Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0379
         (784 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          25   0.79 
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      25   0.79 
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          25   0.79 
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    22   5.6  
AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex det...    22   7.4  
AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex det...    21   9.8  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    21   9.8  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 25.0 bits (52), Expect = 0.79
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -1

Query: 103 RYETLPKLKQIWSTSVR 53
           +Y+ +P   Q+WSTS+R
Sbjct: 397 KYQVVPSALQMWSTSLR 413


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 25.0 bits (52), Expect = 0.79
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -1

Query: 103 RYETLPKLKQIWSTSVR 53
           +Y+ +P   Q+WSTS+R
Sbjct: 397 KYQVVPSALQMWSTSLR 413


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 25.0 bits (52), Expect = 0.79
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -1

Query: 103 RYETLPKLKQIWSTSVR 53
           +Y+ +P   Q+WSTS+R
Sbjct: 23  KYQVVPSALQMWSTSLR 39


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = +1

Query: 439 KFDLDNNNFKCLRYNLQWNLGVRSL-LNIAEI 531
           K++ +NNN+    YN  +N   + L  NI  I
Sbjct: 330 KYNYNNNNYNNNNYNNNYNNNCKKLYYNIINI 361


>AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 454 NNNFKCLRYNLQW 492
           NNN+K L YN+ +
Sbjct: 328 NNNYKPLHYNINY 340


>AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +1

Query: 451 DNNNFKCLRYNLQW 492
           +NNN+K L YN+ +
Sbjct: 319 NNNNYKKLYYNINY 332


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -1

Query: 352 LTLSKVNNNLISSKSTIMKAINKSIEPF*K 263
           + LS V NNL  S  T       ++EPF K
Sbjct: 257 MALSPVTNNLYYSPLTSHSLYYVNMEPFMK 286


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,577
Number of Sequences: 438
Number of extensions: 3611
Number of successful extensions: 21
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24639531
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)