Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0378
         (782 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z74045-4|CAA98554.2|  924|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z74032-11|CAA98469.2|  924|Caenorhabditis elegans Hypothetical p...    30   1.6  
AF067609-5|AAC17534.1|  644|Caenorhabditis elegans Hypothetical ...    29   2.8  
Z81593-5|CAB04743.1|  332|Caenorhabditis elegans Hypothetical pr...    29   5.0  
AC024211-8|AAF36062.1|  832|Caenorhabditis elegans Hypothetical ...    28   6.6  

>Z74045-4|CAA98554.2|  924|Caenorhabditis elegans Hypothetical
           protein T27F2.2 protein.
          Length = 924

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 17/41 (41%), Positives = 24/41 (58%)
 Frame = +3

Query: 375 MIHVFSCVQPAPSNYKSLSRQK*AHISNESFTQLVQTPLAL 497
           M HV + +   PSN + LSR++  HI N+  T + Q P AL
Sbjct: 376 MFHVSTLLPFTPSNRQQLSRKR--HIGNDMVTIVFQEPGAL 414


>Z74032-11|CAA98469.2|  924|Caenorhabditis elegans Hypothetical
           protein T27F2.2 protein.
          Length = 924

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 17/41 (41%), Positives = 24/41 (58%)
 Frame = +3

Query: 375 MIHVFSCVQPAPSNYKSLSRQK*AHISNESFTQLVQTPLAL 497
           M HV + +   PSN + LSR++  HI N+  T + Q P AL
Sbjct: 376 MFHVSTLLPFTPSNRQQLSRKR--HIGNDMVTIVFQEPGAL 414


>AF067609-5|AAC17534.1|  644|Caenorhabditis elegans Hypothetical
           protein C23H5.7 protein.
          Length = 644

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = -2

Query: 124 TLSRSTIVSKPTLQTIDFFHFNKCLHFCFRLHKGLS 17
           T  R+  +    +  I  FH+N CL+F F L++G++
Sbjct: 168 TFPRAFKIILLAVSCIVLFHWNACLYFLFSLYEGIT 203


>Z81593-5|CAB04743.1|  332|Caenorhabditis elegans Hypothetical
           protein T20B3.5 protein.
          Length = 332

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +3

Query: 321 CRSLRALACISSLKWNASMIHVFSCV 398
           C  L+    + S+KW+   +HVFSC+
Sbjct: 39  CVLLKTPPTMQSVKWSMMNVHVFSCI 64


>AC024211-8|AAF36062.1|  832|Caenorhabditis elegans Hypothetical
           protein Y76B12C.1 protein.
          Length = 832

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 9/18 (50%), Positives = 15/18 (83%)
 Frame = -2

Query: 70  FHFNKCLHFCFRLHKGLS 17
           FH+N C++F F L++GL+
Sbjct: 375 FHWNACVYFLFSLYQGLT 392


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,654,010
Number of Sequences: 27780
Number of extensions: 331325
Number of successful extensions: 650
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 628
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 650
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)