Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0372
(697 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21757| Best HMM Match : Hormone_3 (HMM E-Value=3.9) 38 0.008
SB_56472| Best HMM Match : Transposase_5 (HMM E-Value=1.2) 38 0.010
SB_42850| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.010
SB_30859| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.010
SB_1045| Best HMM Match : Hormone_3 (HMM E-Value=3.9) 37 0.014
SB_49613| Best HMM Match : Transposase_5 (HMM E-Value=0.033) 37 0.018
SB_59204| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.024
SB_16626| Best HMM Match : DUF1257 (HMM E-Value=3.6) 33 0.22
SB_36553| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_23205| Best HMM Match : Helicase_C (HMM E-Value=3.9e-14) 29 2.7
SB_40167| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_12098| Best HMM Match : p450 (HMM E-Value=1.7e-06) 29 2.7
SB_3378| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_27584| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 29 4.8
SB_50401| Best HMM Match : Pkinase (HMM E-Value=1.7e-16) 28 6.3
SB_51831| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_5283| Best HMM Match : Ank (HMM E-Value=3.1e-09) 28 8.3
SB_21044| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 28 8.3
>SB_21757| Best HMM Match : Hormone_3 (HMM E-Value=3.9)
Length = 254
Score = 37.9 bits (84), Expect = 0.008
Identities = 23/55 (41%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Frame = +1
Query: 262 FQQDSAPAHRAKSTQDWLVAR-EIDFIRHEY---WPSSSPDLNPLD*KIWQHLEE 414
FQQD A H A T WL R E I W SPDLNP D +W L++
Sbjct: 51 FQQDGATPHTANGTIAWLRQRFEEKLISRRCDVEWAQHSPDLNPPDFYLWGFLKD 105
>SB_56472| Best HMM Match : Transposase_5 (HMM E-Value=1.2)
Length = 615
Score = 37.5 bits (83), Expect = 0.010
Identities = 23/55 (41%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Frame = +1
Query: 262 FQQDSAPAHRAKSTQDWLVAR-EIDFIRHEY---WPSSSPDLNPLD*KIWQHLEE 414
FQQD A H A T WL R E I W SPDLNP D +W L++
Sbjct: 275 FQQDGATPHTANGTIAWLRQRFEEKLISRRCDVEWAPHSPDLNPPDFYLWGFLKD 329
>SB_42850| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 474
Score = 37.5 bits (83), Expect = 0.010
Identities = 23/55 (41%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Frame = +1
Query: 262 FQQDSAPAHRAKSTQDWLVAR-EIDFIRHEY---WPSSSPDLNPLD*KIWQHLEE 414
FQQD A H A T WL R E I W SPDLNP D +W L++
Sbjct: 51 FQQDGATPHTANGTIAWLRQRFEEKLISRRCDVEWAPHSPDLNPPDFYLWGFLKD 105
>SB_30859| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 163
Score = 37.5 bits (83), Expect = 0.010
Identities = 23/55 (41%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Frame = +1
Query: 262 FQQDSAPAHRAKSTQDWLVAR-EIDFIRHEY---WPSSSPDLNPLD*KIWQHLEE 414
FQQD A H A T WL R E I W SPDLNP D +W L++
Sbjct: 51 FQQDGATPHTANGTIAWLRQRFEEKLISRRCDVEWAPHSPDLNPPDFYLWGFLKD 105
Score = 32.7 bits (71), Expect = 0.29
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +3
Query: 441 LESLKTSLIKAAADIDMDLVRAAIDDWPRRLKACIQNHGGHFE 569
+E LKT++ I + I ++ RR++ C+Q +GGH E
Sbjct: 115 IEKLKTAITAKINAIPKEECIKVIQNFARRVQVCLQRNGGHLE 157
>SB_1045| Best HMM Match : Hormone_3 (HMM E-Value=3.9)
Length = 153
Score = 37.1 bits (82), Expect = 0.014
Identities = 23/55 (41%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Frame = +1
Query: 262 FQQDSAPAHRAKSTQDWLVAR-EIDFIRHEY---WPSSSPDLNPLD*KIWQHLEE 414
FQQD A H A T WL R E I W SPDLNP D +W L++
Sbjct: 51 FQQDGATPHTANGTIAWLRQRFEEKLISRRCDVEWVPHSPDLNPPDFYLWGFLKD 105
>SB_49613| Best HMM Match : Transposase_5 (HMM E-Value=0.033)
Length = 999
Score = 36.7 bits (81), Expect = 0.018
Identities = 23/55 (41%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Frame = +1
Query: 262 FQQDSAPAHRAKSTQDWLVAR-EIDFIRHEY---WPSSSPDLNPLD*KIWQHLEE 414
FQQD A H A T WL R E I W SPDLNP D +W L++
Sbjct: 660 FQQDGATPHTANETIAWLRQRFEGRLISRRCDVEWAPHSPDLNPPDFYLWGFLKD 714
>SB_59204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 361
Score = 36.3 bits (80), Expect = 0.024
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +1
Query: 244 NNRHWVFQQDSAPAHRAKSTQDW 312
N R +F QD APAH AK++QDW
Sbjct: 162 NKRSMLFVQDGAPAHTAKASQDW 184
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +3
