Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0377
         (793 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   1.6  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    23   3.7  
DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    22   4.9  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   6.5  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 19/76 (25%), Positives = 30/76 (39%)
 Frame = -1

Query: 316 FMCLQLMYYFIKSFFPFKFQRFQIPKFNYVVLFLYEENCCYFNHYLLLQYINSYLQFLQI 137
           F+ L  +YYF  +F  F      +    Y V+ L+   C Y+ +   + +    L  L I
Sbjct: 107 FIILLCVYYFYYAFIIFTVHLLFLLCIYYFVVPLFFLLCIYYFYCAFIIFTVHLLFLLCI 166

Query: 136 L*FQSHFDFFFSKISF 89
             F   F  F   + F
Sbjct: 167 YHFFCAFIIFTMHLLF 182


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -2

Query: 558 LASAENFACTYKNTVRGINNI 496
           ++  E+ AC  KNTV   N+I
Sbjct: 179 VSKIESLACELKNTVDDFNDI 199


>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +2

Query: 503 LIPLTVFLYVHAKFSAE 553
           LIPL +FL+VH  +S +
Sbjct: 5   LIPLYLFLFVHYGWSED 21


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +3

Query: 546 QLRPSEPE*NKFT*RNFWIFPNYL 617
           Q +P  PE +  T R+ W+  N+L
Sbjct: 418 QNQPESPESSSSTPRHEWVAQNHL 441


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,701
Number of Sequences: 336
Number of extensions: 3519
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21480183
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)