Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0370
         (774 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0706 + 23719392-23719641,23720337-23720383,23720988-237210...    33   0.33 
06_03_0804 + 24761974-24763196,24763674-24764019                       29   4.1  
12_02_0656 + 21601782-21601925,21602249-21602460,21602686-216028...    29   5.4  
12_02_0492 + 19668896-19669893,19670886-19670972,19671067-19671097     29   5.4  
04_04_1569 - 34486005-34486303,34486386-34486928,34487382-344877...    29   5.4  
04_01_0505 + 6599181-6599249,6599537-6599632,6599931-6599962,660...    28   7.2  
12_02_0403 - 18627246-18627557,18627904-18628836                       28   9.5  
04_01_0510 - 6672993-6672999,6673102-6673144,6673719-6673992,667...    28   9.5  

>06_03_0706 +
           23719392-23719641,23720337-23720383,23720988-23721060,
           23721323-23721540,23721868-23722170,23722322-23722399,
           23723064-23723549,23723875-23724312
          Length = 630

 Score = 32.7 bits (71), Expect = 0.33
 Identities = 17/67 (25%), Positives = 32/67 (47%)
 Frame = -3

Query: 706 PLSGWWCKXKSRAKDLADDIQHDGPTSLKSVTHSNINDCSHSAKHRATWHRIARASVSQD 527
           PL   W   K     +  +IQH+GP +  S  HS+IND   + +  +  +++     S +
Sbjct: 436 PLELRWTSAKRTTSSVVTNIQHNGPAT-DSHRHSSINDSGSAQQEISDANKVLAPPSSSN 494

Query: 526 PTDA*PR 506
             ++ P+
Sbjct: 495 AVESSPK 501


>06_03_0804 + 24761974-24763196,24763674-24764019
          Length = 522

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 15/57 (26%), Positives = 26/57 (45%)
 Frame = -3

Query: 730 GTSLVMRTPLSGWWCKXKSRAKDLADDIQHDGPTSLKSVTHSNINDCSHSAKHRATW 560
           G S  +R  L  W    ++  +D+    ++DG    + +    +NDC H  +H A W
Sbjct: 299 GVSPAVRAALEPWVRAGRATLQDVRAQAEYDGWYYNQFLV---VNDCLHRYRHAARW 352


>12_02_0656 +
           21601782-21601925,21602249-21602460,21602686-21602813,
           21602905-21602986,21603308-21603406,21603619-21604054,
           21604280-21604350,21604438-21604523,21604740-21604750
          Length = 422

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 6/53 (11%)
 Frame = -3

Query: 766 ILYYKLFCYVMSGTSLVMR------TPLSGWWCKXKSRAKDLADDIQHDGPTS 626
           ILY+  F +V  G S +++       P   WW +      D +D   HD  T+
Sbjct: 191 ILYFLCFSHVNQGNSYIVKIAIKDLVPAEAWWYRVAIIGVDPSDLANHDAKTA 243


>12_02_0492 + 19668896-19669893,19670886-19670972,19671067-19671097
          Length = 371

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 15/46 (32%), Positives = 20/46 (43%)
 Frame = -1

Query: 147 TVALKPSLSSAV*CTILCFPSASKKL*YPWTVPPSLVSWADFVSPV 10
           TVA+   LS     TI      S      W VP +   WA +V+P+
Sbjct: 112 TVAMALDLSDRTLPTIFAMDLPSSSCVLAWPVPAAAKIWAPYVAPI 157


>04_04_1569 -
           34486005-34486303,34486386-34486928,34487382-34487766,
           34488450-34488650,34488739-34488951,34489210-34489446
          Length = 625

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +1

Query: 556 DAMWHDVSQSESNHLCWSESQ 618
           +A+W  V   +S+HLCW  ++
Sbjct: 145 NALWVQVGDGDSDHLCWERAE 165


>04_01_0505 +
           6599181-6599249,6599537-6599632,6599931-6599962,
           6601191-6601428,6601852-6601905,6601923-6602130,
           6602353-6602590,6602788-6602962,6603074-6603442
          Length = 492

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = -2

Query: 737 YVGHITRNEDSIE-RLVVQGKVEGKRSRGRYPTRWTDLIKICDS 609
           Y GH++   D     ++V   V G+RS G Y +  +D  +  DS
Sbjct: 321 YCGHVSTKSDMFSFGVIVLEMVTGRRSNGMYASTKSDTYESADS 364


>12_02_0403 - 18627246-18627557,18627904-18628836
          Length = 414

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 14/60 (23%), Positives = 27/60 (45%)
 Frame = -2

Query: 563 MASHRESIGISGSD*CMTTTTLSRVYXXXXXXEVHNIVYIWLYALEGQTGRRVWVSWQSI 384
           M+  R  + ++  D C   T +             N + I ++ LEG+ G++ W  W++I
Sbjct: 271 MSRCRLPVSMAKEDACCQLTDVGGRLGVSIAIHQRNSICIEVWLLEGRGGKQKWSKWRTI 330


>04_01_0510 -
           6672993-6672999,6673102-6673144,6673719-6673992,
           6674092-6674266,6674414-6674633,6674873-6675083,
           6676258-6676338
          Length = 336

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = -2

Query: 737 YVGHITRNEDSIE-RLVVQGKVEGKRSRGRYPTRWTDLIKICDSL 606
           Y GH++   D     ++V   V G+R+ G Y +  TD  +  DS+
Sbjct: 180 YCGHVSTKSDMFSFGVIVLEMVTGRRNNGIYASTRTDSSECMDSI 224


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,131,470
Number of Sequences: 37544
Number of extensions: 467782
Number of successful extensions: 1121
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1085
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1121
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2068401984
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)