Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0374
(767 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_38975| Best HMM Match : Serpin (HMM E-Value=0) 101 8e-22
SB_55237| Best HMM Match : Serpin (HMM E-Value=0) 85 6e-17
SB_55238| Best HMM Match : Serpin (HMM E-Value=0) 83 2e-16
SB_11238| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_27848| Best HMM Match : zf-C2H2 (HMM E-Value=1.49995e-41) 29 4.1
SB_5257| Best HMM Match : SlyX (HMM E-Value=2.2) 29 4.1
SB_27683| Best HMM Match : Exo_endo_phos (HMM E-Value=1.5e-20) 29 5.5
SB_24891| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_4415| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_49672| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_48263| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_29987| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
>SB_38975| Best HMM Match : Serpin (HMM E-Value=0)
Length = 380
Score = 101 bits (241), Expect = 8e-22
Identities = 50/175 (28%), Positives = 95/175 (54%), Gaps = 1/175 (0%)
Frame = +3
Query: 183 SAFSVLPPLAQLALASDGETHEELLKAIGFPDDDAIRTEFASKSRDLRSIKGVELKMANK 362
S S++ LA L + G T ++ K FP D + ++ + + G ++ MAN+
Sbjct: 33 SPASIVVALAMTYLGARGNTATQMTKTFHFPTDVPEKFHDFLQALNASNSDGNQILMANR 92
Query: 363 VYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAK-SINDWVEENTNNRIKDLVNPD 539
++ G ++ E F S++ F++++ +D+ KN+ A+ ++N WVE+ T ++IK+L+
Sbjct: 93 LFAQMGFEILEEFKKASKESFSAEMALVDYVKNSNGARDTVNRWVEQKTKDKIKNLIPEG 152
Query: 540 SLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYKY 704
+ T LVNA+YFKG+W F+ T F + + I+V MY+ +++Y
Sbjct: 153 MFNKDTILCLVNAVYFKGSWMKHFNRNATQSGKFKTTPSQEIQVQFMYQSSEFRY 207
>SB_55237| Best HMM Match : Serpin (HMM E-Value=0)
Length = 363
Score = 85.0 bits (201), Expect = 6e-17
Identities = 52/168 (30%), Positives = 88/168 (52%), Gaps = 7/168 (4%)
Frame = +3
Query: 207 LAQLALASDGETHEELLKAIGFPDDDAIRTEFASKSRD---LRSIKGV-ELKMANKVYVH 374
L + L S G T ++ G+ + + T K L S G E+++ NK++ H
Sbjct: 5 LGLVYLGSRGTTAIQIANIFGWKESEFEETHRTFKQFHEALLTSDLGYGEIQLVNKIWGH 64
Query: 375 DGGKLDENFAVVSRDVFNSDVQNIDF-SKNTVAAKSINDWVEENTNNRIKDLVNPDSLSS 551
D ++ E F +R+ ++S++ +DF +K A K +N WV + T IK+L+ ++S
Sbjct: 65 DEFEILEEFLHGTREFYHSEMAQVDFVNKAFDARKEVNAWVHQQTKGNIKELIPHGVINS 124
Query: 552 ATAAVLVNAIYFKGAWSSKFDERLTSDRDFYV--SKDKTIKVPMMYKR 689
T ++VNA+YFKG W +F E T F+V S + I+V MM ++
Sbjct: 125 LTRLIIVNAVYFKGVWKKEFGEENTFHAAFFVPESHESKIEVEMMTRK 172
>SB_55238| Best HMM Match : Serpin (HMM E-Value=0)
Length = 345
Score = 83.0 bits (196), Expect = 2e-16
Identities = 36/122 (29%), Positives = 66/122 (54%), Gaps = 1/122 (0%)
Frame = +3
Query: 342 ELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAA-KSINDWVEENTNNRI 518
E+ +AN +++ + + F + + +++D+ +D+ + A K +N WVEE T +I
Sbjct: 49 EMSIANNLFLQKDFSILKEFTDICQKYYDADISLVDYKTDFEGARKHVNQWVEERTKKKI 108
Query: 519 KDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKRGDY 698
DL+ P + T LVNAIYFKG W F + + +F + ++V MM+++ +
Sbjct: 109 CDLIAPGVFNMLTRLTLVNAIYFKGMWDKPFKKEHSHSSEFRTTSSNEVEVEMMFQKSKF 168
Query: 699 KY 704
KY
Sbjct: 169 KY 170
>SB_11238| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = -3
