Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0378
         (782 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    23   4.2  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    23   4.2  
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    23   4.2  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    22   7.4  
AB095514-1|BAC76336.1|   72|Apis mellifera ecdyson receptor prot...    21   9.8  

>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -3

Query: 597 YKSATYEANCLKTVSIFYVSI 535
           + SAT+  +  K VS+FY ++
Sbjct: 140 HPSATFSLDLNKVVSVFYTAV 160


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 10/31 (32%), Positives = 19/31 (61%), Gaps = 4/31 (12%)
 Frame = -3

Query: 615 NYKTIYY----KSATYEANCLKTVSIFYVSI 535
           +Y T+++     SAT+  +  K VS+FY ++
Sbjct: 129 SYGTLFFIYVQPSATFSLDLNKVVSVFYTAV 159


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 624 RLTRPKLWVSSPLQLLSCPPGDE 692
           R T+ ++W+    Q L C  GDE
Sbjct: 415 RQTQTEVWIPKWRQFLYCLAGDE 437


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -3

Query: 453 KYELIFDVTTTYNSMEPAARTKK 385
           K + IFD+ T  N+M  + R++K
Sbjct: 357 KLDKIFDIATKENAMLLSGRSQK 379


>AB095514-1|BAC76336.1|   72|Apis mellifera ecdyson receptor
           protein.
          Length = 72

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 9/31 (29%), Positives = 14/31 (45%)
 Frame = +2

Query: 437 KISSYFKRKLHSARSNSSGSDGYKPYCKHPK 529
           +I  Y +RK    R     + G +P C  P+
Sbjct: 27  EIDMYMRRKCQECRLKKCLTVGMRPECMVPE 57


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,424
Number of Sequences: 438
Number of extensions: 3740
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24639531
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)