Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0369
(752 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 263 3e-69
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 260 3e-68
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 256 3e-67
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 254 2e-66
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 253 4e-66
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 251 1e-65
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 241 1e-62
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 238 1e-61
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 235 1e-60
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 233 3e-60
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 229 6e-59
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 214 2e-54
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 211 2e-53
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 210 4e-53
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 208 1e-52
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 204 1e-51
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 202 7e-51
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 199 5e-50
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 193 3e-48
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 189 6e-47
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 187 3e-46
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 184 2e-45
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 183 4e-45
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 183 4e-45
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 177 2e-43
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 176 4e-43
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 168 1e-40
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 164 2e-39
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 161 1e-38
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 159 7e-38
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 159 9e-38
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 157 3e-37
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 154 2e-36
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 147 3e-34
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 139 6e-32
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 133 4e-30
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 132 7e-30
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 131 2e-29
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 124 3e-27
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 123 5e-27
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 119 7e-26
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 119 9e-26
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 117 4e-25
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 116 6e-25
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 116 6e-25
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 115 1e-24
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 114 2e-24
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 114 2e-24
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 112 1e-23
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 111 2e-23
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 109 5e-23
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 109 5e-23
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 109 9e-23
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 106 5e-22
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 103 6e-21
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 103 6e-21
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 101 3e-20
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 100 4e-20
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 100 8e-20
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 97 3e-19
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 97 5e-19
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 95 2e-18
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 94 4e-18
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 93 7e-18
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 93 9e-18
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 91 3e-17
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 90 6e-17
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 90 6e-17
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 89 8e-17
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 89 1e-16
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 89 1e-16
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 88 2e-16
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 87 3e-16
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 87 4e-16
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 87 4e-16
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 87 6e-16
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 85 2e-15
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 84 3e-15
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 82 1e-14
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 82 2e-14
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 82 2e-14
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 82 2e-14
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 81 3e-14
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 80 5e-14
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 80 7e-14
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 79 1e-13
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 77 5e-13
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 77 5e-13
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 76 8e-13
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 74 4e-12
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 73 8e-12
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 71 3e-11
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 69 1e-10
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 63 8e-09
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 59 1e-07
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 58 2e-07
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 50 5e-05
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 48 2e-04
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 46 8e-04
UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6; Di... 46 0.001
UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1; Ha... 45 0.002
UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pach... 44 0.004
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 39 0.15
UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 37 0.46
UniRef50_Q2ABI9 Cluster: NADH-ubiquinone oxidoreductase chain 2;... 34 3.3
UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4; C... 34 4.3
UniRef50_Q35062 Cluster: CoxI intron2 ORF; n=2; Marchantia polym... 34 4.3
UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 33 5.7
UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7; Locu... 33 7.6
UniRef50_Q8II85 Cluster: Putative uncharacterized protein; n=2; ... 33 10.0
UniRef50_Q5ABE2 Cluster: Putative uncharacterized protein CLN3; ... 33 10.0
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 263 bits (645), Expect = 3e-69
Identities = 140/234 (59%), Positives = 148/234 (63%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXX 181
TNHKDIGTLY AELG PGSLIGDDQIYNTIVTAHA
Sbjct: 7 TNHKDIGTLYFIFGIWAGMVGTSLSLLIRAELGTPGSLIGDDQIYNTIVTAHAFIMIFFM 66
Query: 182 XXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVY 361
N LVPL+LGAPD+AFPR+NN+ F IVENGAGTG TVY
Sbjct: 67 VMPIMIGGFGNWLVPLMLGAPDMAFPRMNNMSFWLLPPSLTLLISSSIVENGAGTGWTVY 126
Query: 362 PPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVG 541
PPLSSNIAH G SVDLAIFSLHLAGISS SFDQ+PLFV AVG
Sbjct: 127 PPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFITTIINMRMNNLSFDQMPLFVWAVG 186
Query: 542 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 703
ITAF AGAIT+LLTDRNLNTSFFDPAGGGDPILYQHLF FFGHP++
Sbjct: 187 ITAFLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPKL 240
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 260 bits (637), Expect = 3e-68
Identities = 138/250 (55%), Positives = 154/250 (61%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXX 181
TNHKDIGTLY AELG PG+L+GDDQIYN IVTAHA
Sbjct: 11 TNHKDIGTLYLIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFM 70
Query: 182 XXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVY 361
N LVPL++GAPD+AFPR+NN+ F VE GAGTG TVY
Sbjct: 71 VMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLXPPSFLLLLASSTVEAGAGTGWTVY 130
Query: 362 PPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVG 541
PPL+ N+AH G SVDLAIFSLHLAGISS S Q PLFV +V
Sbjct: 131 PPLAGNLAHAGASVDLAIFSLHLAGISSILGAINFITTAINMKPPAISQYQTPLFVWSVL 190
Query: 542 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 721
ITA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILP
Sbjct: 191 ITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILP 250
Query: 722 GFGIISHIIS 751
GFG+ISH+++
Sbjct: 251 GFGMISHVVT 260
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 256 bits (628), Expect = 3e-67
Identities = 135/250 (54%), Positives = 151/250 (60%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXX 181
TNHKDIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 10 TNHKDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFM 69
Query: 182 XXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVY 361
N LVPL++GAPD+AFPR+NN+ F VE GAGTG TVY
Sbjct: 70 VMPILIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVY 129
Query: 362 PPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVG 541
PPL+ N+AH G SVDL IFSLHLAG+SS S Q PLFV AV
Sbjct: 130 PPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTTINMKPPTISQYQTPLFVWAVL 189
Query: 542 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 721
+TA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILP
Sbjct: 190 VTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILP 249
Query: 722 GFGIISHIIS 751
GFGIISH+++
Sbjct: 250 GFGIISHVVA 259
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 254 bits (622), Expect = 2e-66
Identities = 132/208 (63%), Positives = 140/208 (67%)
Frame = +2
Query: 92 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 271
ELG PGSLIGDDQIYNTIVTAHA N L+PL+LGAPD+AFPR+NN
Sbjct: 13 ELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMLGAPDMAFPRMNN 72
Query: 272 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXX 451
+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAGISS
Sbjct: 73 MSFWLLPPSLILLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSIL 132
Query: 452 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 631
SFDQ+PLF+ AVGITA AGAIT+LLTDRNLNTSF
Sbjct: 133 GAINFITTIINMRINKMSFDQMPLFIWAVGITALLLLLSLPVLAGAITMLLTDRNLNTSF 192
Query: 632 FDPAGGGDPILYQHLF*FFGHPEVYILI 715
FDPAGGGDPILYQHLF FFGHPEVYILI
Sbjct: 193 FDPAGGGDPILYQHLFWFFGHPEVYILI 220
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 253 bits (619), Expect = 4e-66
Identities = 132/250 (52%), Positives = 151/250 (60%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXX 181
TNHKDIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 10 TNHKDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFM 69
Query: 182 XXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVY 361
N LVPL++GAPD+AFPR+NN+ F VE GAGTG TVY
Sbjct: 70 VMPVMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVY 129
Query: 362 PPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVG 541
PPL+ N+AH G SVDL IFSLHLAG+SS + Q PLFV +V
Sbjct: 130 PPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAITQYQTPLFVWSVL 189
Query: 542 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 721
+TA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILP
Sbjct: 190 VTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILP 249