Query: 234 HQKLKLTEREEAAPKMPRGQRFXPGLFFTTSVNILAVKLSF 112
HQ L + E + ++PK PR +F GLF T +L V F
Sbjct: 50 HQNLSINEMDSSSPKRPRQHQF--GLFCTVFKPLLLVPSGF 88
>SB_27848| Best HMM Match : zf-C2H2 (HMM E-Value=1.49995e-41)
Length = 257
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 394 RILQSFPGTSSIRTSKTLISRRIQSQLS 477
R+ SFPG S TL++R QSQ+S
Sbjct: 65 RLYDSFPGASRSEAESTLLARMRQSQVS 92
>SB_5257| Best HMM Match : SlyX (HMM E-Value=2.2)
Length = 641
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = +3
Query: 384 KLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDW---VEENTNNRIKD 524
K +E+ + S +F+ + +N+DFS + ++ DW VE N ++D
Sbjct: 460 KFEEDLRISS--MFSGEGENVDFSTDLYPTGNVEDWLLEVENTMRNSLRD 507
>SB_27683| Best HMM Match : Exo_endo_phos (HMM E-Value=1.5e-20)
Length = 672
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -3
Query: 234 HQKLKLTEREEAAPKMPRGQRFXPGLFFT 148
HQ L + E + ++PK PR +F GLF T
Sbjct: 56 HQNLSINEMDSSSPKRPRQHQF--GLFCT 82
>SB_24891| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 345
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -3
Query: 234 HQKLKLTEREEAAPKMPRGQRFXPGLFFT 148
HQ L + E + ++PK PR +F GLF T
Sbjct: 21 HQNLSINEMDSSSPKRPRQHQF--GLFCT 47
>SB_4415| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 640
Score = 28.7 bits (61), Expect = 5.5
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -2
Query: 76 CHCRDGDSKQTNDCL 32
CHCRDG+S Q N+ +
Sbjct: 336 CHCRDGESVQVNNAM 350
>SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2248
Score = 28.7 bits (61), Expect = 5.5
Identities = 34/154 (22%), Positives = 65/154 (42%), Gaps = 2/154 (1%)
Frame = +3
Query: 213 QLALASDGETHEELLKAIGFPDDDAIRTEFASKSRDLRSIKGVELKMANKVYVHDGGKLD 392
Q+ +SD + L + F ++DA SK + ++++ K+Y +D
Sbjct: 703 QVTTSSDVNNALDELDEVQFSEEDARGIRGLSKDATFK----IKIEEKRKLYQISKAAVD 758
Query: 393 ENFAVVSRDVFNSDVQNIDFSKNTVA--AKSINDWVEENTNNRIKDLVNPDSLSSATAAV 566
+ D F ++ D S N+ + +++N+N+ + D +L A V
Sbjct: 759 GDTGSKMADRFLEQLER-DPSANSDGRGTDEPSGHLDKNSNSEVSDETLEKTLK---ANV 814
Query: 567 LVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIK 668
N KG++S D+ SD +S DK++K
Sbjct: 815 QDNIKVTKGSFSDSSDKSSGSDNTDKMSSDKSVK 848
>SB_49672| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -3
Query: 234 HQKLKLTEREEAAPKMPRGQRFXPGLFFTTSVNILAVKL 118
H+ L + ER+ ++PK PR +F FF T L V L
Sbjct: 21 HENLSINERDSSSPKRPRQHQFG---FFCTVFKPLPVLL 56
>SB_48263| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -3
Query: 234 HQKLKLTEREEAAPKMPRGQRFXPGLFFT 148
HQ L + E + ++PK PR +F GLF T
Sbjct: 21 HQNLSINEMDSSSPKRPRQHQF--GLFCT 47
>SB_29987| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 118
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -3
Query: 234 HQKLKLTEREEAAPKMPRGQRFXPGLFFT 148
HQ L + E + ++PK PR +F GLF T
Sbjct: 7 HQNLSINEMDSSSPKCPRQHQF--GLFCT 33
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,786,549
Number of Sequences: 59808
Number of extensions: 428479
Number of successful extensions: 1320
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1318
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2083999566
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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