Query: 429 PHPN-LESLKTSLIKAAADIDMDLVRAAIDDWPRRLKACIQNHGGHFE*TLV 581
P P + SLK+ KA ++ + + P+RLK I+ GGH TL+
Sbjct: 216 PQPRTMTSLKSRFKKAWRNVSLSTLSELSHSMPQRLKNVIKAKGGHANYTLI 267
>SB_16626| Best HMM Match : DUF1257 (HMM E-Value=3.6)
Length = 267
Score = 33.1 bits (72), Expect = 0.22
Identities = 21/53 (39%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
Frame = +1
Query: 268 QDSAPAHRAKSTQDWLVAR-EIDFIRHEY---WPSSSPDLNPLD*KIWQHLEE 414
QD A H A T WL R E I W SPDLNP D +W L++
Sbjct: 1 QDGATPHTANGTIAWLRQRFEEKLISRRCDVEWAPHSPDLNPPDFYLWGFLKD 53
>SB_36553| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 684
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/50 (22%), Positives = 25/50 (50%)
Frame = +1
Query: 163 KGVKTNVVVYQNTVLMNLVEPVSHTMFNNRHWVFQQDSAPAHRAKSTQDW 312
+G + VY++ + MN ++PV+HT + ++ +P +T +
Sbjct: 564 RGALNSAAVYKDPITMNTIDPVTHTNSASSDVTYKNHGSPYDEVTATSTY 613
>SB_23205| Best HMM Match : Helicase_C (HMM E-Value=3.9e-14)
Length = 1197
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/84 (23%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Frame = +1
Query: 40 AHSSEEASNRIPRVQRGHFPSSLMVWLGVSYWGLTEVHFCEKGVKTNVV--VYQNTVLMN 213
+++SE + IP +QR + + +++ + L E HF + + N++ +YQ +L
Sbjct: 880 SYNSELLATTIPEIQRTNLANVVLLLKSLGVQNLLEFHFMDPPPQENILNSMYQLWILGA 939
Query: 214 LVEPVSHTMFNNRHWVFQQDSAPA 285
L S T + + S PA
Sbjct: 940 LDNTGSLTPLGRQMTIVSMLSVPA 963
>SB_40167| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1788
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/55 (27%), Positives = 22/55 (40%)
Frame = -1
Query: 427 FEHAFPPSVAISSNLTDSNLDWRRASIRAG*SRFHAPPASLVCSSLYELAPNLVG 263
F P SSN+ ++ W I S HA +C+S YE ++G
Sbjct: 436 FREKILPKALPSSNVKQFDVKWAENGIDPSESEEHAQYIEELCTSFYETLTGMIG 490
>SB_12098| Best HMM Match : p450 (HMM E-Value=1.7e-06)
Length = 403
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/57 (26%), Positives = 30/57 (52%)
Frame = +3
Query: 345 RILALLQSRFESVRLEDMATLGGKACSKPHPNLESLKTSLIKAAADIDMDLVRAAID 515
+++ALL + ESV +A + HP+ + +L+ + D+D++ R A+D
Sbjct: 191 KLVALLMKKRESVADVITKMTFDEAFNASHPSFDKFFKTLLYSMEDVDLNTQRVALD 247
>SB_3378| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 78
Score = 29.1 bits (62), Expect = 3.6
Identities = 10/50 (20%), Positives = 25/50 (50%)
Frame = +1
Query: 163 KGVKTNVVVYQNTVLMNLVEPVSHTMFNNRHWVFQQDSAPAHRAKSTQDW 312
+G + +Y++ + MN ++PV+HT + ++ +P +T +
Sbjct: 4 RGALKSAALYEDPITMNTIDPVTHTNSASSDVTYKNHGSPYDEVTATSTY 53
>SB_27584| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 7381
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 44 TVVKKRATVFRVSNEVIFHPRSWYGW 121
TVV K R + + F PR WYGW
Sbjct: 4278 TVVYKELPKLRTAVAMRFLPRRWYGW 4303
>SB_50401| Best HMM Match : Pkinase (HMM E-Value=1.7e-16)
Length = 535
Score = 28.3 bits (60), Expect = 6.3
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +3
Query: 186 CVSKYSPDEPCGTCFS 233
C K+SPDE C TC S
Sbjct: 237 CAVKHSPDEICATCIS 252
>SB_51831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1065
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -1
Query: 691 SGHKFCHMFNVK*LKQVYSLCTHSYTKMNLTNI 593
+GH C KQV C H Y K+N++N+
Sbjct: 564 NGHSMCSTST----KQVLKYCQHVYPKLNVSNV 592
>SB_5283| Best HMM Match : Ank (HMM E-Value=3.1e-09)
Length = 481
Score = 27.9 bits (59), Expect = 8.3
Identities = 20/68 (29%), Positives = 28/68 (41%)
Frame = +3
Query: 294 EEHTRLAGGA*NRLHPARILALLQSRFESVRLEDMATLGGKACSKPHPNLESLKTSLIKA 473
EEH N L LL+ E+ L+D+ TL GKA ++ NL ++
Sbjct: 351 EEHASSTDPELNALDMMDSSGLLRHLIEAGLLQDVTTLVGKARARDEANLRKVQIQAKDI 410
Query: 474 AADIDMDL 497
A I L
Sbjct: 411 EAQISTKL 418
>SB_21044| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 1507
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -2
Query: 81 DTRNTVARFFTTVCVHLMFVL 19
D + A FF TVCVH+ FVL
Sbjct: 985 DDADAYAAFFGTVCVHVGFVL 1005
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,319,211
Number of Sequences: 59808
Number of extensions: 505353
Number of successful extensions: 1761
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1754
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1817559367
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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