Query: 722 GFGIISHIIS 751
GFG+ISH+++
Sbjct: 250 GFGMISHVVT 259
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 251 bits (615), Expect = 1e-65
Identities = 132/250 (52%), Positives = 151/250 (60%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXX 181
TNHKDIGTLY AELG PG+L+G+D IYN IVTAHA
Sbjct: 10 TNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFM 69
Query: 182 XXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVY 361
N LVPL++GAPD+AFPR+NN+ F +VE GAGTG TVY
Sbjct: 70 VMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASAMVEAGAGTGWTVY 129
Query: 362 PPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVG 541
PPL+ N +H G SVDL IFSLHLAG+SS + Q PLFV +V
Sbjct: 130 PPLAGNYSHPGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVL 189
Query: 542 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 721
ITA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILP
Sbjct: 190 ITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILP 249
Query: 722 GFGIISHIIS 751
GFG+ISHI++
Sbjct: 250 GFGMISHIVT 259
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 241 bits (591), Expect = 1e-62
Identities = 127/252 (50%), Positives = 149/252 (59%), Gaps = 2/252 (0%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXX 175
TNHKDIGTLY EL PG I G+ Q+YN ++TAHA
Sbjct: 11 TNHKDIGTLYFIFGAIAGVMGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLMIF 70
Query: 176 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*T 355
N VP+++GAPD+AFPR+NNI F +VE G+GTG T
Sbjct: 71 FMVMPAMIGGFGNWFVPILIGAPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGSGTGWT 130
Query: 356 VYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 535
VYPPLS +H G +VDLAIFSLHL+G+SS + +LPLFV +
Sbjct: 131 VYPPLSGITSHSGGAVDLAIFSLHLSGVSSILGSINFITTIFNMRGPGMTMHRLPLFVWS 190
Query: 536 VGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 715
V +TAF AGAIT+LLTDRN NT+FFDPAGGGDPILYQHLF FFGHPEVYILI
Sbjct: 191 VLVTAFLLLLSLPVLAGAITMLLTDRNFNTTFFDPAGGGDPILYQHLFWFFGHPEVYILI 250
Query: 716 LPGFGIISHIIS 751
LPGFGIISHI+S
Sbjct: 251 LPGFGIISHIVS 262
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 238 bits (582), Expect = 1e-61
Identities = 128/252 (50%), Positives = 147/252 (58%), Gaps = 2/252 (0%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXX 175
TN KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 8 TNAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIF 67
Query: 176 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*T 355
N LVP+++GAPD+AFPR+NNI F VE GAGTG T
Sbjct: 68 FMVMPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWT 127
Query: 356 VYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 535
VYPPLS +H G SVDLAIFSLHL+GISS + +LPLFV A
Sbjct: 128 VYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWA 187
Query: 536 VGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 715
+ +TA AGAIT+LLTDRN NTSF+DPAGGGDPILYQHLF FFGHPEVYILI
Sbjct: 188 IFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLFWFFGHPEVYILI 247
Query: 716 LPGFGIISHIIS 751
+PGFG++SHI+S
Sbjct: 248 IPGFGMVSHIVS 259
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 235 bits (574), Expect = 1e-60
Identities = 124/252 (49%), Positives = 149/252 (59%), Gaps = 2/252 (0%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXX 175
TNHKDIGTLY EL P + L+G+ QIYN ++TAHA
Sbjct: 16 TNHKDIGTLYLIFGAFSGVLGGCMSMLIRMELAQPSNHLLLGNHQIYNVLITAHAFLMIF 75
Query: 176 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*T 355
N LVP+++G+PD+AFPR+NNI F +VE G GTG T
Sbjct: 76 FMVMPVMIGGFGNWLVPIMIGSPDMAFPRLNNISFWLLPPSLCLLLMSALVEVGVGTGWT 135
Query: 356 VYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 535
VYPPLSS +H G +VDLAIFSLH++G SS S ++PLFV +
Sbjct: 136 VYPPLSSIQSHSGGAVDLAIFSLHISGASSILGAVNFISTILNMRSPGQSMYRIPLFVWS 195
Query: 536 VGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 715
+ +TAF AGAIT+LLTDRN NTSFFD +GGGDPILYQHLF FFGHPEVYILI
Sbjct: 196 ILVTAFLLLLAVPVLAGAITMLLTDRNFNTSFFDASGGGDPILYQHLFWFFGHPEVYILI 255
Query: 716 LPGFGIISHIIS 751
LPGFG+ISHI+S
Sbjct: 256 LPGFGMISHIVS 267
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 233 bits (570), Expect = 3e-60
Identities = 127/219 (57%), Positives = 147/219 (67%)
Frame = -3
Query: 678 NKC*YKIGSPPPAGSKNDVFKFRSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKGN*SNDI 499
NKC + IGSPPPAGSK +VFKFRSV +IVIAPA TGS++N+K AV T TN G S I
Sbjct: 1 NKC-WSIGSPPPAGSKKEVFKFRSVKSIVIAPASTGSESNSKMAVSNTDQTNSGMRSMVI 59
Query: 498 LFNRXXXXXXXXXXXXXIDEIPAKCSEKIARSTDLPLCAILDESGG*TVHPVPAPFSTIL 319
+R I+E PAKC+EKI STD P CAI SGG TVHPVP P STI
Sbjct: 60 PADRMLITVVMKFTAPKIEETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTPLSTIP 119
Query: 318 LEINNIREGGRSQNLILFIRGNAISGAPSIRGTNQFPNPPXXXXXXXXXXXXKACAVTIV 139
L + ++EGG +QNL+LFIRGNA+SGAP++ GTNQFPNPP KA AVT+
Sbjct: 120 LNKSKVKEGGSNQNLMLFIRGNAMSGAPNMSGTNQFPNPPIMIGMTMKKIITKAWAVTMT 179
Query: 138 L*I*SSPINDPGFPNSARIKSLKDVPIIPDQIPKIKYNV 22
L I S PI PG PNSARIKSL DVP +P PK+KYNV
Sbjct: 180 L-IWSFPIKLPGCPNSARIKSLSDVPTMPAHAPKMKYNV 217
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 229 bits (560), Expect = 6e-59
Identities = 118/219 (53%), Positives = 138/219 (63%)
Frame = +2
Query: 92 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 271
ELG PGSLIG+DQIYN+IVT+HA N L+PL+LG+PD++FPR+NN
Sbjct: 24 ELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPLMLGSPDMSFPRMNN 83
Query: 272 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXX 451
+ F + G GTG TVYPPLS + H G SVDL IFSLHLAG SS
Sbjct: 84 MSFWLLIPSLLLLILSMFINVGVGTGWTVYPPLSLILGHGGMSVDLGIFSLHLAGASSIM 143
Query: 452 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 631
+ D++ LF +V ITA AGAIT+LLTDRN+NTSF
Sbjct: 144 GAVNFITTILNMRSNLFNMDKMSLFSWSVFITAILLLLSLPVLAGAITMLLTDRNMNTSF 203
Query: 632 FDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 748
FDP+GGGDPILYQHLF FFGHPEVYILILPGFGIISH+I
Sbjct: 204 FDPSGGGDPILYQHLFWFFGHPEVYILILPGFGIISHMI 242
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 214 bits (523), Expect = 2e-54
Identities = 118/252 (46%), Positives = 140/252 (55%), Gaps = 2/252 (0%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXX 175
TN KDI LY EL PGS L G+ Q++N +V HA
Sbjct: 9 TNAKDIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVLMIF 68
Query: 176 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*T 355
N L+PL++GA D AFPRINNI F +VE+GAGTG T
Sbjct: 69 FLVMPALIGGFGNYLLPLMIGATDTAFPRINNIAFWVLPMGLVCLVTSTLVESGAGTGWT 128
Query: 356 VYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 535
VYPPLSS AH G SVDLAIF+LHL ISS + +LPLFV +
Sbjct: 129 VYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWS 188
Query: 536 VGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 715
+ ITAF + IT+LL DRN NTSFF+ +GGGDPILY+HLF FFGHPEVYILI
Sbjct: 189 IFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGHPEVYILI 248
Query: 716 LPGFGIISHIIS 751
+PGFGIISH++S
Sbjct: 249 IPGFGIISHVVS 260
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 211 bits (515), Expect = 2e-53
Identities = 116/252 (46%), Positives = 139/252 (55%), Gaps = 2/252 (0%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXX 175
TN KDI +Y EL PGS L G+ Q++N +V HA
Sbjct: 9 TNAKDISIMYFMLALFSGMAGSAMSMIIRMELAAPGSQYLHGNSQLFNVLVVGHAVLMIF 68
Query: 176 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*T 355
N ++PL++GA D++FPRIN+I F +VE+GAGTG T
Sbjct: 69 FLAMPALIGGFGNYMLPLMIGATDMSFPRINSIGFWLLPMGLVCLVTSTLVESGAGTGWT 128
Query: 356 VYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 535
VYPPLSS AH G SVDLAIFSLHL ISS S ++PLFV A
Sbjct: 129 VYPPLSSIQAHSGPSVDLAIFSLHLTSISSLLGAINFIVTTLNMRTNGMSMHKMPLFVWA 188
Query: 536 VGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 715
+ ITAF + IT+LL DRN NTSFF+ AGGGDPI YQH F FFGHPEVYILI
Sbjct: 189 IFITAFLLLLSLPVLSAGITMLLMDRNFNTSFFEVAGGGDPIFYQHAFWFFGHPEVYILI 248
Query: 716 LPGFGIISHIIS 751
+PGFGI+SHI+S
Sbjct: 249 IPGFGIVSHIVS 260
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 210 bits (512), Expect = 4e-53
Identities = 118/251 (47%), Positives = 136/251 (54%), Gaps = 1/251 (0%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXX 178
+N KDIG LY EL PG I D+Q+YN+I+TAHA
Sbjct: 10 SNAKDIGVLYLIYALFAGLIGTAFSVLIRLELSGPGVQYIADNQLYNSIITAHAIIMIFF 69
Query: 179 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 358
N L+PL LG PD+ FPR+NNI + +ENG GTG T+
Sbjct: 70 MVMPALIGGFGNFLLPLGLGGPDMGFPRLNNISYLLLIPSIVLFLFAGGIENGVGTGWTL 129
Query: 359 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 538
YPPLS +H G SVDLAIF LHL+GISS +L LF AV
Sbjct: 130 YPPLSGIQSHSGPSVDLAIFGLHLSGISSLLGAMNFMTTTFNMRSPGIRLHKLILFAWAV 189
Query: 539 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 718
ITA AG IT++LTDRN NTSFF+ AGGGDPILYQHLF FFGHPEVYILI+
Sbjct: 190 VITAVLLLLSLPVLAGGITMVLTDRNFNTSFFEVAGGGDPILYQHLFWFFGHPEVYILII 249
Query: 719 PGFGIISHIIS 751
PGFGIIS IS
Sbjct: 250 PGFGIISTTIS 260
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 208 bits (507), Expect = 1e-52
Identities = 111/229 (48%), Positives = 130/229 (56%)
Frame = +2
Query: 5 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 184
NHKDIG+LY EL +PGS++GDD +YN IVTAHA
Sbjct: 12 NHKDIGSLYLVFGALSGAIGTAFSMLIRLELSSPGSMLGDDHLYNVIVTAHAFVMIFFLV 71
Query: 185 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 364
N VPL++GAPD+AFPR+NNI F +VE GAGTG TVYP
Sbjct: 72 MPTMIGGFGNWFVPLMIGAPDMAFPRLNNISFWLLPPALFLLLGSSLVEQGAGTGWTVYP 131
Query: 365 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 544
PL+S AH G SVD+AIFSLHLAG+SS + ++PLFV +V I
Sbjct: 132 PLASIQAHSGGSVDMAIFSLHLAGLSSILGAMNFITTVMNMRTPGMTMSRIPLFVWSVLI 191
Query: 545 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 691
TA AGAIT+LLTDR NT+FFDPAGGGDPILYQHLF FFG
Sbjct: 192 TAILLLLSLPVLAGAITMLLTDRYFNTTFFDPAGGGDPILYQHLFWFFG 240
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 204 bits (499), Expect = 1e-51
Identities = 112/252 (44%), Positives = 129/252 (51%), Gaps = 2/252 (0%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXX 175
TNHK IG LY EL PG L G+ YN I T H
Sbjct: 12 TNHKRIGILYLFFGVFNGFLAVLLSMLMRLELAFPGDQILFGEYHFYNMITTVHGVLMLF 71
Query: 176 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*T 355
N VP+++GAPD++FPR+NN F E G GTG T
Sbjct: 72 VVVMPILFGGFGNYFVPILIGAPDMSFPRLNNFSFWLLPGAILLAVLATYSEGGPGTGWT 131
Query: 356 VYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 535
VYPPLSS +H G SVDL IFS HL GI S LPLFV +
Sbjct: 132 VYPPLSSLQSHSGASVDLMIFSFHLVGIGSIVAAINFICTIFYYKNEAMFNKDLPLFVWS 191
Query: 536 VGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 715
V +T+F A AIT+LL DRN NTSF+DP GGGD +LYQHLF FFGHPEVYILI
Sbjct: 192 VAVTSFLVIVAIPVLAAAITLLLFDRNFNTSFYDPVGGGDVVLYQHLFWFFGHPEVYILI 251
Query: 716 LPGFGIISHIIS 751
LPGFG++SHII+
Sbjct: 252 LPGFGLVSHIIA 263
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 202 bits (493), Expect = 7e-51
Identities = 111/251 (44%), Positives = 135/251 (53%), Gaps = 1/251 (0%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXX 178
+N KDI LY EL PG I D+Q+YN+I+T+H
Sbjct: 36 SNAKDIAILYLIFALFSGLLGTAFSVLIRLELSGPGIQYIEDNQLYNSIITSHGVIMIFF 95
Query: 179 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 358
N L+P+++G PD+AFPR+NN+ + I+ENG GTG T+
Sbjct: 96 MVMPALIGGFGNFLLPILIGGPDMAFPRLNNVSYWLLIPSLFLFVFAAIIENGVGTGWTL 155
Query: 359 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 538
YPPLS +H VDL IF LHL+GISS +L LF AV
Sbjct: 156 YPPLSGIQSHSSMGVDLGIFGLHLSGISSLLGAINFIATLLNMRSPGIKLHKLALFGWAV 215
Query: 539 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 718
ITA A AIT+LLTDRNLNTSF++ AGGGD ILYQHLF FFGHPEVYILI+
Sbjct: 216 VITAVLLLLSLPVLAAAITMLLTDRNLNTSFYELAGGGDAILYQHLFWFFGHPEVYILII 275
Query: 719 PGFGIISHIIS 751
PGFGIIS +IS
Sbjct: 276 PGFGIISTVIS 286
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 199 bits (486), Expect = 5e-50
Identities = 105/196 (53%), Positives = 118/196 (60%)
Frame = +2
Query: 92 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 271
ELG PGS IG+DQ+YN +VTAHA N LVPL+LGAPD+AFPR+NN
Sbjct: 23 ELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPLMLGAPDMAFPRLNN 82
