Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0373
         (758 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    22   4.6  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    22   4.6  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    22   6.1  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    22   6.1  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    22   6.1  
DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    22   6.1  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    22   6.1  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   8.1  

>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -1

Query: 668 RMYIYTRLMRHGSWSHC 618
           RMYI T  +  G W  C
Sbjct: 161 RMYINTESVLDGDWKKC 177


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +1

Query: 196 TLALYTCKLRLW 231
           +L  YTC+L+LW
Sbjct: 49  SLKQYTCELKLW 60


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 11/43 (25%), Positives = 18/43 (41%)
 Frame = -1

Query: 467 HRSFLQKVFVSKS*LSQDRKMCNSRVCKHRCGDSVAHDRRAAV 339
           H   L  +F  +S         N    +++C   +A+DR A V
Sbjct: 94  HCERLYGIFADESKCDVFWNCWNGEASRYQCSPGLAYDREARV 136


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 11/43 (25%), Positives = 18/43 (41%)
 Frame = -1

Query: 467 HRSFLQKVFVSKS*LSQDRKMCNSRVCKHRCGDSVAHDRRAAV 339
           H   L  +F  +S         N    +++C   +A+DR A V
Sbjct: 94  HCERLYGIFADESKCDVFWNCWNGEASRYQCSPGLAYDREARV 136


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 108 SLVPLAQPPHHPA 146
           S  PL  PPH+PA
Sbjct: 14  STSPLLTPPHNPA 26


>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/37 (24%), Positives = 19/37 (51%)
 Frame = -1

Query: 425 LSQDRKMCNSRVCKHRCGDSVAHDRRAAVDVNTGLMR 315
           L + +++CN  V  ++C  S     + +V   TG ++
Sbjct: 43  LGRLQRICNGEVAVNKCEGSCKSQVQPSVITPTGFLK 79


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = +3

Query: 348 PAIVSHAITTPVLTHSAIAHFPVLTQSTLGHEHFLKK 458
           PAIV  A  +     SAI  +  L    LG E F +K
Sbjct: 408 PAIVELAEDSKWRVRSAIIEYMPLLAGQLGREFFDEK 444


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = +2

Query: 725 NIWCSFYLSW 754
           N WCS Y+ W
Sbjct: 486 NNWCSPYIGW 495


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,991
Number of Sequences: 336
Number of extensions: 2711
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)