Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0378
         (782 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0657 + 25938382-25938443,25938511-25938718,25939222-259392...    32   0.45 

>11_06_0657 +
           25938382-25938443,25938511-25938718,25939222-25939268,
           25939473-25939805,25940529-25940613,25940689-25940884,
           25941012-25941182,25941261-25941318,25941429-25941657,
           25942296-25943183
          Length = 758

 Score = 32.3 bits (70), Expect = 0.45
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +3

Query: 333 RALACISSLKWNASMIHVFSCVQPAPSNYKSLSRQK*AHISNESF 467
           + L  IS   W+  + H   C +P P+NY S + +   H  +ESF
Sbjct: 245 KILGNISDQDWDMIINHALKC-KPRPANYSSYTEEMNVHQEHESF 288


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,305,447
Number of Sequences: 37544
Number of extensions: 343450
Number of successful extensions: 716
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 716
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2103658836
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)