Query: 272 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXX 451
+ F VE+GAGTG TVYPPLS N AH G SVDLAIFSLHLAG+SS
Sbjct: 83 MSFWFLPPSLSLLLMSAAVESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHLAGVSSIL 142
Query: 452 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 631
+ + LFV +V ITA AGAIT+LLTDRN NTSF
Sbjct: 143 GAVNFITTVINMRWGAMKIELVSLFVWSVKITAILLLLSLPVLAGAITMLLTDRNFNTSF 202
Query: 632 FDPAGGGDPILYQHLF 679
FDPAGGGDPILYQHLF
Sbjct: 203 FDPAGGGDPILYQHLF 218
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 193 bits (471), Expect = 3e-48
Identities = 109/228 (47%), Positives = 124/228 (54%), Gaps = 2/228 (0%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXX 175
TN KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 8 TNAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIF 67
Query: 176 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*T 355
N LVP+++GAPD+AFPR+NNI F VE GAGTG T
Sbjct: 68 FMVMPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWT 127
Query: 356 VYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 535
VYPPLS +H G SVDLAIFSLHL+GISS + +LPLFV A
Sbjct: 128 VYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWA 187
Query: 536 VGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 679
+ +TA AGAIT+LLTDRN NTSF+DPAGGGDPILYQHLF
Sbjct: 188 IFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLF 235
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 189 bits (461), Expect = 6e-47
Identities = 112/255 (43%), Positives = 135/255 (52%), Gaps = 5/255 (1%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXX 178
TN KDIGTLY EL PG I ++Q+YN+I+TAHA
Sbjct: 38 TNAKDIGTLYLIFALFSGLLGTAFSVLIRLELSGPGVQFIANNQLYNSIITAHAILMIFF 97
Query: 179 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 358
N L+PL++G PD+AFPR+NNI F I+E G GTG T+
Sbjct: 98 MVMPALIGGFGNFLMPLMIGGPDMAFPRLNNISFWLLPPSLLLLVFSAIIEGGVGTGWTL 157
Query: 359 ----YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 526
YPPLS +H G SVDLAIF+LHL+G+SS +L LF
Sbjct: 158 LKDKYPPLSGLQSHSGPSVDLAIFALHLSGVSSLLGSINFITTVANMRTPGIKLHKLALF 217
Query: 527 V*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVY 706
A + IT++LTDRN NTSFF+ AGGGDPIL+QHLF FFGHPEVY
Sbjct: 218 GWATWSSRSRYFL-------GITMVLTDRNFNTSFFEVAGGGDPILFQHLFWFFGHPEVY 270
Query: 707 ILILPGFGIISHIIS 751
ILI+PGFGIIS IS
Sbjct: 271 ILIIPGFGIISTTIS 285
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 187 bits (455), Expect = 3e-46
Identities = 116/270 (42%), Positives = 139/270 (51%), Gaps = 20/270 (7%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-------SLIGD------DQIY-- 136
TNHKDIGTLY AEL PG + D DQ Y
Sbjct: 34 TNHKDIGTLYLIFAIIAGIIGGAISGLMRAELAEPGIQYLQTWARFSDGPSATLDQAYHL 93
Query: 137 -NTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXX 313
N ++TAH N VP+++GAPD+AFPR+NNI F
Sbjct: 94 WNVLITAHGLIMVFFMVMPAMIGGFGNWFVPIMIGAPDMAFPRMNNISFWLLIPAFALLL 153
Query: 314 XXXIVE----NGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXX 481
V NGAGTG TVY PLS++ G +VD+AI SLH+AG SS
Sbjct: 154 GSTFVPGGTGNGAGTGWTVYAPLSTS-GSAGPAVDMAILSLHIAGASSILGAINFITTIL 212
Query: 482 XXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPI 661
+ ++PLFV +V +TAF A AIT+LLTDRN T+F+D AGGGDP
Sbjct: 213 NMRAPGMTLHKMPLFVWSVLVTAFLLLLALPVLAAAITMLLTDRNFGTTFYDAAGGGDPE 272
Query: 662 LYQHLF*FFGHPEVYILILPGFGIISHIIS 751
LYQHLF FFGHPEVYI+ILPGFGIIS I+S
Sbjct: 273 LYQHLFWFFGHPEVYIMILPGFGIISQIVS 302
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 184 bits (448), Expect = 2e-45
Identities = 92/223 (41%), Positives = 127/223 (56%), Gaps = 2/223 (0%)
Frame = +2
Query: 89 AELGNPGSLIG--DDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 262
A LG L G D ++N ++T H N +PL++GAPD+AFPR
Sbjct: 143 ALLGTMDQLDGNPDGHLWNVLITGHGVLMMFFVVIPALFGGFGNYFMPLMIGAPDMAFPR 202
Query: 263 INNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 442
+NN+ + +++ GAG G T YPP+S+ R+VD AIF++H++G S
Sbjct: 203 LNNLSYWMYVAGTCLAFCSVMIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVSGAS 262
Query: 443 SXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLN 622
S + ++PLF +V +TA+ AGAIT+LLTDRN
Sbjct: 263 SILGSINFITTFLNMRAPGMTLHKVPLFAWSVFVTAWLLLLSLPVLAGAITMLLTDRNFG 322
Query: 623 TSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 751
T+FFDPAGGGDPIL+QH+F FFGHPEVYI+ILP FG+ISHI++
Sbjct: 323 TTFFDPAGGGDPILFQHIFWFFGHPEVYIVILPAFGVISHIVA 365
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 183 bits (446), Expect = 4e-45
Identities = 92/216 (42%), Positives = 126/216 (58%)
Frame = +2
Query: 101 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 280
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 281 XXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXX 460
+++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 121 VVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAI 180
Query: 461 XXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP 640
+ +LPLFV +V ITA A +T+LL DRN NTSFF
Sbjct: 181 NLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVV 240
Query: 641 AGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 748
+GGGDP+LY+H+F FFGHPEVYILI+P FG++S I+
Sbjct: 241 SGGGDPLLYEHIFWFFGHPEVYILIVPVFGVVSQIV 276
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 183 bits (446), Expect = 4e-45
Identities = 92/216 (42%), Positives = 126/216 (58%)
Frame = +2
Query: 101 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 280
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 281 XXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXX 460
+++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 121 VVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAI 180
Query: 461 XXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP 640
+ +LPLFV +V ITA A +T+LL DRN NTSFF
Sbjct: 181 NLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVV 240
Query: 641 AGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 748
+GGGDP+LY+H+F FFGHPEVYILI+P FG++S I+
Sbjct: 241 SGGGDPLLYEHIFWFFGHPEVYILIVPVFGVVSQIV 276
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 177 bits (431), Expect = 2e-43
Identities = 100/211 (47%), Positives = 113/211 (53%)
Frame = +2
Query: 8 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 187
HKDIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 1 HKDIGTLYLIFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVM 60
Query: 188 XXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPP 367
N L+PL++GAPD+AFPR+NN+ F +E GAGTG TVYPP
Sbjct: 61 PIMIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGIEAGAGTGWTVYPP 120
Query: 368 LSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGIT 547
L+ N+AH G SVDL IFSLHLAGISS S Q PLFV AV IT
Sbjct: 121 LAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIMNMKPPAISQYQTPLFVWAVLIT 180
Query: 548 AFXXXXXXXXXAGAITILLTDRNLNTSFFDP 640
A A IT+LLTDRNLNT+FFDP
Sbjct: 181 AVLLLLSLPVLAAGITMLLTDRNLNTTFFDP 211
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 176 bits (429), Expect = 4e-43
Identities = 103/241 (42%), Positives = 124/241 (51%), Gaps = 2/241 (0%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXX 175
TN KDI LY EL PGS L G+ Q++N +V HA
Sbjct: 9 TNAKDIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVLMIF 68
Query: 176 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*T 355
N L+PL++GA D AFPRINNI F +VE+GAGTG T
Sbjct: 69 FLVMPALIGGFGNYLLPLMIGATDTAFPRINNIAFWVLPMGLVCLVTSTLVESGAGTGWT 128
Query: 356 VYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 535
VYPPLSS AH G SVDLAIF+LHL ISS + +LPLFV +
Sbjct: 129 VYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWS 188
Query: 536 VGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 715
+ ITAF + IT+LL DRN NTSFF+ +GGGDPILY+HLF FFG I++
Sbjct: 189 IFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGQTVATIIM 248
Query: 716 L 718
L
Sbjct: 249 L 249
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 168 bits (409), Expect = 1e-40
Identities = 97/232 (41%), Positives = 119/232 (51%), Gaps = 2/232 (0%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXX 175
TN KDI LY EL PG L G++Q++N +V HA
Sbjct: 9 TNAKDIAVLYFLLALFSGMAGTAMSLIIRLELAAPGQQYLHGNNQLFNVLVVGHAILMIF 68
Query: 176 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*T 355
N ++PL++GA D AFPRINNI F +VE+GAGTG T
Sbjct: 69 FMVMPALIGGFGNYMLPLMIGATDTAFPRINNIGFWLLPMGLVCLVTSTLVESGAGTGWT 128
Query: 356 VYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 535
VYPPL+S AH G SVDLAIF+LH+ ISS + +LPLFV A
Sbjct: 129 VYPPLASIQAHSGPSVDLAIFALHMTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWA 188
Query: 536 VGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 691
+ ITA + +T+LL DRN NTSFF+ AGGGDPILY+HLF FFG
Sbjct: 189 ILITAVLLLLTLPVLSAGVTMLLLDRNFNTSFFEVAGGGDPILYEHLFWFFG 240
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 164 bits (398), Expect = 2e-39
Identities = 90/249 (36%), Positives = 124/249 (49%), Gaps = 1/249 (0%)
Frame = +2
Query: 5 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 184
NHKDIGT+Y EL +PG + +Y++I+T HA
Sbjct: 13 NHKDIGTIYLYMGLWSGVFGLSLSHCMRIELSHPGEWLQVGYMYHSIMTMHAFMMIFFFV 72
Query: 185 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 364
N +PL++ D++ PR+NN+ + G G G T+YP
Sbjct: 73 MPTSIGGLGNWFIPLMIKIKDLSMPRLNNLSVWLALGSLFLMCMAFLSSGGLGCGWTMYP 132
Query: 365 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQL-PLFV*AVG 541
PLS++ G +DLA+FSLH+AG+SS F L P+ + +
Sbjct: 133 PLSNSEFMDGLPIDLAVFSLHMAGMSSIAGSINFLVTIFNMRMGALFFMSLNPMLIWTLF 192
Query: 542 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 721
T+ A +T+LL DR+ +TSF+ P GGGDPIL+QHLF FFGHPEVYILILP
Sbjct: 193 GTSILLVTSVPVLAAGLTLLLLDRHFSTSFYYPEGGGDPILWQHLFWFFGHPEVYILILP 252
Query: 722 GFGIISHII 748
FG+ISHI+
Sbjct: 253 AFGVISHIL 261
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 161 bits (392), Expect = 1e-38
Identities = 96/241 (39%), Positives = 120/241 (49%), Gaps = 2/241 (0%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXX 175
TN KDI LY EL N GS L G+ Q +N ++TAHA
Sbjct: 14 TNAKDIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILMIF 73
Query: 176 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*T 355
N L+PL+LGA D+AF R+NNI F +VE GAGTG T
Sbjct: 74 FFVMPALVGGFGNYLMPLMLGASDMAFARLNNISFWLLVPSLILILTSALVEAGAGTGWT 133
Query: 356 VYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 535
VY PL+ +H G +VDLAIFSLHL+G SS ++ +PLF A
Sbjct: 134 VYFPLAGIQSHSGPAVDLAIFSLHLSGFSSLLGAINFITTFINMRTIGMKYENVPLFAWA 193
Query: 536 VGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 715
V TA A +T+ + DRN NTSFF+ AGGGD +LYQHLF ++ HPEV I+
Sbjct: 194 VLFTAILLLLSLPVLAAGLTMGIFDRNFNTSFFEYAGGGDAVLYQHLFYWWNHPEVKIIC 253
Query: 716 L 718
L
Sbjct: 254 L 254
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 159 bits (386), Expect = 7e-38
Identities = 89/250 (35%), Positives = 117/250 (46%), Gaps = 2/250 (0%)
Frame = +2
Query: 5 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXX 178
NHK IGT Y EL +PG G Q+YN+++T H
Sbjct: 20 NHKTIGTYYIVLGYWAGLGGSVLSMLIRFELSSPGGHLFFGSGQVYNSVLTMHGVLMIFF 79
Query: 179 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 358
N ++PL+LGAP++AFPR+N + F + G G+ T
Sbjct: 80 LVMPILIGGFGNWMLPLMLGAPEMAFPRVNALSFWFTFVALLMVYQSFFIGGGPGSSWTF 139
Query: 359 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 538
YPPLS S+D I LH GI S + DQ+ +FV
Sbjct: 140 YPPLSVE-GQPELSLDTMILGLHTVGIGSLLGAINFMVTTQNMRSTAVTLDQISMFVWTS 198
Query: 539 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 718
+T+F AG++ LL DRN NTSF+D GG+P+LYQHLF FFGHPEVY++IL
Sbjct: 199 YLTSFLLVLSVPVLAGSLLFLLLDRNFNTSFYDTKKGGNPLLYQHLFWFFGHPEVYVIIL 258
Query: 719 PGFGIISHII 748
P FGIIS +
Sbjct: 259 PVFGIISEAV 268
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 159 bits (385), Expect = 9e-38
Identities = 87/156 (55%), Positives = 96/156 (61%)
Frame = +2
Query: 227 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 406
L LGAPD FPR N+ F VE GAGTG TV PPLS+NIAH G SVD
Sbjct: 4 LXLGAPDXXFPRXINMSFWFLPPXLSFFLXSSXVEKGAGTGWTVSPPLSANIAHEGSSVD 63
Query: 407 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 586
