Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0367
         (785 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42839-7|AAC69012.1| 1722|Caenorhabditis elegans Drosophila crum...    33   0.23 
Z93389-9|CAB07670.2|  391|Caenorhabditis elegans Hypothetical pr...    29   5.0  
AL023821-2|CAA19437.2|  355|Caenorhabditis elegans Hypothetical ...    29   5.0  
Z74029-2|CAA98432.1|  334|Caenorhabditis elegans Hypothetical pr...    28   8.7  

>U42839-7|AAC69012.1| 1722|Caenorhabditis elegans Drosophila crumbs
            homolog protein 1 protein.
          Length = 1722

 Score = 33.1 bits (72), Expect = 0.23
 Identities = 16/40 (40%), Positives = 18/40 (45%)
 Frame = +2

Query: 356  VWREPSMLADNEGRGVFCEHVQITCCFLSF*CRNQGKWRS 475
            VW       DN  RG  C+H   TC  L F C N G  R+
Sbjct: 1385 VWNNTVCNCDNNWRGAHCQHQMDTC--LDFPCNNDGVCRT 1422


>Z93389-9|CAB07670.2|  391|Caenorhabditis elegans Hypothetical
           protein T13F3.2 protein.
          Length = 391

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
 Frame = -2

Query: 670 ACRHRLRQSSV---RWHC*SRKRRCSLDSTQHN 581
           AC    R+S V   R+HC +RK  C +DST+ +
Sbjct: 39  ACAAFFRRSLVCGMRYHCKTRKNDCRIDSTERH 71


>AL023821-2|CAA19437.2|  355|Caenorhabditis elegans Hypothetical
           protein Y102A5B.3 protein.
          Length = 355

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 16/47 (34%), Positives = 25/47 (53%)
 Frame = +1

Query: 547 AVANRSVHIAVDCVELNPVNISAYDFSNATSLTIVSNDDGTPAPIDL 687
           ++ N   HI +    LN  NI   D S+   + I +ND+GT A +D+
Sbjct: 281 SIYNVKEHIILGVAVLNDNNIYWLDGSSTVFINIGNNDNGTCAIMDV 327


>Z74029-2|CAA98432.1|  334|Caenorhabditis elegans Hypothetical
           protein C45B11.4 protein.
          Length = 334

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +1

Query: 49  MFFWLPYVLVFLSILFSYSNGQADNFTTM 135
           +F   P  LVFLSI F+Y +   +NF  +
Sbjct: 270 IFLLAPAALVFLSIFFNYYDQSLNNFIVL 298


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,823,680
Number of Sequences: 27780
Number of extensions: 378305
Number of successful extensions: 957
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 957
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)