   + H    FIA+   T + + C+C   +T   AH
Sbjct: 1202 CRQTQKFVGEMKAHETDNFIARTLNTVNTFVCECPSGFTSSGAH 1245


>AY314773-1|AAQ84880.1| 2596|Caenorhabditis elegans flamingo-like
            protein FMI-1 protein.
          Length = 2596

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
 Frame = +1

Query: 400  CRQNTSFVNNKRMHVY--FIAKITTTFHFYFCDCTLKYTVYFAH 525
            CRQ   FV   + H    FIA+   T + + C+C   +T   AH
Sbjct: 1202 CRQTQKFVGEMKAHETDNFIARTLNTVNTFVCECPSGFTSSGAH 1245


>Z68107-2|CAE17826.1|  170|Caenorhabditis elegans Hypothetical
           protein F48C5.2 protein.
          Length = 170

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = -3

Query: 495 AVTKIKMKGRCYLGNKIYMHTFIVNKRSVLSTNSKFKKDI 376
           A T   +K RCYL N I   T   +K S L  NS++ K +
Sbjct: 58  AYTYDTVKKRCYLKNAIGFSTEDFSKTSGLKPNSRYGKGV 97


>Z95559-8|CAB54437.1|  720|Caenorhabditis elegans Hypothetical
           protein Y41E3.16 protein.
          Length = 720

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = +1

Query: 379 IFFKFTICRQNTSFVNNKRMHVYFIAKITTTFHFYFCD-CTLKYTVY 516
           +++     +  TSF+ NK +    I   + T +F+F + C LK T Y
Sbjct: 607 VYYSILFRKHTTSFLKNKIIFSTRIVISSPTIYFFFSEFCLLKRTDY 653


>L16559-6|AAA27931.1|  397|Caenorhabditis elegans Hypothetical
           protein C06E1.8 protein.
          Length = 397

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
 Frame = +1

Query: 325 LCLEIFCNDPLFTKVTQNIFFKF---TICRQNTSFVNNKRMHVYFIAKITTTFHFYFCDC 495
           +C ++FC+    ++      FK    T+CR++ S   + R H++    I+     Y C C
Sbjct: 55  ICSKVFCHSSSLSRHRMQAHFKSYKCTVCRKDISSSESLRTHMFKQHHIS---RMYMCRC 111


>AJ512486-1|CAD54736.1|  559|Caenorhabditis elegans core
           alpha-6-fucosyltransferase protein.
          Length = 559

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -3

Query: 561 TRLVNVDKLINFVCKVHSIFQCAVT 487
           T + N+DK   F C++H +  CA+T
Sbjct: 193 TLVCNLDKECGFGCQLHHVTYCAIT 217


>AF022968-8|AAN84870.1|  559|Caenorhabditis elegans Fucosyl
           transferase protein 8 protein.
          Length = 559

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -3

Query: 561 TRLVNVDKLINFVCKVHSIFQCAVT 487
           T + N+DK   F C++H +  CA+T
Sbjct: 193 TLVCNLDKECGFGCQLHHVTYCAIT 217


>AF016675-5|AAB66134.1|  476|Caenorhabditis elegans Hypothetical
           protein T27B7.2 protein.
          Length = 476

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = -2

Query: 385 KRYFALLL*IKDHCKRFLDIKGHHFMIYEINR*IFLRKYFLLFRYTKL 242
           KR+   +L + DH ++ L    HH+   E+NR  +L++     +  KL
Sbjct: 342 KRFQGEILKVTDHFQQTLSNDLHHYYTSELNRERYLKRLTDFMKINKL 389


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,656,008
Number of Sequences: 27780
Number of extensions: 332712
Number of successful extensions: 628
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 615
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 628
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)