LAIFSLH+AG+ S + ++PLFV AV ITA AG
Sbjct: 64 LAIFSLHMAGVXSILGAINFISTVLNMRPSGMTPXRMPLFVWAVEITAILLLLSLPVLAG 123
Query: 587 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 694
AIT+LLTDRN+NTSFFDPAGGGDPILYQHLF F GH
Sbjct: 124 AITMLLTDRNINTSFFDPAGGGDPILYQHLFWFXGH 159
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 157 bits (381), Expect = 3e-37
Identities = 82/214 (38%), Positives = 108/214 (50%)
Frame = +2
Query: 107 GSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXX 286
G L GD Q YN ++T+H N +P++ G PD+ FPR+NN+ F
Sbjct: 48 GILFGDYQFYNVLITSHGLIMVFAFIMPVMMGGLVNYFIPVMAGFPDMVFPRLNNMSFWM 107
Query: 287 XXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXX 466
+ E G G G T+YP L H + D +F++HL GISS
Sbjct: 108 YLAGFGCVVNGFLTEEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHLLGISSILNSINL 167
Query: 467 XXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAG 646
SF LF+ A ITA AG +T++L DRN NTSF+D G
Sbjct: 168 LGTLFCCRRKFFSFLSWSLFIWAALITAILLIITLPVLAGGVTLILCDRNFNTSFYDVVG 227
Query: 647 GGDPILYQHLF*FFGHPEVYILILPGFGIISHII 748
GGD IL+QH+F FFGHPEVYI++LP FG+IS I+
Sbjct: 228 GGDLILFQHIFWFFGHPEVYIILLPVFGLISTIV 261
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 154 bits (374), Expect = 2e-36
Identities = 82/208 (39%), Positives = 115/208 (55%), Gaps = 2/208 (0%)
Frame = +2
Query: 101 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 280
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 281 XXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXX 460
+++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 121 VVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAI 180
Query: 461 XXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP 640
+ +LPLFV +V ITA A +T+LL DRN NTSFF
Sbjct: 181 NLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVV 240
Query: 641 AGGGDPILYQHLF*FFGH--PEVYILIL 718
+GGGDP+LY+H+F FFG P + I+I+
Sbjct: 241 SGGGDPLLYEHIFWFFGQIWPIIIIIII 268
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 147 bits (356), Expect = 3e-34
Identities = 83/211 (39%), Positives = 115/211 (54%)
Frame = +2
Query: 101 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 280
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 281 XXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXX 460
+++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 121 VVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAI 180
Query: 461 XXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP 640
+ +LPLFV +V ITA A +T+LL DRN NTSFF
Sbjct: 181 NLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVV 240
Query: 641 AGGGDPILYQHLF*FFGHPEVYILILPGFGI 733
+GGGDP+LY+H+ F+ +P V ILI GI
Sbjct: 241 SGGGDPLLYEHI--FYKNP-VLILIWLTSGI 268
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 139 bits (337), Expect = 6e-32
Identities = 84/253 (33%), Positives = 118/253 (46%), Gaps = 4/253 (1%)
Frame = +2
Query: 5 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQI--YNTIVTAHAXXXXX 175
NHK +G Y EL + +I + + YN I T H
Sbjct: 13 NHKTLGLYYLWFSFLFGSYGFLLSVILRTELYSSSLRIIAQENVNLYNMIFTIHGIIMIF 72
Query: 176 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*T 355
N +P++ G+P++A+PRIN+I E G GTG T
Sbjct: 73 FNIMPGLFGGFGNYFLPILCGSPELAYPRINSISLLLQPIAFVLVILSTAAEFGGGTGWT 132
Query: 356 VYPPLSSNIAHRGR-SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 532
+YPPLS+++ +VD+ IF L ++G++S + L +
Sbjct: 133 LYPPLSTSLMSLSPVAVDVIIFGLLVSGVASIMSSLNFITTVMHLRAKGLTLGILSVSTW 192
Query: 533 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 712
++ IT+ G + +LL+D + NT FFDP GDPILYQHLF FFGHPEVYIL
Sbjct: 193 SLIITSGMLLLTLPVLTGGVLMLLSDLHFNTLFFDPTFAGDPILYQHLFWFFGHPEVYIL 252
Query: 713 ILPGFGIISHIIS 751
ILP FG+ISH+IS
Sbjct: 253 ILPAFGVISHVIS 265
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 133 bits (322), Expect = 4e-30
Identities = 87/247 (35%), Positives = 110/247 (44%)
Frame = +2
Query: 5 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 184
+HK IG LY L +P + +YN +VT H
Sbjct: 109 DHKRIGLLYFVFGLWGGFIGLGLSLLIRLNLCDPYYNLVSVDVYNYLVTNHGVAMIFFFL 168
Query: 185 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 364
N +P+ L D+ PR+N++ G G G T+YP
Sbjct: 169 MPILIGGFGNYFLPIFLCLDDLLLPRLNSLSLWLMVPSIFYMELSLYY--GCGIGWTLYP 226
Query: 365 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 544
PLS G VD +FSLHLAG+SS S + V A
Sbjct: 227 PLSI-WEGSGFGVDYLMFSLHLAGVSSLIGSVNFISTIFSRLSFNCS-----IIVWAYLF 280
Query: 545 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPG 724
T+ A IT+LL DRN T+FF+P+GGGDPIL+QHLF FFGHPEVY+LILPG
Sbjct: 281 TSVLLLLSLPVLASGITMLLFDRNFGTAFFEPSGGGDPILFQHLFWFFGHPEVYVLILPG 340
Query: 725 FGIISHI 745
FGI+SHI
Sbjct: 341 FGIVSHI 347
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 132 bits (320), Expect = 7e-30
Identities = 82/252 (32%), Positives = 115/252 (45%), Gaps = 3/252 (1%)
Frame = +2
Query: 5 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDD--QIYNTIVTAHAXXXXX 175
NHK IG Y EL G +I D +IYN + T H
Sbjct: 16 NHKIIGISYLWLAYWFGMIGFYMSVLIRTELSMSGLKIITMDTLEIYNLLFTLHGLIMVF 75
Query: 176 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*T 355
N L P++LG D+ +PR+N +E G+GTG T
Sbjct: 76 FNIMTGLFGGIGNYLYPVLLGYCDVVYPRVNLYSLLFQPIGFVLVVSSIYLEIGSGTGWT 135
Query: 356 VYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 535
+YPPLS+++++ G +D IF L AGI+S D++ +
Sbjct: 136 LYPPLSTSLSNVG--IDFIIFGLLAAGIASTLSSVNFITTFTSVKTIGFVIDRISPAAWS 193
Query: 536 VGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 715
+ +T+F ++ DR+ NT FF+ + GDP+LYQHLF FFGHPEVYI+I
Sbjct: 194 IVLTSFLLLLSLPVVTAVFLMVFLDRHYNTMFFESSNSGDPVLYQHLFWFFGHPEVYIMI 253
Query: 716 LPGFGIISHIIS 751
LPGFGIIS ++S
Sbjct: 254 LPGFGIISLLLS 265
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 131 bits (317), Expect = 2e-29
Identities = 81/197 (41%), Positives = 94/197 (47%), Gaps = 2/197 (1%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXX 175
TN KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 8 TNAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIF 67
Query: 176 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*T 355
N LVP+++GAPD+AFPR+NNI F VE GAGTG T
Sbjct: 68 FMVMPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWT 127
Query: 356 VYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 535
VYPPLS +H G SVDLAIFSLHL+GISS + +LPLFV A
Sbjct: 128 VYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWA 187
Query: 536 VGITAFXXXXXXXXXAG 586
+ +TA AG
Sbjct: 188 IFVTAILLLLSLPVLAG 204
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 124 bits (298), Expect = 3e-27
Identities = 90/256 (35%), Positives = 118/256 (46%), Gaps = 8/256 (3%)
Frame = +2
Query: 5 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 184
+HKDIG LY EL +PG + + YN+++T+H
Sbjct: 93 DHKDIGLLYGAFGLTAFAVGGLMVVLMRIELADPGMTVISNTFYNSLLTSHGITMLFLFA 152
Query: 185 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXX--IVEN-GAGTG*T 355
N L+PL++GA D+AFPRIN I F I E A TG T
Sbjct: 153 TPIIAAFS-NYLIPLLIGADDMAFPRINAIAFWLLPPAALLIWAGFFPIPEVIPAQTGWT 211
Query: 356 VYPPLS-----SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLP 520
+Y PLS N A+ G VDL + LHL+G+S+ S+ L
Sbjct: 212 MYTPLSVGEGMGNQANAG--VDLMLLGLHLSGVSATMGSINFIATIFTERGKNVSWANLD 269
Query: 521 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 700
+F + + AI +LL DRN TSFF AG G IL+QHLF FFGHPE
Sbjct: 270 IFSWTILTQSGLILFAFPLLGSAIMMLLFDRNFGTSFF--AGEGGAILWQHLFWFFGHPE 327
Query: 701 VYILILPGFGIISHII 748
VYI++LP GIIS+I+
Sbjct: 328 VYIIVLPPMGIISYIL 343
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 123 bits (296), Expect = 5e-27
Identities = 82/248 (33%), Positives = 110/248 (44%)
Frame = +2
Query: 5 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 184
NH D+ LY +L P L D +YN VT H
Sbjct: 8 NHIDVSLLYFSLGIFSALLGMSFSLLFRLQLAFPSILTSD--VYNAFVTLHGLVMVFFAA 65
Query: 185 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 364
N L+P PD+ FPR+N + F ++ + A G T YP
Sbjct: 66 MPTAIGFFANLLIPYHCNLPDLLFPRMNALSFWLMPFSLSL-----LLFSMASAGWTFYP 120
Query: 365 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 544
PLSS SV+ ++FSLHLAGI+S + L LF ++ +
Sbjct: 121 PLSS----LSPSVEFSVFSLHLAGIASLISSCNFLVTMLATRTSL--WYSLSLFCWSIVL 174
Query: 545 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPG 724
+ A IT++LTD++L T F+D GGDP+LYQHLF FFGHPEVY++ILP
Sbjct: 175 VSLLLVLSLPVLAVGITLILTDKHLGTCFYDATMGGDPLLYQHLFWFFGHPEVYVVILPV 234
Query: 725 FGIISHII 748
FG+ S I
Sbjct: 235 FGLFSSSI 242
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 119 bits (287), Expect = 7e-26
Identities = 76/248 (30%), Positives = 105/248 (42%)
Frame = +2
Query: 5 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 184
+HK IG +Y +L P + +++N + T H
Sbjct: 31 DHKRIGIMYILTAVFYLAVGGFEALLMRIQLAFPNNTFLSPEMFNQLFTMHGTTMVFLVG 90
Query: 185 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 364
N VPL++GA D+AFPR+N+ F + + G Y
Sbjct: 91 MPVLTGFA-NYFVPLMIGARDVAFPRLNSFGFWMFFFGAALLHFSFLTGSAPNAGWFSYV 149
Query: 365 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 544
PLSS + VD I L + GI S S ++PLFV + +
Sbjct: 150 PLSSKAYSSLQGVDYWIIGLLIMGIGSVSGAINIFATIINLRAPGMSLQRVPLFVWMMLM 209
Query: 545 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPG 724
A A+ +LL DR L ++FFDP GG +L+QH F FGHPEVYILILPG
Sbjct: 210 QAILIILALPALNSALAMLLIDRWLGSAFFDPTRGGSAVLWQHYFWIFGHPEVYILILPG 269
Query: 725 FGIISHII 748
FG+IS +I
Sbjct: 270 FGMISEVI 277
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 119 bits (286), Expect = 9e-26
Identities = 77/256 (30%), Positives = 117/256 (45%), Gaps = 6/256 (2%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI----GDDQIYNTIVTAHAXXX 169
T+HK IG LY EL G I + IYN +T H
Sbjct: 16 TSHKIIGILYGYMGYIAGILGYIISMLIRMELNTQGLAIVRKVKEVTIYNNWITIHGLIM 75
Query: 170 XXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV-ENGAGT 346
N L+P+++G +++ PR+N I F ++ +
Sbjct: 76 LFVFIMPVGIGFYGNYLIPMLIGTSELSMPRMNGISFWMLIVGVVIFVISNVLMSKPISS 135
Query: 347 G*TVYPPLSSNIAHR-GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPL 523
G T+YPPLS+ A G ++DL++ +H+ GISS +F + +
Sbjct: 136 GWTLYPPLSTRDADNIGVNIDLSLLVVHVLGISSTIGSVNYITTNKYNRHVGLTFMNINI 195
Query: 524 FV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 703
+ ++ +T+ AIT LL DRN+N++ +D G DP+LYQHLF FFGHPEV
Sbjct: 196 YNFSIIVTSILLIGSLPILGVAITGLLLDRNINSTIYDVIG--DPVLYQHLFWFFGHPEV 253
Query: 704 YILILPGFGIISHIIS 751
Y++ILP FG+ S I++
Sbjct: 254 YVIILPVFGLTSLILT 269
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 117 bits (281), Expect = 4e-25
Identities = 70/212 (33%), Positives = 96/212 (45%), Gaps = 6/212 (2%)
Frame = +2
Query: 134 YNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXX 313
Y I T H N L+PL++GA D+AFPR+N F
Sbjct: 86 YQQIFTTHGLVMIFFAVTPVLIGTFGNLLIPLMIGARDMAFPRLNMYSFWTFLLSQLLVL 145
Query: 314 XXXIVENG-AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXX 490
G AG G T Y PLS+N+ G L + ++ + G+SS
Sbjct: 146 ASFFAPLGSAGAGWTTYTPLSTNVGMPGMGQTLVVAAIFVTGVSSTMGAVNYITTVIRLR 205
Query: 491 XXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPA-----GGGD 655
++ +LPL + + +TA A +LL DR+ T FF GGGD
Sbjct: 206 APGMTYMRLPLTIWGLWLTAILNALFVPVLGSAALLLLLDRSFGTEFFVAGASAVRGGGD 265
Query: 656 PILYQHLF*FFGHPEVYILILPGFGIISHIIS 751
PIL+QHLF FGHPEVYI+ILP +GI+ ++S
Sbjct: 266 PILWQHLFWIFGHPEVYIMILPAWGILGDVLS 297
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 116 bits (279), Expect = 6e-25
Identities = 75/250 (30%), Positives = 108/250 (43%), Gaps = 1/250 (0%)
Frame = +2
Query: 5 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 184
+HK IG ++ EL PG I D YN T H
Sbjct: 41 DHKRIGLMFLFWVLLFFLVGGIFALLIRVELLTPGPTIMDAMTYNRTFTLHGLVMIFLFM 100
Query: 185 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 364
N ++PL+LGA D+AFPR+N + ++ G TG T Y
Sbjct: 101 IPAIPAVFGNFMLPLMLGAKDVAFPRLNLLSLYIYLAGAVLALWG-MLNGGLDTGWTFYT 159
Query: 365 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 544
P S AH +V +F + G SS ++ ++PLFV A+
Sbjct: 160 PYS---AHTTTTVAPVLFGAFIIGFSSIVTGINFIVTCHTMRAPGITWFKMPLFVWAIYA 216
Query: 545 TAFXXXXXXXXXAGAITILLTDRNL-NTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 721
