Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0377
         (793 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92824-4|CAB07307.2|  395|Caenorhabditis elegans B0413.2 protein.      32   0.54 
Z81083-4|CAB03102.1|  645|Caenorhabditis elegans Hypothetical pr...    29   3.8  
U70849-11|AAK29800.1|  897|Caenorhabditis elegans Hypothetical p...    28   8.8  
U70849-10|AAK29799.1|  910|Caenorhabditis elegans Hypothetical p...    28   8.8  

>Z92824-4|CAB07307.2|  395|Caenorhabditis elegans B0413.2 protein.
          Length = 395

 Score = 31.9 bits (69), Expect = 0.54
 Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 3/96 (3%)
 Frame = -1

Query: 289 FIKSFFPFKFQ---RFQIPKFNYVVLFLYEENCCYFNHYLLLQYINSYLQFLQIL*FQSH 119
           F +SFFP +FQ   +F   K     LFL    C +       Q+     +FL +      
Sbjct: 31  FFESFFPLEFQVFTQFCFEKTKISXLFLNGXKCTF------RQFFTGIPRFLTLF----- 79

Query: 118 FDFFFSKISFPSLSIAE*YPIDSYFCRMYAMYPRAK 11
           FDF   K++F +    E + +    C+    +  +K
Sbjct: 80  FDFLIQKLNFSTFFFTEKFKVSLQICKFEXXHATSK 115


>Z81083-4|CAB03102.1|  645|Caenorhabditis elegans Hypothetical
           protein F44F1.5 protein.
          Length = 645

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 14/54 (25%), Positives = 27/54 (50%)
 Frame = -1

Query: 319 LFMCLQLMYYFIKSFFPFKFQRFQIPKFNYVVLFLYEENCCYFNHYLLLQYINS 158
           +F+  + +   ++SF  F       P  +++VLF Y E C +FN      ++N+
Sbjct: 595 IFLSNKCITSLLRSFSNFSLHT---PIHDFIVLFFYAEFCNFFNVLFCFTFLNT 645


>U70849-11|AAK29800.1|  897|Caenorhabditis elegans Hypothetical
           protein F29B9.2b protein.
          Length = 897

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
 Frame = +1

Query: 685 SLRFGKN--SIANKLLQLNVHHSERDLKKELRS 777
           SL FG N   + N  +Q+ V+H E  ++KE+RS
Sbjct: 575 SLVFGGNFLHLGNLEMQMRVYHLENAIRKEIRS 607


>U70849-10|AAK29799.1|  910|Caenorhabditis elegans Hypothetical
           protein F29B9.2a protein.
          Length = 910

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
 Frame = +1

Query: 685 SLRFGKN--SIANKLLQLNVHHSERDLKKELRS 777
           SL FG N   + N  +Q+ V+H E  ++KE+RS
Sbjct: 588 SLVFGGNFLHLGNLEMQMRVYHLENAIRKEIRS 620


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,965,402
Number of Sequences: 27780
Number of extensions: 302607
Number of successful extensions: 728
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 728
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)