Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0377
         (793 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    22   5.7  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    22   5.7  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    22   5.7  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    22   5.7  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   9.9  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   9.9  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    21   9.9  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    21   9.9  

>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -3

Query: 584 SEFVSFWLTW 555
           S F++FWL W
Sbjct: 317 SSFITFWLEW 326


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -3

Query: 584 SEFVSFWLTW 555
           S F++FWL W
Sbjct: 286 SSFITFWLEW 295


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -3

Query: 584 SEFVSFWLTW 555
           S F++FWL W
Sbjct: 337 SSFITFWLEW 346


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -3

Query: 584 SEFVSFWLTW 555
           S F++FWL W
Sbjct: 286 SSFITFWLEW 295


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +3

Query: 6   FGLALGYIAYMRQKYESMGYY 68
           + +A+G  A M++ Y ++ YY
Sbjct: 178 YNIAMGDTADMKKTYNNIDYY 198


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +3

Query: 6   FGLALGYIAYMRQKYESMGYY 68
           + +A+G  A M++ Y ++ YY
Sbjct: 178 YNIAMGDTADMKKTYNNIDYY 198


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = +1

Query: 559 VSQNETNSLNVTFGSFQTIYKSHHIKW 639
           +  +E N +  T      I+  HH+KW
Sbjct: 43  IDVDEKNQILTTNCWVTQIWTDHHLKW 69


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +3

Query: 45  KYESMGYYSAIDKDGKEIFEKKKS 116
           +++ M +Y +  +DGK   EKK++
Sbjct: 787 EFDEMSFYYSPVEDGKIYSEKKET 810


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,378
Number of Sequences: 438
Number of extensions: 3616
Number of successful extensions: 16
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25003662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)