T+ G + +L+T NL FDPA GGDP+L+QHLF F+ HP VYI++LP
Sbjct: 217 TS-CIQVLATPVIGLLLVLVTVENLFGFGMFDPARGGDPVLFQHLFWFYSHPAVYIMVLP 275
Query: 722 GFGIISHIIS 751
FG++S +++
Sbjct: 276 SFGVMSEVVA 285
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 116 bits (279), Expect = 6e-25
Identities = 79/248 (31%), Positives = 103/248 (41%)
Frame = +2
Query: 5 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 184
+HK IG Y EL P ++YN ++T H
Sbjct: 26 DHKVIGIQYLVTSFLFFFIGGSFAEAMRTELATPSPDFVQPEMYNQLMTLHGTIMIFLWI 85
Query: 185 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 364
N L+PL++G D+AFPR+N + F V G T YP
Sbjct: 86 VPAGAAFA-NYLIPLMVGTEDMAFPRLNAVAFWLTPPGGILLISSFFV-GAPQAGWTSYP 143
Query: 365 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 544
PLS G +L I SL L G SS +PLF A+
Sbjct: 144 PLSLLSGKWGE--ELWILSLLLVGTSSILGAINFVTTILKMRIKDMDLHSMPLFCWAMLA 201
Query: 545 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPG 724
T+ A A+ +L D TSFF+P GGGDP++YQHLF F+ HP VYI+ILP
Sbjct: 202 TSSLILLSTPVLASALILLSFDLIAGTSFFNPVGGGDPVVYQHLFWFYSHPAVYIMILPF 261
Query: 725 FGIISHII 748
FG+IS +I
Sbjct: 262 FGVISEVI 269
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 115 bits (277), Expect = 1e-24
Identities = 70/215 (32%), Positives = 99/215 (46%)
Frame = +2
Query: 104 PGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFX 283
PG + D + YN ++T H N L+PL++GA D+AFPR+N + +
Sbjct: 2 PGMQVVDFKTYNYLLTGHGVGMLFWWAIAAHIGGFGNFLLPLMIGAKDVAFPRLNALSWW 61
Query: 284 XXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXX 463
I N T T YPP S N + L +F +HL G SS
Sbjct: 62 AFFAANVLFLMTLIPGNHIMTMWTGYPPFSLN--NDAGVTALYVFVMHLLGASSIATAVN 119
Query: 464 XXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPA 643
+F + LFV + AGA+T+L D+ L T+FF+PA
Sbjct: 120 FLVTYITMRAPGYTFFKTNLFVHTLIAANVIQLVGVPSLAGAVTMLFLDKYLGTNFFNPA 179
Query: 644 GGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 748
GGDP++YQ++F F+ HP VY+ +LP FG S II
Sbjct: 180 KGGDPLIYQNIFWFYSHPVVYVQVLPVFGFYSEII 214
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 114 bits (275), Expect = 2e-24
Identities = 76/249 (30%), Positives = 102/249 (40%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXX 181
T+HK IG +Y +LG P + +YN + T H
Sbjct: 29 TDHKRIGIMYLVSAFVFFLIGGIEALLMRIQLGVPDNTFLTPDVYNQMFTMHGTTMIFLG 88
Query: 182 XXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVY 361
N +VPL++GA D+AFPR+N + V G Y
Sbjct: 89 LMPLNVGLG-NYMVPLMIGARDMAFPRLNALSIWLFIFGGLMLYVSFFVGGAPNVGWFAY 147
Query: 362 PPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVG 541
PL+ VD I + L G++S + +++PLFV
Sbjct: 148 APLTQKQFAPTAGVDYWIVGIGLTGVASIAGALNFIVTILNMRAPGMTLNRMPLFVWMQL 207
Query: 542 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 721
+ AF A LL DR+ T FF P GGD +L+QHLF FFGHPEVYILILP
Sbjct: 208 VVAFILIFAFPVLTVATIQLLFDRHFGTRFFLPNLGGDAVLWQHLFWFFGHPEVYILILP 267
Query: 722 GFGIISHII 748
GIIS ++
Sbjct: 268 TMGIISEVL 276
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 114 bits (275), Expect = 2e-24
Identities = 76/250 (30%), Positives = 108/250 (43%), Gaps = 2/250 (0%)
Frame = +2
Query: 5 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 184
+HKDIG LY EL + +YN ++T+H
Sbjct: 67 DHKDIGILYGVYGTIAFAWGGVSVLLMRTELATSSETLISPSLYNGLLTSHGITMLFLFG 126
Query: 185 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVEN--GAGTG*TV 358
N +PL++ A D+AFPRIN I F ++ A T T+
Sbjct: 127 TPMIAAFG-NYFIPLLIDADDMAFPRINAIAFWLLPPGAILIWSGFLIPGIATAQTSWTM 185
Query: 359 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 538
Y PLS ++ +VD+ + LHL G+S+ + L +F +
Sbjct: 186 YTPLSLQMS--SPAVDMMMLGLHLTGVSATMGAINFIATIFTERGEDVGWPDLDIFSWTM 243
Query: 539 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 718
+ A+ +LL DRN T+FF AGG DPI +QHLF FFGHPEVY+L+L
Sbjct: 244 LTQSGLILFAFPLFGSALIMLLLDRNFGTTFFTVAGG-DPIFWQHLFWFFGHPEVYVLVL 302
Query: 719 PGFGIISHII 748
P GI+S I+
Sbjct: 303 PPMGIVSLIL 312
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 112 bits (269), Expect = 1e-23
Identities = 75/250 (30%), Positives = 104/250 (41%), Gaps = 1/250 (0%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXX 181
T+HK +G +Y AEL PG ++ +N + T H
Sbjct: 36 TDHKQLGIMYIIMSFSFFFLGGLMALLIRAELFTPGLQFLSNEQFNQLFTMHGTVMLLLY 95
Query: 182 XXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT-G*TV 358
N ++PL +GAPD+AFPR+N F + GA G T+
Sbjct: 96 GTPIVWGFA-NYVLPLQIGAPDVAFPRLNAFGFWITTVGGVAMLTGFLTPGGAADFGWTM 154
Query: 359 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 538
Y PLS I G D+ I + GI S + ++P+F +
Sbjct: 155 YSPLSDAIHSPGLGSDMWIVGVGATGIGSVASAINMLTTILCLRAPGMTMFRMPIFTWNI 214
Query: 539 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 718
+ + A +L DR L +DPA GG +L+QHLF FFGHPEVY+L L
Sbjct: 215 FVVSVLALLIFPLLLAAALGVLYDRKLGGHLYDPANGGS-LLWQHLFWFFGHPEVYVLAL 273
Query: 719 PGFGIISHII 748
P FGI+S II
Sbjct: 274 PFFGIVSEII 283
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 111 bits (267), Expect = 2e-23
Identities = 76/250 (30%), Positives = 106/250 (42%), Gaps = 1/250 (0%)
Frame = +2
Query: 5 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS-LIGDDQIYNTIVTAHAXXXXXXX 181
+HK IG Y +L P + IG D+ YN I T H
Sbjct: 28 DHKIIGRRYTVTAFVFLALGGVLALLMRLQLAQPEARFIGPDR-YNQIFTMHGSNMMFLF 86
Query: 182 XXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVY 361
LVPL++G IAFPR+N + V+ G G Y
Sbjct: 87 AVPVMQAMAIY-LVPLMVGTRHIAFPRLNAFSYWMYLAGGLLLWIAFAVDTGPDIGWFAY 145
Query: 362 PPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVG 541
PLS G+ D+ + +S+ S D++PLFV ++
Sbjct: 146 VPLSGPQYAAGKRADIWAQMITFTEVSALAIAVEIVVTVFKQRAPGMSLDRIPLFVWSML 205
Query: 542 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 721
+T+F A T L+ DR + T FF+PA GGD +L+QHLF FFGHPEVYI+ LP
Sbjct: 206 VTSFLVILAMPAIMIASTSLILDRLVGTHFFNPAEGGDVLLWQHLFWFFGHPEVYIIFLP 265
Query: 722 GFGIISHIIS 751
G++S I++
Sbjct: 266 AVGMVSSIVA 275
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 109 bits (263), Expect = 5e-23
Identities = 74/251 (29%), Positives = 103/251 (41%), Gaps = 3/251 (1%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXX 181
T+ K IG Y EL P + + D +YN + T H
Sbjct: 34 TDAKVIGIQYIATAMLFLLVGGLLAMIVRGELITPPADLVDPSVYNGLYTMHGTVMLFLF 93
Query: 182 XXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENG-AGTG*TV 358
N L+P ++GAPD+AFP++N F G A +G
Sbjct: 94 LFPILNGFN-NLLIPTMIGAPDMAFPKLNAAAFWLVPVFSIVLMGSFFAPGGPASSGWWS 152
Query: 359 YPPLS--SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 532
YPP+S + + H L I ++ L+GISS F ++P+FV
Sbjct: 153 YPPMSLQNPLGHFINGEFLWILAVALSGISSIMGAINFVTTIIRMRAPGMGFFRMPVFVW 212
Query: 533 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 712
G +LL D + TSFF P GGGDP+L+QH F F+ HP VY+L
Sbjct: 213 TAWAAQTIQLIGLPALTGGAVMLLFDLSFGTSFFRPEGGGDPVLFQHFFWFYSHPAVYVL 272
Query: 713 ILPGFGIISHI 745
+LP FGI S +
Sbjct: 273 VLPVFGIFSEL 283
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 109 bits (263), Expect = 5e-23
Identities = 69/248 (27%), Positives = 103/248 (41%)
Frame = +2
Query: 5 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 184
+HK IG ++ EL PG I D YN + T H
Sbjct: 34 DHKRIGVMFLVATTISFALGGFFALLIRLELLTPGPTIMDAMTYNRMFTLHGVVMIFLFM 93
Query: 185 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 364
N L+P+++GA D+AFP++N + F +V+ GA TG T Y
Sbjct: 94 IPAIPSGFGNFLLPIMIGAKDVAFPKLNLLSFYVYLAGAVVALFG-MVQGGADTGWTFYT 152
Query: 365 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 544
P S+ + V L F L G SS + +LPLFV ++
Sbjct: 153 PYSTTTITKVVPVLLGAFIL---GFSSILTGLNFIVTTHTMRAPGMGWTRLPLFVWSIYA 209
Query: 545 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPG 724
T+ ++ ++ + FDPA GGDP+L+QH F F+ HP VYI++LP
Sbjct: 210 TSVIQILATPVLGMSLLLVAVEHAFGWGIFDPARGGDPVLFQHFFWFYSHPAVYIMVLPA 269
Query: 725 FGIISHII 748
+IS ++
Sbjct: 270 MAVISEVV 277
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 109 bits (261), Expect = 9e-23
Identities = 76/252 (30%), Positives = 106/252 (42%), Gaps = 2/252 (0%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXX 181
T+HKDIG LY +L P S Y VT H
Sbjct: 19 TDHKDIGLLYLVTSIAFLLIAGSLALLFRVQLAIPKSNFLTGDAYYEAVTVHGLIMLLWF 78
Query: 182 XXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGA-GTG*TV 358
N +VPL +GA D+AFPR+N + + E+GA G T+
Sbjct: 79 ASPFAFGLA-NYIVPLQIGARDLAFPRLNALSYWLYLLSGLVLLASFFTESGAPNVGWTL 137
Query: 359 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 538
Y PL++ I G +DLA ++ L +S + ++P+F ++
Sbjct: 138 YAPLTARIYTPGIGLDLAALAIFLFSLSVTLGTINFLVTIAAMRAPGIGWFKMPMFTWSI 197
Query: 539 GITAFXXXXXXXXXAGAITILLTDRNLNTSFF-DPAGGGDPILYQHLF*FFGHPEVYILI 715
T +LL DRNL T FF +PAGG +L+ HLF FFGHPEVYIL+
Sbjct: 198 LFTVILMLWAFPPLMVGGALLLLDRNLGTEFFLNPAGGA--LLWDHLFWFFGHPEVYILL 255
Query: 716 LPGFGIISHIIS 751
P G ++ +IS
Sbjct: 256 FPALGAMADVIS 267
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 106 bits (255), Expect = 5e-22
Identities = 71/249 (28%), Positives = 99/249 (39%)
Frame = +2
Query: 5 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 184
+HK +G +Y A+L P + D YN I T H
Sbjct: 52 DHKKLGIMYIISAVIMLFRGGVDGLMMRAQLALPNNSFLDSNHYNEIFTTHGTIMIIFMA 111
Query: 185 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 364
N +VPL +GA D+AFP +NN+ F ++ G T Y
Sbjct: 112 MPFLIGLI-NVVVPLQIGARDVAFPYLNNLSFWTFFVGAMLFNISFVIGGSPNAGWTSYM 170
Query: 365 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 544
PL+SN G + + L +AGI + + ++P+F I
Sbjct: 171 PLASNDMSPGPGENYYLLGLQIAGIGTLMTGINFMVTILKMRTKGMTLMRMPMFTWTTLI 230
Query: 545 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPG 724
T A+ +L DR FF GG P+L+ +LF +GHPEVYI+ILP
Sbjct: 231 TMVIIVFAFPVLTVALALLSFDRLFGAHFFTLEAGGMPMLWANLFWIWGHPEVYIVILPA 290
Query: 725 FGIISHIIS 751
FGI S IIS
Sbjct: 291 FGIFSEIIS 299
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 103 bits (246), Expect = 6e-21
Identities = 63/185 (34%), Positives = 89/185 (48%), Gaps = 6/185 (3%)
Frame = +2
Query: 212 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV-ENGAGTG*TVYPPLSSNIAH 388
N LVP ++GAPD+ +PRIN + F + ++G G T+YPPLS+
Sbjct: 86 NILVPKLIGAPDMYWPRINALSFWMQVPATVFMWSSLLFWQHGDSIGWTLYPPLST--IS 143
Query: 389 RGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXX 568
+ VDL + + +AG SS + LF +V +
Sbjct: 144 KSIGVDLILLGIIIAGFSSTLTGINFILTITRLRRPDIKMLDMSLFAWSVLAASMLMVTA 203
Query: 569 XXXXAGAITILLTDRNLNTSFF-----DPAGGGDPILYQHLF*FFGHPEVYILILPGFGI 733
A +LL +R+L FF DPA GDP L+QH+F FFGHPEVYIL+LP G+
Sbjct: 204 LPPLAAGAIMLLLERHLGMHFFTPVPGDPAASGDPRLFQHIFWFFGHPEVYILVLPAMGL 263
Query: 734 ISHII 748
+S +I
Sbjct: 264 VSEVI 268
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 103 bits (246), Expect = 6e-21
Identities = 64/248 (25%), Positives = 101/248 (40%)
Frame = +2
Query: 5 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 184
+HK I LY +L P + Q YN ++T H
Sbjct: 23 DHKKIAILYLVAGGFFFLVGGIEAMFIRIQLAKPENAFLSAQAYNEVMTMHGTTMIFLAA 82
Query: 185 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 364
N +VPL +GA D++FP +N + F + G T Y
Sbjct: 83 MPLLFALM-NAVVPLQIGARDVSFPFLNALGFWLFFFGHIFLNLSWFLGGAPDAGWTSYA 141
Query: 365 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 544
LS + +G +D + L ++G+ + ++ +LPLF +
Sbjct: 142 SLS--LHSKGHGIDFFVLGLQISGLGTLIAGINFLATIINMRAPGMTYMRLPLFTWTTFV 199
Query: 545 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPG 724
+ + +++ DR T+FF+P GG+ ++++HLF FGHPEVYILILP
Sbjct: 200 ASALILFAFPPLTVGLALMMLDRLFGTNFFNPELGGNTVIWEHLFWIFGHPEVYILILPA 259
Query: 725 FGIISHII 748
FGI S +I
Sbjct: 260 FGIFSEVI 267
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 101 bits (241), Expect = 3e-20
Identities = 58/124 (46%), Positives = 66/124 (53%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXX 181
TNHKD GTL AELG PG+L+GDDQ N IVTAHA
Sbjct: 11 TNHKDXGTLXXIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQXXNVIVTAHAFVMIFXM 70
Query: 182 XXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVY 361
N LVPL++GAPD+AFPR+NN+ F VE GAGTG TVY
Sbjct: 71 XMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVY 130
Query: 362 PPLS 373
PPL+
Sbjct: 131 PPLA 134
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 100 bits (239), Expect = 4e-20
