Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0372
         (697 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    25   0.91 
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    23   2.1  
AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter...    23   2.1  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    23   2.1  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    23   2.1  
DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channe...    23   3.7  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    22   6.4  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   8.5  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   8.5  

>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 24.6 bits (51), Expect = 0.91
 Identities = 13/59 (22%), Positives = 28/59 (47%)
 Frame = +1

Query: 46  SSEEASNRIPRVQRGHFPSSLMVWLGVSYWGLTEVHFCEKGVKTNVVVYQNTVLMNLVE 222
           SS E + R+    R HF +S   + G+  W L      ++ +++   +Y   ++  ++E
Sbjct: 231 SSSELATRLAEAVRIHFTASRDAFYGLPLWKLLPTCAYKQLIESEDAIY--NIISEIIE 287


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
 Frame = -1

Query: 532 NLRGQSSIAARTRSMSISAAALIK-DVLSDSKLG*GFEHAFPPSVAISSNLT 380
           N+R   S     R + I    L K DVL  +    GF+  +P +V + +N T
Sbjct: 84  NMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGT 135


>AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter
           transporter-1A protein.
          Length = 203

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -3

Query: 62  LASSLLCAYTLCLFCI 15
           LA +LL  + LC FCI
Sbjct: 176 LAGTLLLVWILCYFCI 191


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +3

Query: 498 VRAAIDDWPRRLK 536
           + AA+D+WPR L+
Sbjct: 400 ITAAVDEWPRLLR 412


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +3

Query: 498 VRAAIDDWPRRLK 536
           + AA+D+WPR L+
Sbjct: 453 ITAAVDEWPRLLR 465


>DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channel
           protein.
          Length = 489

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +1

Query: 214 LVEPVSHTMFNNRHWVF 264
           ++ PVS  +FN  +W+F
Sbjct: 470 IIFPVSFMLFNAIYWIF 486


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 6/16 (37%), Positives = 14/16 (87%)
 Frame = +1

Query: 106 LMVWLGVSYWGLTEVH 153
           L+++LG++  G+T++H
Sbjct: 6   LLMYLGITCQGVTDIH 21


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 10/41 (24%), Positives = 17/41 (41%)
 Frame = -3

Query: 386 SNGFKSGLEEGQYSCRMKSISRATSQSCVLFAL*AGAESCW 264
           S   KSG+        +  ++R T  +  L  +  G  +CW
Sbjct: 279 STSKKSGIVRSHQQSCINRVARETKTAGTLAVVVGGFVACW 319


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +3

Query: 618 YEWVHNE*TCFN 653
           YE+VH+E TC +
Sbjct: 476 YEYVHDEYTCMD 487


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,520
Number of Sequences: 438
Number of extensions: 5330
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21317625
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)