Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0367
(785 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g58780.1 68418.m07362 dehydrodolichyl diphosphate synthase, p... 31 0.66
At3g43440.1 68416.m04602 expressed protein 30 1.5
At1g33420.1 68414.m04137 PHD finger family protein contains Pfam... 30 2.0
At5g58782.1 68418.m07363 dehydrodolichyl diphosphate synthase, p... 29 2.6
At5g14540.1 68418.m01704 proline-rich family protein contains pr... 29 2.6
At5g54620.1 68418.m06801 ankyrin repeat family protein contains ... 29 4.6
At2g14440.1 68415.m01616 leucine-rich repeat protein kinase, put... 29 4.6
At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E... 28 6.1
At5g54050.1 68418.m06722 DC1 domain-containing protein 28 6.1
At4g05450.1 68417.m00827 adrenodoxin-like ferredoxin 2 similar t... 28 6.1
At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)... 28 6.1
At4g17680.1 68417.m02641 expressed protein 28 8.1
>At5g58780.1 68418.m07362 dehydrodolichyl diphosphate synthase,
putative / DEDOL-PP synthase, putative similar to
GI:796076
Length = 302
Score = 31.5 bits (68), Expect = 0.66
Identities = 20/57 (35%), Positives = 30/57 (52%)
Frame = +1
Query: 457 PRKVAVLVQGSRAVFKSPELFTTGWHKLHVAVANRSVHIAVDCVELNPVNISAYDFS 627
PR VAV++ G+R K L T+ H+ A A R + + C +L +SA+ FS
Sbjct: 71 PRHVAVIMDGNRRWAKRAGLLTSQGHE---AGAKRLIEFSELCFKLGIHTVSAFAFS 124
>At3g43440.1 68416.m04602 expressed protein
Length = 238
Score = 30.3 bits (65), Expect = 1.5
Identities = 25/85 (29%), Positives = 40/85 (47%)
Frame = +1
Query: 409 RARSNNVLFSLILMPEPRKVAVLVQGSRAVFKSPELFTTGWHKLHVAVANRSVHIAVDCV 588
R RS S+IL P ++ ++ GS +VF LH+A A ++ ++
Sbjct: 116 RDRSTKPDGSMIL---PSQLTIIFGGSFSVFDGIPAEKVQ-EILHIAAAAKATE-TINLT 170
Query: 589 ELNPVNISAYDFSNATSLTIVSNDD 663
+NP A FSNA+++ VS D
Sbjct: 171 SINPALKRAISFSNASTVACVSTAD 195
>At1g33420.1 68414.m04137 PHD finger family protein contains Pfam
profile: PF00628: PHD-finger
Length = 697
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +1
Query: 151 SFCSPNSKDSDFQTVDLIAVYRLDRSDTTGVTLVQGSQDLQMAY 282
S C+P S D +++ + V+RL D ++ QDL+ Y
Sbjct: 409 SRCNPGSNDFEYRLESVNNVHRLSNQDVNNASVEHVKQDLRYLY 452
>At5g58782.1 68418.m07363 dehydrodolichyl diphosphate synthase,
putative / DEDOL-PP synthase, putative similar to
GI:796076
Length = 289
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/57 (35%), Positives = 30/57 (52%)
Frame = +1
Query: 457 PRKVAVLVQGSRAVFKSPELFTTGWHKLHVAVANRSVHIAVDCVELNPVNISAYDFS 627
PR VAV++ G+R K L T+ ++ A A R + A C +L +SA+ FS
Sbjct: 58 PRHVAVIMDGNRRWAKQTGLLTSQGYE---AGAKRLLEFADLCFKLGINTVSAFAFS 111
>At5g14540.1 68418.m01704 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 547
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +1
Query: 289 GGGANLTLPLKEVFPGGLPNRFSVEGTFNARGQRRPWSLLRARSNNVLFSLILMPEPR 462
G GA LP+ P GLP ++ + G P S RA ++V+ ++ M PR
Sbjct: 440 GSGAYPQLPMARPLPQGLPMASAISSGGSGGGSDSPRSGNRAPVDDVIDKVVSMGFPR 497
>At5g54620.1 68418.m06801 ankyrin repeat family protein contains
Pfam domain, PF00023: Ankyrin repeat
Length = 431