Identities = 66/250 (26%), Positives = 101/250 (40%), Gaps = 1/250 (0%)
Frame = +2
Query: 5 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 184
+HK IG +Y +L P + + YN I+T H
Sbjct: 23 DHKKIGLMYTATAFFAFALAGVFSLLIRTQLAVPNNQFLTGEQYNQILTLHGATMLFFFI 82
Query: 185 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGA-GTG*TVY 361
N +VPL+LGA D+A PR+N + GA G T Y
Sbjct: 83 IQAGLTGFGNFVVPLMLGARDVALPRVNAFSYWAFLGAIVLALMSYFFPGGAPSVGWTFY 142
Query: 362 PPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVG 541
P S A VD + ++ L G SS S ++P++V +V
Sbjct: 143 YPFS---AQSESGVDFYLAAILLLGFSSLLGNANFVATIYNLRAQGMSLWKMPIYVWSVF 199
Query: 542 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 721
+ A ++L +R + S+F+PA GGDP+L+Q F F+ HP VY+++LP
Sbjct: 200 AASVLNLFSLAGLTAATLLVLLERKIGLSWFNPAVGGDPVLFQQFFWFYSHPTVYVMLLP 259
Query: 722 GFGIISHIIS 751
GI++ + S
Sbjct: 260 YLGILAEVAS 269
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 99.5 bits (237), Expect = 8e-20
Identities = 67/223 (30%), Positives = 99/223 (44%), Gaps = 15/223 (6%)
Frame = +2
Query: 128 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 307
+ Y +VT HA N L+PL++GA D+AFP +N + +
Sbjct: 86 EFYTVLVTMHATVMIFLVIIPILAGAFGNFLIPLMIGADDMAFPTLNMLSYWFMWPAFFF 145
Query: 308 XXXXXIVE-NGAGTG*TVYPPLS---SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXX 475
+ +GA G T YPPLS ++ G + L + + G+SS
Sbjct: 146 FGGAFFCDGHGAAAGWTSYPPLSDMTTSAPSSGAAQTLWLLGVTTVGVSSMLGSVNYMTT 205
Query: 476 XXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP----- 640
+ +LPL + A+ ITA A ++L DR + T FF P
Sbjct: 206 IIQMRAPGMTMFRLPLTIWAMFITALLQAFALPVLTAAGFMMLADRLIGTGFFLPEGLVV 265
Query: 641 ------AGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 751
AGGG P+L+QHLF F+ HP VYI+ILP G++S I++
Sbjct: 266 NNSPMAAGGGQPLLWQHLFWFYSHPAVYIMILPAMGMVSDILA 308
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 97.5 bits (232), Expect = 3e-19
Identities = 70/252 (27%), Positives = 103/252 (40%), Gaps = 2/252 (0%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDD-QIYNTIVTAHAXXXXXX 178
T+HK +G LY EL G I DD +YNT + H
Sbjct: 12 TDHKRVGILYLIGSIAAFAVAGIMAMLIRLELSQIGPTITDDPSVYNTWLYFHGAAMILA 71
Query: 179 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 358
N +PL++GA D+AFPR+N + + + T
Sbjct: 72 FQIPALTGFFANYFIPLMIGAKDVAFPRVNALSVWLFYAGVLVALTTFFIPDPPDIMWTG 131
Query: 359 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 538
YPP S I H + FS+ L G +S +++L +FV A
Sbjct: 132 YPPYSI-ITHGNTA--FYTFSVLLLGFASILGGVNFLTTVTFMRAPGIGWNKLNIFVWAT 188
Query: 539 GITAFXXXXXXXXXAG-AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 715
+ AF G A+T+L D+ + T FFD A GGD + YQ+LF F+ HP VY++
Sbjct: 189 -LAAFVLQLIFVPVLGTAVTMLTFDKYIGTHFFDAAAGGDALTYQNLFWFYSHPAVYVIF 247
Query: 716 LPGFGIISHIIS 751
LP ++ I++
Sbjct: 248 LPFMAMVFEIVA 259
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 96.7 bits (230), Expect = 5e-19
Identities = 72/250 (28%), Positives = 104/250 (41%), Gaps = 1/250 (0%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS-LIGDDQIYNTIVTAHAXXXXXX 178
T+H D+G LY AEL PG+ I D +N + T H
Sbjct: 18 THHTDVGLLYLISSLGFLFLGGALALLIRAELFFPGTQFIADSMTFNRMFTVHGTTLIFL 77
Query: 179 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 358
N VP+++ D+A+P++N I F + T
Sbjct: 78 FILPFASAVG-NYFVPIMVRYKDMAYPKLNAIAFWMIPPAGALVWLGFADFSWYAT---- 132
Query: 359 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 538
PP S I+ G + D+ IF L + GISS S Q+PL +
Sbjct: 133 -PPYSV-ISAPGPAADMWIFGLKILGISSILGSINFIVTILKCKHPDMSLGQVPLLAWSY 190
Query: 539 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 718
++ A A+ +LLTDR + FF+PA GGDPI Y HLF F HPEVY+L++
Sbjct: 191 LSSSLIVLVALPTFAAALLMLLTDRLGVSGFFNPAVGGDPIAYAHLFWFTFHPEVYVLVI 250
Query: 719 PGFGIISHII 748
P G++ ++
Sbjct: 251 PAIGMMYEMV 260
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 94.7 bits (225), Expect = 2e-18
Identities = 65/248 (26%), Positives = 95/248 (38%)
Frame = +2
Query: 5 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 184
NH D+G ++ A+L P S + YN + T H
Sbjct: 28 NHTDLGRMFLTVAVFFFVVGGVLAMLIRAQLATPRSAFLGPEHYNQVFTMHGTIMMFLFA 87
Query: 185 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 364
L+P +LG+ D+AFPR+ F + +G +YP
Sbjct: 88 IPVFEGFAVY-LLPKLLGSRDLAFPRLTAYGFWCYVFGGSMMIFSLLWGIAPDSGWFMYP 146
Query: 365 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 544
PLSS + G + D + + IS+ S ++P+F +
Sbjct: 147 PLSSTLGAPGINSDFWLIGITFVEISAIAAAVEITVTVLRYRAPGMSLSKMPIFAWYALV 206
Query: 545 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPG 724
TA +L +R + FF A GGD +L+QHLF FGHPEVYI+ LP
Sbjct: 207 TAVMILTGFPPLILGSILLELERAFDMPFFQAAAGGDALLWQHLFWLFGHPEVYIIFLPA 266
Query: 725 FGIISHII 748
G IS I+
Sbjct: 267 AGAISTIL 274
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 93.9 bits (223), Expect = 4e-18
Identities = 74/235 (31%), Positives = 100/235 (42%), Gaps = 15/235 (6%)
Frame = +2
Query: 92 ELGNPGSL-IGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 268
+LG PG+ D Y +T H N L+PL++GA D+ FP +N
Sbjct: 66 QLGFPGTFSFIDANQYLQFITMHGMIMVIYLLTALFLGGFGNYLIPLMVGARDMVFPYVN 125
Query: 269 NIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPP--LSSNIAHRGRSVDLAIFSLHLAGI 439
+ + V G G G T+YPP + S + + L + SL L I
Sbjct: 126 MLSYWVYLLAVLVLASAFFVPGGPTGAGWTLYPPQAILSGTPGQDWGIVLMLSSLILFII 185
Query: 440 SSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV-GITAFXXXXXXXXXAGAITILLTDRN 616
+ +LPL V + T G++ +LL DR
Sbjct: 186 GFTMGGLNYVVTVLQARTRGMTLMRLPLTVWGIFTATVMALLAFPALFVGSVMLLL-DRL 244
Query: 617 LNTSFFDPA----------GGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 751
L TSFF P GGG P+L+QHLF FFGHPEVYI+ LP FGI+S +IS
Sbjct: 245 LGTSFFMPTLVEMGQLSKYGGGSPLLFQHLFWFFGHPEVYIVALPAFGIVSDLIS 299
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 93.1 bits (221), Expect = 7e-18
Identities = 68/252 (26%), Positives = 98/252 (38%), Gaps = 4/252 (1%)
Frame = +2
Query: 5 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 184
+HK IG +Y +L PG + + +N + T HA
Sbjct: 28 DHKRIGIMYGVTGFFFFLVGGLEAWIMRLQLARPGLEVVTARTFNALFTMHATTMIFLGV 87
Query: 185 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAG----TG* 352
N +PL++GA D+AFPR+N + ++ G G
Sbjct: 88 MPLLSAFM-NYFLPLMIGARDVAFPRLNAFSYWIYLFGALFINAGWLMGTAGGHVPDIGW 146
Query: 353 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 532
Y L+S G D L L GI + + ++P+FV
Sbjct: 147 FGYANLTSVQFTSGLGPDFWTLGLLLLGIGTLVSGFNFIVTILNMRAPGMTLMKMPVFVW 206
Query: 533 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 712
+T+ A+ +L+ DR +FF+ GG + YQHLF FGHPEVYIL
Sbjct: 207 TTLVTSAIIIFAFPSVTVALIMLMFDRTFAANFFEVLRGGSVVFYQHLFWTFGHPEVYIL 266
Query: 713 ILPGFGIISHII 748
ILP GIIS +I
Sbjct: 267 ILPAMGIISEVI 278
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 92.7 bits (220), Expect = 9e-18
Identities = 57/180 (31%), Positives = 82/180 (45%)
Frame = +2
Query: 212 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 391
N +VPL +GA D+AFP +N++ F V N A TG YPPL+
Sbjct: 125 NIVVPLQIGARDVAFPFLNSLSFWLLVSAVILVNLSLGVGNFARTGWVAYPPLAELGFSP 184
Query: 392 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 571
VD I++L ++GI + +P+F
Sbjct: 185 DVGVDYYIWALQISGIGTTLTAINFLVTVIKMRAPGMKLMDMPIFTWTCTWANVLIATSF 244
Query: 572 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 751
GA+ +L DR L+ FF GG+ ++Y +LF +GHPEVYIL+LP FGI S ++S
Sbjct: 245 PILTGALAMLALDRYLDFHFFTAELGGNAMMYLNLFWAWGHPEVYILVLPAFGIFSEVVS 304
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 91.1 bits (216), Expect = 3e-17
Identities = 55/177 (31%), Positives = 79/177 (44%)
Frame = +2
Query: 218 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 397
++PL+LG D+ FPR+N + ++ G YPPL+ G
Sbjct: 105 IIPLMLGTRDMTFPRLNAFGYYIYLIAGVMMYAALLLRIAPDAGWFSYPPLAGASFSPGL 164
Query: 398 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 577
+D + IS+ S +++P+FV AV + +F
Sbjct: 165 GLDFYTTVVTFMEISALVAAIELIATIFKCKVPGMSLNRMPIFVWAVLVMSFMIVFALPP 224
Query: 578 XAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 748
A +L DR FF A GDPIL+QHLF FFGHPEVYI+ +P G++S II
Sbjct: 225 LVIASLMLALDRMAGMHFFT-AASGDPILWQHLFWFFGHPEVYIIFIPALGMVSSII 280
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 89.8 bits (213), Expect = 6e-17
Identities = 52/177 (29%), Positives = 81/177 (45%)
Frame = +2
Query: 218 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 397
L+PL++GA D+ FPR+ + + + G +Y PLS++ G
Sbjct: 124 LIPLMIGARDLVFPRLGAFGYYCYLFGGIIVLSSFLFDAAPDGGWFMYVPLSTSAYTEGL 183
Query: 398 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 577
S D + + LA I+S S ++P+ + + TAF
Sbjct: 184 SADFWLIGITLAEIASVTAAVEIIAAILCSRAPGMSLTKMPILMWYLLATAFMIAIAFPP 243
Query: 578 XAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 748
+L +R L FFD GGDP+L+QHLF FGHPEVYI+ LP G+++ ++
Sbjct: 244 LIIGSILLEAERLLGLPFFDHTLGGDPLLWQHLFWLFGHPEVYIIFLPAAGMVATML 300
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 89.8 bits (213), Expect = 6e-17
Identities = 56/180 (31%), Positives = 79/180 (43%)
Frame = +2
Query: 212 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 391
N VPL +GA D+AFP +N++ F V A TG YPPL+
Sbjct: 124 NLAVPLQIGARDVAFPFLNSLSFYLLLAGVLLVNISLGVGEFAKTGWVAYPPLAGIQYSP 183
Query: 392 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 571
G VD I++L L+G+ + +P+F
Sbjct: 184 GVGVDYYIWALQLSGLGTTLTGVNFLVTVMKMRAPGMKLMDMPIFTWTCTWANVLIVASF 243
Query: 572 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 751
A+ +L DR L+ F GG+P++Y +LF +GHPEVYILILP FG+ S + S
Sbjct: 244 PILTAALALLTVDRYLDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGVFSEVTS 303
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 89.4 bits (212), Expect = 8e-17
Identities = 62/248 (25%), Positives = 96/248 (38%)
Frame = +2
Query: 5 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 184
NH D+G ++ A+L +P S + Y + T H
Sbjct: 28 NHTDLGRMFLGASVVFFLIGGILAMLIRAQLASPRSAFVGAETYAQLFTMHGTIMMFLFA 87
Query: 185 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 364
L+P +LG+ D+A+PR++ F + +G +YP
Sbjct: 88 IPMFEGLTIY-LLPKMLGSRDLAYPRLSAYGFWCYVLGGSMLIVALLAGIAPDSGWFMYP 146
Query: 365 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 544
PL+S + G + D + + IS+ S D++P++ +
Sbjct: 147 PLASTLGSPGINSDFWLLGITFVEISAIAAAVEIVVTVLRFRAPGMSLDRMPIYGWYALV 206
Query: 545 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPG 724
TA +L +R FF A GGD +L+QHLF FGHPEVYI+ LP
Sbjct: 207 TATMILTGFPPLILGSILLELERAFGLPFFQVAEGGDSLLWQHLFWLFGHPEVYIIFLPA 266
Query: 725 FGIISHII 748
G IS I+
Sbjct: 267 AGAISTIL 274
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 89.0 bits (211), Expect = 1e-16
Identities = 67/224 (29%), Positives = 98/224 (43%), Gaps = 14/224 (6%)
Frame = +2
Query: 122 DDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXX 301
+ + Y +VT H N L+PL +GA D+A +N + +
Sbjct: 98 EPEFYLALVTMHGTIMVFFVLTAGLSGTFSNFLIPLQIGARDMASGFMNMLSYWFFFGSS 157
Query: 302 XXXXXXXIVENGAGTG*-TVYPPLSS---NIAHRGRSVDLAIFSLHLAGISSXXXXXXXX 469
+E G +G +YPPLS+ ++ G + + + S+ L IS
Sbjct: 158 VIMFASIFLETGPASGSWVIYPPLSALPQAMSGSGAGMTMWLISMALFIISVLLGGINYI 217
Query: 470 XXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP--- 640
SF +LPL + A ITA A +L+ DR+L TSFF
Sbjct: 218 TTVINLRVKGMSFTRLPLTIWAFFITAIIGLLSFPVLFSAALLLIFDRSLGTSFFLSEIY 277
Query: 641 -AG------GGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 751
AG GG P+L+QHLF F GHPEVYI+++P GI S +I+
Sbjct: 278 IAGEALHHQGGSPVLFQHLFWFLGHPEVYIVLIPALGITSEVIA 321
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 89.0 bits (211), Expect = 1e-16
Identities = 65/245 (26%), Positives = 95/245 (38%)
Frame = +2
Query: 5 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 184
+HK IG Y +L P + + Y+++ T H
Sbjct: 48 DHKRIGLRYIVTAFVFLLLGGVEALVMRIQLARPNATVLTPAQYDSLFTMHGVTMIFLYA 107
Query: 185 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 364
N L PL+LG+ D+AFPR+ + + G Y
Sbjct: 108 LPVLSGFA-NYLWPLMLGSRDMAFPRLTAFSYWSFLFAGLFLYASFPLGAVPDGGWFNYV 166
Query: 365 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 544
PL+S G ++D+ + L GIS+ S D+LP+ V
Sbjct: 167 PLTSLDYSAGANIDIYGLGMILLGISTTGGAANFVVTLLRMRAHGMSIDRLPIIVWGTLT 226
