Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0378
         (782 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7S242 Cluster: Predicted protein; n=1; Nematostella ve...    34   3.5  
UniRef50_Q2JMI8 Cluster: Phosphate ABC transporter, permease pro...    33   6.1  
UniRef50_O26933 Cluster: Conserved protein; n=1; Methanothermoba...    33   6.1  

>UniRef50_A7S242 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 189

 Score = 34.3 bits (75), Expect = 3.5
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = +1

Query: 277 RCADVAMCGGRLCLFVARCALSLAFQALN 363
           +C  VAMC   LC+ VA CA+SL  Q ++
Sbjct: 142 QCVHVAMCAVSLCVHVAMCAVSLCVQCVH 170



 Score = 33.9 bits (74), Expect = 4.6
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = +1

Query: 280 CADVAMCGGRLCLFVARCALSLAFQALN 363
           C  VAMC   LC+ VA CA+SL  Q ++
Sbjct: 15  CVHVAMCAVSLCVHVAMCAVSLCVQCVH 42


>UniRef50_Q2JMI8 Cluster: Phosphate ABC transporter, permease
           protein PstC; n=2; Synechococcus|Rep: Phosphate ABC
           transporter, permease protein PstC - Synechococcus sp.
           (strain JA-2-3B'a(2-13)) (Cyanobacteria
           bacteriumYellowstone B-Prime)
          Length = 322

 Score = 33.5 bits (73), Expect = 6.1
 Identities = 25/81 (30%), Positives = 43/81 (53%)
 Frame = +3

Query: 309 IVPLCRSLRALACISSLKWNASMIHVFSCVQPAPSNYKSLSRQK*AHISNESFTQLVQTP 488
           ++ L R+L     ++ L  NA  I V S + PA SN  +L   + A  ++E  + L+   
Sbjct: 235 VLGLGRALGETMAVAMLIGNARGIRV-SLLAPA-SNIPALLASEFAEAADEQISALMYAA 292

Query: 489 LALMDISLIVNTLSSK*TRRI 551
           L L+ I+L+VN ++    RR+
Sbjct: 293 LILLVITLVVNIIAELLVRRV 313


>UniRef50_O26933 Cluster: Conserved protein; n=1;
           Methanothermobacter thermautotrophicus str. Delta H|Rep:
           Conserved protein - Methanobacterium thermoautotrophicum
          Length = 283

 Score = 33.5 bits (73), Expect = 6.1
 Identities = 16/59 (27%), Positives = 31/59 (52%)
 Frame = -3

Query: 330 TSDKEAQSASAHRHIGTSTIIPLILHVFVKYEVQ*KVSVVNCPYKIYIKQIKLNFSFEK 154
           TS     +++A+     ST +    H +V Y+V+ KVS +  PY++ +K+    + + K
Sbjct: 37  TSSTTGNTSAAYTKASASTTVNYTYHEYVPYKVRVKVSYLK-PYRVKVKKATRTYYYRK 94


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 696,308,788
Number of Sequences: 1657284
Number of extensions: 12927979
Number of successful extensions: 25866
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 25160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25861
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 66262109095
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)