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +1
Query: 511 ELFTTGWHKLHVAVANRSVHIAVDCVELNP 600
+L + G LH+AV N V +A++ V++NP
Sbjct: 66 KLNSDGVSPLHLAVENHQVQLALELVKINP 95
>At2g14440.1 68415.m01616 leucine-rich repeat protein kinase,
putative similar to light repressible receptor protein
kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376;
contains leucine rich repeat (LRR) domains,
Pfam:PF00560; contains protein kinase domain,
Pfam:PF00069
Length = 886
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +3
Query: 615 LRLQQCHLTDDCLKR*RHAGTDRSLVALVELRPLR 719
+ + +C++ D CL + GT +++ +ELRPLR
Sbjct: 152 IHVTRCNILDICLVK---TGTTTPMISAIELRPLR 183
>At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E2;
identical to gi:992703, SP:P42747
Length = 198
Score = 28.3 bits (60), Expect = 6.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 283 YTPFEDPGTPELGSHRWCPIYPVD 212
+ P +DP EL S RW P++ V+
Sbjct: 126 HPPGDDPSGYELASERWTPVHTVE 149
>At5g54050.1 68418.m06722 DC1 domain-containing protein
Length = 580
Score = 28.3 bits (60), Expect = 6.1
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 6/43 (13%)
Frame = -1
Query: 542 CSLC---HPV---VNNSGLLNTALEPWTRTATFLGSGIKMREN 432
CSLC H + V SG+ +EPW RT+ + G +++ N
Sbjct: 31 CSLCSHYHSLSWQVFRSGVWQNEVEPWFRTSEYHGPALRISNN 73
>At4g05450.1 68417.m00827 adrenodoxin-like ferredoxin 2 similar to
SP|P46656 Adrenodoxin, mitochondrial precursor (Adrenal
ferredoxin) from Mus musculus, SP|P10109 Adrenodoxin,
mitochondrial precursor (Hepatoredoxin) from Homo
sapiens, SP|P29330 Adrenodoxin from Ovis aries; contains
Pfam profile: PF00111 2Fe-2S iron-sulfur cluster binding
domains; identical to cDNA GI: 28192430
Length = 197
Score = 28.3 bits (60), Expect = 6.1
Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
Frame = -1
Query: 554 ATATCSLCHPVVNNSGLLNTALEPWTRTATFLGSGIKMRENSTLFER--ARRRLHGLRCP 381
A+ CS CH +V ++ N EP L + E S L + AR L G+R
Sbjct: 120 ASLACSTCHVIVMDTEYYNKLEEPTDEENDMLDLAFGLTETSRLGCQVIARPELDGVR-- 177
Query: 380 RALKVPSTLNRF 345
L +PS F
Sbjct: 178 --LAIPSATRNF 187
>At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)
E2; identical to gi:992706
Length = 166
Score = 28.3 bits (60), Expect = 6.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 283 YTPFEDPGTPELGSHRWCPIYPVD 212
+ P +DP EL S RW P++ V+
Sbjct: 94 HPPGDDPSGYELASERWTPVHTVE 117
>At4g17680.1 68417.m02641 expressed protein
Length = 314
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +1
Query: 409 RARSNNVLFSLILMPEPRKVAVLVQGSRAVFKSPELFTTGWHKLH 543
R RS V S ++ P P K + ++ + + K+P + +TG H
Sbjct: 61 RKRSREVYSSALMNPPPPKPSQVIDITELLQKTPNVVSTGLRLFH 105
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,865,627
Number of Sequences: 28952
Number of extensions: 356485
Number of successful extensions: 959
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 934
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 959
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1765546400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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