Query: 545 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPG 724
+ + A +L DRN T FFD A GG P+L+QHLF F HP VY+++LP
Sbjct: 227 ASVSNLVAVPSVSLAFLLLWLDRNAGTHFFDVAHGGRPLLWQHLFWMFAHPWVYVVVLPA 286
Query: 725 FGIIS 739
GI+S
Sbjct: 287 MGIVS 291
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 88.2 bits (209), Expect = 2e-16
Identities = 51/118 (43%), Positives = 61/118 (51%)
Frame = +2
Query: 92 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 271
ELG PGSL+ DDQ+YN +VTAH N LVPL+LGAPD+AFPR+NN
Sbjct: 24 ELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNN 83
Query: 272 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 445
+ F + G + PL G SVDLAIF LHLAG+SS
Sbjct: 84 MSFGFFPLHWHYYSFFTV--KGGLARDELSTPLYLVTISAGPSVDLAIFPLHLAGVSS 139
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 87.4 bits (207), Expect = 3e-16
Identities = 84/227 (37%), Positives = 97/227 (42%), Gaps = 1/227 (0%)
Frame = +2
Query: 8 HKDIGTL-YXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 184
HKD GTL + L G +IG QI VTA A
Sbjct: 1 HKDXGTLXFXFXXWSAXFXGXXFXLXXRXXLSXXGQVIGXGQIXXVGVTAXALVMIFFFV 60
Query: 185 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 364
L PL +GAP +A PR+ N+ F + G G VYP
Sbjct: 61 MPTLXGGFGXXLXPLXVGAPXMAXPRLXNMSFWLLPPSLXXLCLSVFIGXGVGXXWXVYP 120
Query: 365 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 544
P SS +AH +VDL IF LHLAGISS ++ LF
Sbjct: 121 PXSSGLAHSSGAVDLGIFXLHLAGISSXLGSMNFLVTLGNMKXKGLNYGNFSLFCWXXVX 180
Query: 545 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 685
A AIT+L R N SFF P G P + F F
Sbjct: 181 XXXXLILSXPVLAAAITMLXXXRXXNXSFFXPXXXGXPXXFPTFFXF 227
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 87.0 bits (206), Expect = 4e-16
Identities = 66/249 (26%), Positives = 95/249 (38%), Gaps = 1/249 (0%)
Frame = +2
Query: 5 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNP-GSLIGDDQIYNTIVTAHAXXXXXXX 181
N++ IG LY +L P L+G D YN I T H
Sbjct: 38 NNQVIGILYVGAAFLFFILAGILGLIMRTQLAVPENDLVGQD-FYNQIFTVHGTTMMFLF 96
Query: 182 XXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVY 361
L+P +L A D+ FPR++ + G +Y
Sbjct: 97 AVPVVEALGVM-LLPQMLAARDLPFPRLSAFAIWAYIVGGLVFFSTVFYDLAPKGGWFMY 155
Query: 362 PPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVG 541
PPL+ G + D + + IS+ S ++P+F A+
Sbjct: 156 PPLTLKEYSPGDNADFWLLGIGFIEISAIAGAIEIIVGTLRTRPPGMSLTRMPIFAWAML 215
Query: 542 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 721
I A A +L +R+ FF GGDP+L+QHLF FFGHPEVYI+ LP
Sbjct: 216 IFAAMIMIAFPAVILATMLLEIERSFGWPFFTAERGGDPLLWQHLFWFFGHPEVYIIFLP 275
Query: 722 GFGIISHII 748
G++S I+
Sbjct: 276 AAGLVSMIV 284
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 87.0 bits (206), Expect = 4e-16
Identities = 37/46 (80%), Positives = 42/46 (91%)
Frame = +2
Query: 614 NLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 751
N T+FFDPAGGGD IL+QHLF FFGHPEVYILILPGFG+ISH+I+
Sbjct: 191 NYYTTFFDPAGGGDXILFQHLFXFFGHPEVYILILPGFGMISHVIA 236
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 86.6 bits (205), Expect = 6e-16
Identities = 57/180 (31%), Positives = 82/180 (45%), Gaps = 1/180 (0%)
Frame = +2
Query: 212 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS-SNIAH 388
N LVP ++GA D+ +P+IN + F ++ G +Y PLS +
Sbjct: 80 NYLVPRMIGAHDLYWPKINALSFWMLVPAVILAAISPLL-GAVDLGWYMYAPLSVETTVN 138
Query: 389 RGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXX 568
G +L +L L+G+SS + ++PLFV TA
Sbjct: 139 YGLGTNLIQIALILSGLSSTLTGVNFVMTITKMKKVP--YLKMPLFVWGFFTTAILMIIA 196
Query: 569 XXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 748
+ +R T FFD A GG P+L+Q LF FFGHPEVYILILP G++S ++
Sbjct: 197 MPSLTAGLVFAYLERLWGTPFFDSALGGSPVLWQQLFWFFGHPEVYILILPAMGLVSELL 256
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 84.6 bits (200), Expect = 2e-15
Identities = 54/180 (30%), Positives = 80/180 (44%)
Frame = +2
Query: 212 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 391
N ++PL +G+ D+AFP +N + F I+ A TG YPPLS
Sbjct: 119 NIIIPLQIGSKDVAFPSLNLLSFWLTFFSVLLINISLIIGEFAKTGWLGYPPLSEKTFSP 178
Query: 392 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 571
VD +S+ ++GI + F+++ +F+ +
Sbjct: 179 WVGVDYWNWSIQISGIGTIISSINFITTILKLRKKKLFFNKISIFMWTCLCSNILILISF 238
Query: 572 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 751
+ + DR L+T F+ GG +LY +L +GHPEVYILILP FGI S IIS
Sbjct: 239 PILTILLFQIFLDRTLSTHFYSSFYGGQQMLYINLIWAWGHPEVYILILPSFGIFSEIIS 298
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 84.2 bits (199), Expect = 3e-15
Identities = 57/180 (31%), Positives = 77/180 (42%)
Frame = +2
Query: 212 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 391
N +VPL +GA D+AFP +N+I +V + G YPP + + +
Sbjct: 144 NYVVPLQIGARDVAFPILNSISLWLTAAGAALVMISLVVGAFSTGGWFGYPPYTETLYNP 203
Query: 392 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 571
G VD I+SL LA + S +PLF TA
Sbjct: 204 GIGVDYWIWSLTLASLGSTLTGINIAVTIYKKRAPGMKLYYMPLFTWTALCTAIMMIFAM 263
Query: 572 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 751
L DR L+ FF GG+ + + ++F FGHPEVYILILP FG+ S I S
Sbjct: 264 PPLTVVTLQLALDRYLDFHFFTNGLGGNQMNFLNMFWLFGHPEVYILILPAFGVYSEIFS 323
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 82.2 bits (194), Expect = 1e-14
Identities = 52/129 (40%), Positives = 59/129 (45%), Gaps = 2/129 (1%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXX 175
TN KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 8 TNAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIF 67
Query: 176 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*T 355
N LVP+++GAPD+AFPR+NNI F VE GAGTG T
Sbjct: 68 FMVMPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWT 127
Query: 356 VYPPLSSNI 382
V LS I
Sbjct: 128 VKCKLSQII 136
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 81.8 bits (193), Expect = 2e-14
Identities = 51/177 (28%), Positives = 78/177 (44%)
Frame = +2
Query: 218 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 397
L+P +LGA D+ FPR++ F V G + PPL++ G
Sbjct: 167 LLPNMLGARDLPFPRLSAYAFWAYLVGGLVFFASIFVGWAPDGGWFMNPPLTTETYSPGY 226
Query: 398 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 577
+ D + + IS+ + ++P+F A+ + A
Sbjct: 227 NADFWLLGIGFIEISAIAGAIEIIVGILRTRSPGMTLGRMPVFAWAMLVFALMIVFAFPA 286
Query: 578 XAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 748
A +L +R + FF GGDP+L+QHLF FFGHPEVYI+ LP G++S I+
Sbjct: 287 VILATALLELERAFHWPFFAAHLGGDPLLWQHLFWFFGHPEVYIIFLPAAGMVSMIV 343
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 81.8 bits (193), Expect = 2e-14
Identities = 67/233 (28%), Positives = 98/233 (42%), Gaps = 16/233 (6%)
Frame = +2
Query: 98 GNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIR 277
G PG ++ + Y +++T H N +P+ +GA D+AFPR N +
Sbjct: 75 GAPGDVM-TPEYYLSLLTMHGTLMVFFVLTNAPFAAFGNYFLPIQIGAEDMAFPRFNMMS 133
Query: 278 FXXXXXXXXXXXXXXIVENGAG-TG*TVYPPLSS--NIAHRGRSVDLAIFSLHLA--GIS 442
F + +G +G T Y LS+ A G + ++ + +A I+
Sbjct: 134 FWTTFAAFCVLIAAFFIPDGPPISGWTAYATLSAVGGDAGPGMAYGQTLWGISIAIFCIA 193
Query: 443 SXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLN 622
S S ++P+ A IT+ A +L DR
Sbjct: 194 SLLGSLNFIATTLDLRTKGMSLMRMPICTWAWFITSCIALLAFAVLLPACILLCLDRVAG 253
Query: 623 TSFFDPAG-----------GGDPILYQHLF*FFGHPEVYILILPGFGIISHII 748
TSFF P+G GG +L+QHLF FFGHPEVYI ILP GI+SHI+
Sbjct: 254 TSFFIPSGLVFNDHVIPHGGGSALLWQHLFWFFGHPEVYIAILPAMGIVSHIL 306
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 81.8 bits (193), Expect = 2e-14
Identities = 50/137 (36%), Positives = 69/137 (50%), Gaps = 3/137 (2%)
Frame = +2
Query: 347 G*TVYPPLSSNIAHRG-RSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ--L 517
G T P SSNI + G S D+ I S+ AGIS+ + +
Sbjct: 283 GWTFITPFSSNIKYTGVGSQDILILSVVFAGISTTISFTNLLITRRTLAMPGMRHRRVLM 342
Query: 518 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 697
P ++ +T A+ ++ DR+ T+FF+ A GGDPIL QHLF FFGHP
Sbjct: 343 PFVTISIFLTLRMLATITPVLGAAVIMMAFDRHWQTTFFEYAYGGDPILSQHLFWFFGHP 402
Query: 698 EVYILILPGFGIISHII 748
EVY+LI+P FG I+ I+
Sbjct: 403 EVYVLIIPTFGFINMIV 419
Score = 39.5 bits (88), Expect = 0.087
Identities = 27/94 (28%), Positives = 36/94 (38%), Gaps = 2/94 (2%)
Frame = +2
Query: 5 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXXX 178
NHK I Y EL +P S GD Y +VTAH
Sbjct: 59 NHKRIAINYLYFSMVTGLSGAALATMIRMELAHPESPFFKGDSLRYLQVVTAHGLIMVFF 118
Query: 179 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 280
N L+P +G+ D+A+PR+N+I F
Sbjct: 119 VVVPILFGGFANFLIPYHVGSKDVAYPRLNSIGF 152
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 81.0 bits (191), Expect = 3e-14
Identities = 60/250 (24%), Positives = 89/250 (35%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXX 181
T+HK IG LY +L P + YN ++T HA
Sbjct: 30 TDHKKIGLLYIIVSILGFCLGGLLALAIRVQLALPEQTLLVGTTYNQVLTMHAAIMLFFF 89
Query: 182 XXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVY 361
N +PL LG D+A PR+N G T Y
Sbjct: 90 LIPLGLFGFGNYFLPLQLGVRDVALPRLNTFAVWLFIASLILVVLGLFNGGAPSVGWTFY 149
Query: 362 PPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVG 541
PL+ + G SV + L+ G+ S ++P+F ++
Sbjct: 150 YPLTMDGNQTGVSVFMVAVILN--GLGSLLGSANFAATIVNLRAPGMGLWKMPVFAWSIF 207
Query: 542 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 721
T+ A + + L S F+P GG P+LYQ F F+ HP VY+++LP
Sbjct: 208 ATSILQLLTLGGLTAAALLTYLEIKLGLSMFNPGIGGVPVLYQQFFWFYSHPAVYVMLLP 267
Query: 722 GFGIISHIIS 751
GI + + S
Sbjct: 268 YLGIGAEVAS 277
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 80.2 bits (189), Expect = 5e-14
Identities = 39/65 (60%), Positives = 45/65 (69%)
Frame = +2
Query: 227 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 406
L+LGAPD+AFPR+NN+ F +VENGAGTG TVYPPLSS AH G SVD
Sbjct: 1 LMLGAPDMAFPRMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSSGTAHAGASVD 60
Query: 407 LAIFS 421
LAI+S
Sbjct: 61 LAIYS 65
Score = 59.7 bits (138), Expect = 8e-08
Identities = 29/56 (51%), Positives = 32/56 (57%)
Frame = +1
Query: 526 CMSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWT 693
CM C +Y TCFS S+Y IIN K KY IF W P +STFILIFWT
Sbjct: 97 CMICCNYCYFITSFFTCFSSSHYYIINWPKSKYFIFWPNWSSSPYSLSTFILIFWT 152
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 79.8 bits (188), Expect = 7e-14
Identities = 57/222 (25%), Positives = 88/222 (39%), Gaps = 14/222 (6%)
Frame = +2
Query: 128 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 307
+ Y + T HA N L+PL++GA D+AFP++N + +
Sbjct: 90 EFYTMLFTMHATVMIFLVIIPILAGMFGNFLIPLMIGADDMAFPKLNMLSYWFMWPAIAC 149
Query: 308 XXXXXIVENGAGTG*TVYP---PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXX 478
G G T YP L+ G + + + G SS
Sbjct: 150 FGMSFKYAGGPAAGWTSYPVLADLAQAAPGSGTAQTYWLLGVTFVGFSSMMGSINYMTTI 209
Query: 479 XXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAG---- 646
+F +LP+ + + ITA + + DR T FF P+G
Sbjct: 210 INMRAPGMTFFRLPMTIWGLFITAILQAFALPVLTAGGFMQVADRLFGTCFFYPSGLVIN 269
Query: 647 -------GGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 751
GG P+L+QHLF F+ HP VYI++LP G++S ++S
Sbjct: 270 NAAPTVGGGQPLLWQHLFWFYSHPAVYIMLLPIMGMVSDMLS 311
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 79.0 bits (186), Expect = 1e-13
Identities = 44/121 (36%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXX 175
TNHKDIGTLY EL PG+ I G+ Q+YN ++TAHA
Sbjct: 12 TNHKDIGTLYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYNVLITAHAFLMIF 71
Query: 176 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*T 355
N VP+++G+PD+AFPR+NNI F +VE G G+G T
Sbjct: 72 FMVMPAMIGGFGNWFVPILIGSPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGCGSGWT 131
Query: 356 V 358
V
Sbjct: 132 V 132
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 77.0 bits (181), Expect = 5e-13
Identities = 46/177 (25%), Positives = 75/177 (42%)
Frame = +2
Query: 218 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 397
L+P +LGA D+ FPR++ + + + +G +YPPL++ G
Sbjct: 126 LLPALLGARDLPFPRLSAYGYWCFLIGGVFVMGSILFDAAPKSGWFMYPPLATQ--DEGL 183
Query: 398 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 577
D+ + L ++S + +PL+ V +
Sbjct: 184 GSDIWLLGLSFIEVASIAAAVELIVGVLKCRPPGMRVNLMPLYAWYVLVVGGMILFAFPP 243
Query: 578 XAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 748
