Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0367
         (785 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_05_0110 + 22470869-22470920,22471044-22471146,22473261-224733...    29   3.2  
11_01_0644 - 5180148-5180308,5181124-5181305,5181348-5181583           29   5.5  
11_06_0356 - 22654329-22654571,22654695-22654898,22655065-226553...    28   7.3  
11_04_0311 + 16232961-16233079,16235135-16237080,16237246-16237370     28   7.3  
01_06_1289 - 36010924-36011001,36011441-36011518,36012321-360124...    28   7.3  
10_04_0002 - 7372425-7372601,7372697-7372780,7372859-7373010,737...    28   9.7  
01_05_0320 - 20874691-20875230,20879337-20879590,20880014-208810...    28   9.7  

>05_05_0110 +
           22470869-22470920,22471044-22471146,22473261-22473358,
           22473430-22473530,22474052-22474129,22474578-22474655
          Length = 169

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -2

Query: 283 YTPFEDPGTPELGSHRWCPIYPVD 212
           + P EDP   EL S RW P++ V+
Sbjct: 97  HPPGEDPNGYELASERWTPVHTVE 120


>11_01_0644 - 5180148-5180308,5181124-5181305,5181348-5181583
          Length = 192

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = -1

Query: 563 DRFATATCSLCHPVVNNSGLLNTALEPWTRTAT 465
           D FAT T SL        G     ++PWT+T T
Sbjct: 147 DLFATGTASLACTFSGGFGSWKFGIDPWTQTCT 179


>11_06_0356 -
           22654329-22654571,22654695-22654898,22655065-22655319,
           22655435-22655626,22655738-22656046,22656149-22656355,
           22656450-22656527,22657493-22657747,22657850-22658000,
           22658269-22658500,22658631-22658886,22658960-22659091
          Length = 837

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 25/85 (29%), Positives = 36/85 (42%), Gaps = 6/85 (7%)
 Frame = +1

Query: 85  SILFSYSNGQADNFTTMAPFARSFCSP-----NSKDSDFQTVDLIAVYRLDRSDT-TGVT 246
           S+ FSY     D  T + P+  +  +P     +  +S       I  Y   RSD  T +T
Sbjct: 577 SLAFSYIKPNGDRLT-VGPWGGALPNPYTINLDPSESLLDVYGTIGPYVDSRSDVITSIT 635

Query: 247 LVQGSQDLQMAYRIGGGANLTLPLK 321
            V  S+D    Y  GGG   + P+K
Sbjct: 636 FVT-SKDTYGPYGTGGGVPFSTPVK 659


>11_04_0311 + 16232961-16233079,16235135-16237080,16237246-16237370
          Length = 729

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 14/66 (21%), Positives = 31/66 (46%)
 Frame = +1

Query: 58  WLPYVLVFLSILFSYSNGQADNFTTMAPFARSFCSPNSKDSDFQTVDLIAVYRLDRSDTT 237
           W+ ++    ++  S +  + D    +    R FC   S  +  + +DL+ +   ++SD+ 
Sbjct: 545 WIAHLTELKNLTLSVTVLRTDTLELLQKLPRMFCLIFSSWTSSKDLDLVDILEKNKSDSE 604

Query: 238 GVTLVQ 255
           G  LV+
Sbjct: 605 GQILVK 610


>01_06_1289 -
           36010924-36011001,36011441-36011518,36012321-36012421,
           36012506-36012603,36016213-36016315,36016435-36016486
          Length = 169

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -2

Query: 283 YTPFEDPGTPELGSHRWCPIYPVD 212
           + P +DP   EL S RW P++ V+
Sbjct: 97  HPPGDDPNGYELASERWTPVHTVE 120


>10_04_0002 -
           7372425-7372601,7372697-7372780,7372859-7373010,
           7373229-7373324,7373406-7373554,7373723-7373788,
           7373925-7373994,7374106-7374236,7376464-7376471,
           7377946-7378002
          Length = 329

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +2

Query: 191 RWI**PYIDWIDRTPPV*P*FRGPRIFK 274
           +W   P+ DWID T P+ P F G  + K
Sbjct: 152 KWGLRPFSDWIDDTLPIEPWFIGGSVIK 179


>01_05_0320 -
           20874691-20875230,20879337-20879590,20880014-20881087,
           20881259-20881511,20881548-20882369
          Length = 980

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +1

Query: 148 RSFCSPNSKDSDFQTVDLIAVYRLDRSDTTGVTLVQ 255
           + + S N +  D    D+I   +L R D  G+TLVQ
Sbjct: 760 KDYLSKNFEMKDLGEADVILNIKLQRGDEGGITLVQ 795


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,769,295
Number of Sequences: 37544
Number of extensions: 476192
Number of successful extensions: 1183
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1183
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2115411120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)