+ +R + FFDP GGDP+L+QHLF FGHPEVYI+ LP + + I+
Sbjct: 244 LIAGDLLFEMERGFDWPFFDPERGGDPLLWQHLFWIFGHPEVYIIFLPLIALAAMIV 300
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 77.0 bits (181), Expect = 5e-13
Identities = 64/259 (24%), Positives = 96/259 (37%), Gaps = 13/259 (5%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXX 181
TNHKDIG LY EL + G+ + YN V+ H
Sbjct: 20 TNHKDIGVLYLITALFFLVFGGVLALLFRLELISSGADLLGSMGYNQAVSTHGLLMVFWF 79
Query: 182 XXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVY 361
N LVPL +GA D+AFPR+N + + G T+Y
Sbjct: 80 ISPFAFGFA-NYLVPLQIGADDLAFPRLNALSYWLYLFSGILMGVSFFQGTTFAGGWTMY 138
Query: 362 PPLSSN--IAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 535
PL++ I G + +L + + +P+F +
Sbjct: 139 APLNTPAYIPGEGLGATSVVLALIMFTAAVTLGSVNFLTTMYRMRAEGLRMRDIPIFSLS 198
Query: 536 VGITAFXXXXXXXXXAGAITILLTDRNLNTSFF-----------DPAGGGDPILYQHLF* 682
+ +T + A+ IL +D L T++F D G +L+ HLF
Sbjct: 199 INLTVWMMLFAFAALLAALMILASDHILGTTYFQYSIDGTTMATDADNPGASLLWAHLFW 258
Query: 683 FFGHPEVYILILPGFGIIS 739
FFGHPEVYI+ P G+++
Sbjct: 259 FFGHPEVYIVFFPALGVMA 277
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 76.2 bits (179), Expect = 8e-13
Identities = 34/46 (73%), Positives = 35/46 (76%)
Frame = +1
Query: 613 KLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFTRIWYNFSYYF 750
K KYIIF S W F+STFILIFWT SLYFNFT IWYNFSYYF
Sbjct: 7 KFKYIIFWSSWSSWSYFMSTFILIFWTPSSLYFNFTSIWYNFSYYF 52
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 73.7 bits (173), Expect = 4e-12
Identities = 52/179 (29%), Positives = 79/179 (44%), Gaps = 1/179 (0%)
Frame = +2
Query: 218 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPPLSSNIAHRG 394
L+PL +G+ D+ +PR+N + + + G TG TVY PLSS
Sbjct: 111 LIPLAIGSRDMIYPRMNALGYWLFLFSGIMLWSGFFLPGGNLDTGWTVYEPLSSFKFTPY 170
Query: 395 RSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXX 574
D A ++ L GI + LPLFV AV A
Sbjct: 171 LGADTAAAAVVLRGIGTIIASTEILATIFKARAKGYRMMNLPLFVWAVFWVAAISWFVFP 230
Query: 575 XXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 751
G +LL ++ S++ GG +++++LF +FGHPEVY+L+LPG G + +S
Sbjct: 231 EITGLFFLLLVGNLMHASYYISNYGG-ALMWENLFWYFGHPEVYLLLLPGTGAMFDYLS 288
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 72.9 bits (171), Expect = 8e-12
Identities = 50/179 (27%), Positives = 76/179 (42%)
Frame = +2
Query: 212 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 391
N +VPL +GA D+AFP +N + V + + G PL+
Sbjct: 143 NIIVPLQIGARDMAFPYLNAVGLWLTAVAAALVMLSLFVGDFSHDGWIGLIPLTELPYSP 202
Query: 392 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 571
G VD ++++ + + + ++ +LP V T
Sbjct: 203 GVGVDYWMWAIQIGSVGTTLNAINMIATIVKLRAPGMTWSRLPFVVWTSLTTNIIALTAF 262
Query: 572 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 748
A+ +L DR L T FF GG+ +LY +LF +GHPEVY ++LP FG IS II
Sbjct: 263 PILGVALAMLGADRYLGTHFFTAGLGGNLMLYTNLFWIWGHPEVYFVVLPAFGFISEII 321
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 70.9 bits (166), Expect = 3e-11
Identities = 39/83 (46%), Positives = 48/83 (57%)
Frame = +2
Query: 365 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 544
PL+S+IAH G SVD+AIFSLHLAG+SS + D++PLF+ AV I
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSSILGSVNFMTTVINMRAKGMTLDRVPLFIWAVFI 131
Query: 545 TAFXXXXXXXXXAGAITILLTDR 613
T AGAIT+LLTDR
Sbjct: 132 TTVLLLLSLPVLAGAITMLLTDR 154
Score = 35.1 bits (77), Expect = 1.9
Identities = 18/42 (42%), Positives = 19/42 (45%)
Frame = +1
Query: 199 WRIWKLXXXXXXXXXXXXXPTNK*YKILTPTPLPYIINFKKN 324
W IWKL P NK YKILT PL Y K+N
Sbjct: 28 WWIWKLINSANVSGPWYGFPANKQYKILTSAPLTYTPINKRN 69
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 68.9 bits (161), Expect = 1e-10
Identities = 46/129 (35%), Positives = 56/129 (43%), Gaps = 2/129 (1%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXX 175
TN KDI LY EL N GS L G+ Q +N ++TAHA
Sbjct: 14 TNAKDIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILMIF 73
Query: 176 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*T 355
N L+PL+LGA D+AF R+NNI F +VE GAGTG T
Sbjct: 74 FFVMPALVGGFGNYLMPLMLGASDMAFARLNNISFWLLVPSLILILTSALVEAGAGTGWT 133
Query: 356 VYPPLSSNI 382
V SS +
Sbjct: 134 VKKICSSKM 142
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 62.9 bits (146), Expect = 8e-09
Identities = 40/121 (33%), Positives = 53/121 (43%), Gaps = 2/121 (1%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXX 175
TN KDI LY EL PG+ L G+ Q++N +V HA
Sbjct: 9 TNAKDIAILYFIFAIFCGMAGTAMSVIIRLELAAPGNQYLGGNHQLFNVLVVGHAVLMIF 68
Query: 176 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*T 355
N L+PL++GA D++F R+NNI F +VE+GAGTG T
Sbjct: 69 FLVMPALIGGFGNYLLPLMIGASDMSFARLNNISFWLLPPALVCLVTSTLVESGAGTGWT 128
Query: 356 V 358
V
Sbjct: 129 V 129
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 59.3 bits (137), Expect = 1e-07
Identities = 28/41 (68%), Positives = 31/41 (75%)
Frame = +2
Query: 323 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 445
+VE G G G TVYPPL+S + H G SVD AIFSLHLAG SS
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 58.4 bits (135), Expect = 2e-07
Identities = 31/70 (44%), Positives = 40/70 (57%)
Frame = +2
Query: 509 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FF 688
DQ+ LF ++ IT AG IT+LL+DRN N FF GG PIL+Q++ F
Sbjct: 12 DQINLFSWSISITVNLSILSLPMLAGTITMLLSDRNFNKFFFILIGGEYPILHQYMLWLF 71
Query: 689 GHPEVYILIL 718
GH +V LIL
Sbjct: 72 GHTDVLFLIL 81
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 50.4 bits (115), Expect = 5e-05
Identities = 20/23 (86%), Positives = 23/23 (100%)
Frame = +2
Query: 683 FFGHPEVYILILPGFGIISHIIS 751
FFGHPEVYILILPGFG+ISHI++
Sbjct: 2 FFGHPEVYILILPGFGMISHIVA 24
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 48.0 bits (109), Expect = 2e-04
Identities = 25/51 (49%), Positives = 29/51 (56%)
Frame = +1
Query: 529 MSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFIL 681
M C +YS +TC WSYYN IN SKLKYI+F F+ST IL
Sbjct: 84 MICSNYSFTIIIVSTCSCWSYYNTINWSKLKYILFWPSSSWGSYFMSTPIL 134
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 46.4 bits (105), Expect = 8e-04
Identities = 41/177 (23%), Positives = 65/177 (36%)
Frame = +2
Query: 218 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 397
L+PL+LG ++ FP++ + + G TG YPPL+ N G
Sbjct: 180 LIPLMLGTRNVVFPKLLGLSWWLLPPATFAVFMSPTT-GGFQTGWWGYPPLAQN---SGS 235
Query: 398 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 577
+ + ++S S ++P+FV + A
Sbjct: 236 GIVWYVLGAATILVASLLGAINIAGTMVYMRAKGMSLGRVPIFVWGLFAAATTLVVESPA 295
Query: 578 XAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 748
+ L+D + F+ G P+ Y F F HPEVY+ ILP F I I+
Sbjct: 296 TYTGALMDLSDMIAGSHFYT-GPTGHPLAYLDQFWFLFHPEVYVFILPAFAIWLEIL 351
>UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6;
Digenea|Rep: Cytochrome c oxidase subunit I -
Echinostoma hortense
Length = 154
Score = 45.6 bits (103), Expect = 0.001
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = +2
Query: 683 FFGHPEVYILILPGFGIISHI 745
FFGHPEVY+LILP FGI+SHI
Sbjct: 1 FFGHPEVYVLILPVFGIVSHI 21
>UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1;
Harmonia axyridis|Rep: Cytochrome c oxidase subunit 2 -
Harmonia axyridis (Multicolored Asian lady beetle)
Length = 193
Score = 44.8 bits (101), Expect = 0.002
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = +1
Query: 670 TFILIFWTS*SLYFNFTRIWYNFSYYF 750
+ ++IFW+S SLYFN IWYNF YY+
Sbjct: 2 SLVMIFWSSSSLYFNSPSIWYNFPYYY 28
>UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1;
Pachymerium ferrugineum|Rep: Cytochrome oxidase subunit
I - Pachymerium ferrugineum
Length = 219
Score = 44.0 bits (99), Expect = 0.004
Identities = 34/123 (27%), Positives = 41/123 (33%)
Frame = +1
Query: 256 PTNK*YKILTPTPLPYIINFKKNCRKWCRNRMNSLPPTFI*YRT*RKIRRSCYFFTTFSX 435
P NK +KIL TPL Y N C K C + +NSLP Y T R +F T
Sbjct: 79 PPNKQFKILIITPLTYTTNSIYGCSKRCSHSVNSLPAPCCKYLTLGPFRSYNHFCPTSCS 138
Query: 436 XXXXXXXXXXXXXXXXXTXXXXXXXXXXXXCMSCRDYSXXXXXXTTCFSWSYYNIINRSK 615
CM +YS + S+YNI K
Sbjct: 139 SVFNSSLNQLYYNNHQYARYSNNPWTNPSVCMKSNNYSCTSTSFSPSIGSSHYNITYWPK 198
Query: 616 LKY 624
KY
Sbjct: 199 PKY 201
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 38.7 bits (86), Expect = 0.15
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +2
Query: 698 EVYILILPGFGIISHIIS 751
EVYILILPGFG+ISHIIS
Sbjct: 155 EVYILILPGFGMISHIIS 172
>UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2;
Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase
subunit I - Eutetramorium sp. BLF m1
Length = 201
Score = 37.1 bits (82), Expect = 0.46
Identities = 27/78 (34%), Positives = 35/78 (44%)
Frame = +2
Query: 392 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 571
G L IFSL + S + D++ L ++ ITA
Sbjct: 124 GSXXXLXIFSLXIXXXSXIFSAXNFISXIINMRHTMLTMDKISLLSWSILITAVLLLLSL 183
Query: 572 XXXAGAITILLTDRNLNT 625
AGAIT+LLTDRN+NT
Sbjct: 184 PVLAGAITMLLTDRNMNT 201
>UniRef50_Q2ABI9 Cluster: NADH-ubiquinone oxidoreductase chain 2;
n=21; Neocoleoidea|Rep: NADH-ubiquinone oxidoreductase
chain 2 - Sepia officinalis (Common cuttlefish)
Length = 375
Score = 34.3 bits (75), Expect = 3.3
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +1
Query: 4 KS*RYWNIIFYFWYLIRNNWNIFKTFNS 87
KS YWNI+F+FWYLI ++ K NS
Sbjct: 344 KSQSYWNIMFHFWYLISFISHLAKINNS 371
>UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4;
Chloroflexaceae|Rep: Cytochrome c oxidase, subunit I -
Roseiflexus sp. RS-1
Length = 561
Score = 33.9 bits (74), Expect = 4.3
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +2
Query: 647 GGDPILYQHLF*FFGHPEVYILILPGF 727
G DP+L + LF F GHP VY +LP +
Sbjct: 224 GTDPVLARTLFWFTGHPIVYFWLLPAY 250
>UniRef50_Q35062 Cluster: CoxI intron2 ORF; n=2; Marchantia
polymorpha|Rep: CoxI intron2 ORF - Marchantia polymorpha
(Liverwort)
Length = 802
Score = 33.9 bits (74), Expect = 4.3
Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYN 139
TNHKDIGTLY EL PG+ I G+ Q+YN
Sbjct: 12 TNHKDIGTLYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYN 59
>UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 592
Score = 33.5 bits (73), Expect = 5.7
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +2
Query: 653 DPILYQHLF*FFGHPEVYILILPGF 727
+P+L + LF FFGHP VY +LP +
Sbjct: 209 NPLLARTLFWFFGHPVVYFWLLPAY 233
>UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7;
Locustacarus buchneri|Rep: Cytochrome oxidase subunit 1
- Locustacarus buchneri
Length = 185
Score = 33.1 bits (72), Expect = 7.6
Identities = 23/62 (37%), Positives = 30/62 (48%)
Frame = +1
Query: 541 DYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFT 720
+Y+ TT S S +N N SKL++I+ S PN I ILI T L+ N T
Sbjct: 94 NYNNTTDYFTTSSSRSNHNTTNSSKLQHILLRSFGGSGPNPIPASILILRTPSGLHSNST 153
Query: 721 RI 726
I
Sbjct: 154 SI 155
>UniRef50_Q8II85 Cluster: Putative uncharacterized protein; n=2;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 1420
Score = 32.7 bits (71), Expect = 10.0
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -3
Query: 612 RSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKGN*SNDILFN 490
+++NN +I S NNN N++ T TN + +N+I +N
Sbjct: 1038 KTINNNIINDTSQSSYNNNMNSIQNTNRTNSSSSNNNISYN 1078
>UniRef50_Q5ABE2 Cluster: Putative uncharacterized protein CLN3;
n=1; Candida albicans|Rep: Putative uncharacterized
protein CLN3 - Candida albicans (Yeast)
Length = 785
Score = 32.7 bits (71), Expect = 10.0
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = -3
Query: 666 YKIGSPPPAGSKNDVFKFRSVNN---IVIAPAKTGSDNNNKNAVIPTAH 529
Y++ +PP + +KN K S NN IA T ++NNN N+ +P H
Sbjct: 572 YQMVTPPNSANKNSN-KSNSANNNNTTTIATTTTTTNNNNNNSQLPAPH 619
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 572,400,896
Number of Sequences: 1657284
Number of extensions: 10146520
Number of successful extensions: 23930
Number of sequences better than 10.0: 111
Number of HSP's better than 10.0 without gapping: 22015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23638
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62146450145
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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