Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0366
(367 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284; Eukary... 145 3e-34
UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S riboso... 132 2e-30
UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length... 129 2e-29
UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5; Eukaryot... 122 2e-27
UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8; Euthe... 115 3e-25
UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S riboso... 106 1e-22
UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2... 104 4e-22
UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2; Cyt... 103 1e-21
UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26; Eukaryo... 103 1e-21
UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n... 98 4e-20
UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 ... 95 3e-19
UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1; Encephal... 94 8e-19
UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n... 88 5e-17
UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n... 80 1e-14
UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus N... 72 4e-12
UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n... 71 7e-12
UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n... 70 1e-11
UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34; Archae... 70 1e-11
UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5; Sulfolo... 70 2e-11
UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1; Cenarch... 69 3e-11
UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6; Euryarc... 68 6e-11
UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3; Halobac... 64 6e-10
UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella... 64 1e-09
UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;... 61 5e-09
UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7; Archaea... 61 5e-09
UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1; Nanoarc... 58 5e-08
UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n... 57 9e-08
UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum l... 56 2e-07
UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured m... 54 6e-07
UniRef50_A3BJ14 Cluster: Putative uncharacterized protein; n=3; ... 49 2e-05
UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n... 48 4e-05
UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3; Fusobact... 48 4e-05
UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal ... 48 7e-05
UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2; Firmicut... 47 9e-05
UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17; Bacteri... 46 2e-04
UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5; Bacteria... 44 7e-04
UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 44 9e-04
UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6; Bacteria... 43 0.002
UniRef50_Q50301 Cluster: 30S ribosomal protein S5; n=2; Mycoplas... 42 0.003
UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep... 42 0.005
UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n... 41 0.006
UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellula... 41 0.006
UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast p... 40 0.011
UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3; Mycoplas... 40 0.014
UniRef50_UPI0000DA3DCA Cluster: PREDICTED: similar to 40S riboso... 40 0.019
UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep... 40 0.019
UniRef50_Q7UN03 Cluster: 30S ribosomal protein S5; n=3; Bacteria... 40 0.019
UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 40 0.019
UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2; Deinococ... 40 0.019
UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9; Firmicut... 39 0.032
UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1; Ch... 38 0.075
UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole ge... 37 0.099
UniRef50_Q2GEC2 Cluster: 30S ribosomal protein S5; n=1; Neoricke... 37 0.13
UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8; Bacteria... 36 0.23
UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae ... 36 0.30
UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiel... 36 0.30
UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 36 0.30
UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128; Bacter... 36 0.30
UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S riboso... 35 0.40
UniRef50_A4S3U8 Cluster: Predicted protein; n=2; Ostreococcus|Re... 35 0.53
UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40; Bacteri... 35 0.53
UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n... 35 0.53
UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellula... 34 0.70
UniRef50_Q7MTN0 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 34 0.92
UniRef50_Q4FLN5 Cluster: 30S ribosomal protein S5; n=4; Ricketts... 33 1.6
UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11; Bacteri... 33 1.6
UniRef50_A6NSE6 Cluster: Putative uncharacterized protein; n=1; ... 32 2.8
UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, wh... 32 2.8
UniRef50_A4QUU0 Cluster: Putative uncharacterized protein; n=2; ... 32 2.8
UniRef50_A2XN57 Cluster: Putative uncharacterized protein; n=1; ... 32 3.7
UniRef50_Q4PBG0 Cluster: Putative uncharacterized protein; n=1; ... 32 3.7
UniRef50_A0CLK5 Cluster: Chromosome undetermined scaffold_20, wh... 31 4.9
UniRef50_Q38AQ9 Cluster: Putative uncharacterized protein; n=1; ... 31 6.5
UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellul... 31 6.5
UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7; Chlamydi... 31 6.5
UniRef50_Q4S4D0 Cluster: Chromosome 2 SCAF14738, whole genome sh... 31 8.6
>UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284;
Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens
(Human)
Length = 293
Score = 145 bits (351), Expect = 3e-34
Identities = 66/93 (70%), Positives = 70/93 (75%)
Frame = +2
Query: 2 PHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNF 181
PHTVPCKVTG+CGSV VRLIPAPRGTGIVSAPVPKKLL MAG+ DCYTSARG T TLGNF
Sbjct: 177 PHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNF 236
Query: 182 XXXXXXXXXXXXXXLTPDLWRDIPLTKSPYSEF 280
LTPDLW++ TKSPY EF
Sbjct: 237 AKATFDAISKTYSYLTPDLWKETVFTKSPYQEF 269
>UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 237
Score = 132 bits (319), Expect = 2e-30
Identities = 61/93 (65%), Positives = 67/93 (72%)
Frame = +2
Query: 2 PHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNF 181
P+TVPCKVTG CGSV V LIPAPRGTG+VSAPVPKKLL MAG+ DCYTSAR T +LGNF
Sbjct: 121 PNTVPCKVTGHCGSVLVCLIPAPRGTGMVSAPVPKKLLMMAGIDDCYTSARDCTASLGNF 180
Query: 182 XXXXXXXXXXXXXXLTPDLWRDIPLTKSPYSEF 280
LTPDLW++ TKSPY EF
Sbjct: 181 AKATFDTISKTYTYLTPDLWKETVFTKSPYEEF 213
>UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length
enriched library, clone:1200003H09 product:ribosomal
protein S2, full insert sequence; n=13; Eutheria|Rep:
Adult male lung cDNA, RIKEN full-length enriched
library, clone:1200003H09 product:ribosomal protein S2,
full insert sequence - Mus musculus (Mouse)
Length = 235
Score = 129 bits (311), Expect = 2e-29
Identities = 60/87 (68%), Positives = 64/87 (73%)
Frame = +2
Query: 20 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXX 199
KVTG+CGSV VRLIPAPRGTGIVSAPVPKKLL MAG+ DCYTSARG T TLGNF
Sbjct: 125 KVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFD 184
Query: 200 XXXXXXXXLTPDLWRDIPLTKSPYSEF 280
LTPDLW++ TKSPY EF
Sbjct: 185 AISKTYSYLTPDLWKETVFTKSPYQEF 211
>UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5;
Eukaryota|Rep: 40S ribosomal protein S2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 253
Score = 122 bits (294), Expect = 2e-27
Identities = 53/93 (56%), Positives = 67/93 (72%)
Frame = +2
Query: 2 PHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNF 181
PHTVP KV+GKCGSVTVRL+PAPRG G+V+APV K+ LQ+AG++DCYT +RGST TLGNF
Sbjct: 150 PHTVPVKVSGKCGSVTVRLVPAPRGAGLVAAPVTKRFLQLAGIEDCYTQSRGSTKTLGNF 209
Query: 182 XXXXXXXXXXXXXXLTPDLWRDIPLTKSPYSEF 280
LTP+LW + P ++P E+
Sbjct: 210 VKAAFAAASLTYGILTPNLWAERPFGQTPIEEY 242
>UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8;
Eutheria|Rep: ribosomal protein S2 - Rattus norvegicus
Length = 233
Score = 115 bits (276), Expect = 3e-25
Identities = 56/87 (64%), Positives = 60/87 (68%)
Frame = +2
Query: 20 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXX 199
KVTG+CGSV VRL APRGTGIVSAPVPKKLL MA + DCYT ARG T TLGNF
Sbjct: 125 KVTGRCGSVLVRLFSAPRGTGIVSAPVPKKLLMMA-IDDCYTLARGCTATLGNFAKATFD 183
Query: 200 XXXXXXXXLTPDLWRDIPLTKSPYSEF 280
LTPDLW++ TKSPY EF
Sbjct: 184 AISKIYSYLTPDLWKETVFTKSPYQEF 210
>UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 213
Score = 106 bits (254), Expect = 1e-22
Identities = 48/58 (82%), Positives = 50/58 (86%)
Frame = +2
Query: 2 PHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLG 175
PHTVP KVTG+CGSV VRLIPAPRGTG VSAPVPKKLL MAG+ DCYTSARG T T G
Sbjct: 117 PHTVPGKVTGRCGSVLVRLIPAPRGTGFVSAPVPKKLLMMAGIDDCYTSARGHTATWG 174
>UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2
protein - Homo sapiens (Human)
Length = 97
Score = 104 bits (250), Expect = 4e-22
Identities = 48/73 (65%), Positives = 51/73 (69%)
Frame = +2
Query: 62 PAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXXLTPDLW 241
PAPRGTGIVSAPVPKKLL MAG+ DCYTSARG T TLGNF LTPDLW
Sbjct: 1 PAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLW 60
Query: 242 RDIPLTKSPYSEF 280
++ TKSPY EF
Sbjct: 61 KETVFTKSPYQEF 73
>UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2; n=12;
Eukaryota|Rep: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2 -
Ostreococcus lucimarinus CCE9901
Length = 273
Score = 103 bits (246), Expect = 1e-21
Identities = 50/93 (53%), Positives = 57/93 (61%)
Frame = +2
Query: 2 PHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNF 181
PHT+P KV GKCGSV VRLIPAPRG GIV++ KK+L MAG+ D YT +RG T TLGN
Sbjct: 167 PHTIPTKVHGKCGSVHVRLIPAPRGAGIVASGTVKKVLAMAGLHDVYTCSRGHTRTLGNS 226
Query: 182 XXXXXXXXXXXXXXLTPDLWRDIPLTKSPYSEF 280
LTPDLW + K P EF
Sbjct: 227 VKATYEALKNSYGFLTPDLWAETRFAKPPAQEF 259
>UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26;
Eukaryota|Rep: 40S ribosomal protein S2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 254
Score = 103 bits (246), Expect = 1e-21
Identities = 49/89 (55%), Positives = 59/89 (66%)
Frame = +2
Query: 2 PHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNF 181
PH++ K TGKCGSVTVRLIPAPRG+GIV++P KKLLQ+AGV+D YT + G T TL N
Sbjct: 151 PHSLATKTTGKCGSVTVRLIPAPRGSGIVASPAVKKLLQLAGVEDVYTQSNGKTRTLENT 210
Query: 182 XXXXXXXXXXXXXXLTPDLWRDIPLTKSP 268
LTP+LW + PL SP
Sbjct: 211 LKAAFVAIGNTYGFLTPNLWAEQPLPVSP 239
>UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n=1;
Bos taurus|Rep: UPI000057EB46 UniRef100 entry - Bos
Taurus
Length = 258
Score = 98.3 bits (234), Expect = 4e-20
Identities = 51/95 (53%), Positives = 59/95 (62%)
Frame = +2
Query: 2 PHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNF 181
PH VPC+VTG+CGS+ V LIPAPRGTG VSAPVP KLL MAG+ D +SA G T TLGNF
Sbjct: 153 PHMVPCRVTGRCGSLLVHLIPAPRGTGTVSAPVP-KLLMMAGIDDS-SSASGCTATLGNF 210
Query: 182 XXXXXXXXXXXXXXLTPDLWRDIPLTKSPYSEFKV 286
L PDL ++ KS Y +V
Sbjct: 211 TKAIFDTISKTHSYLIPDLQKETVFAKSLYQNSRV 245
>UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 -
Mus musculus (Mouse); n=3; Murinae|Rep: RBM27_MOUSE
Isoform 2 of Q5SFM8 - Mus musculus (Mouse) - Rattus
norvegicus
Length = 266
Score = 95.5 bits (227), Expect = 3e-19
Identities = 48/91 (52%), Positives = 56/91 (61%)
Frame = +2
Query: 8 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXX 187
TV CKVTG+C SV + LIP R I+SAPVPKKLL +A + DCYTSARG T TL NF
Sbjct: 162 TVSCKVTGQCVSVLICLIPPTRN--IISAPVPKKLLLLANIDDCYTSARGCTATLDNFDK 219
Query: 188 XXXXXXXXXXXXLTPDLWRDIPLTKSPYSEF 280
LTP+LW+ + KS Y EF
Sbjct: 220 ATFNAISNTYSYLTPNLWKGLVFAKSTYLEF 250
>UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S2 -
Encephalitozoon cuniculi
Length = 242
Score = 93.9 bits (223), Expect = 8e-19
Identities = 42/93 (45%), Positives = 57/93 (61%)
Frame = +2
Query: 2 PHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNF 181
PHTV CK +GKCG+ V++IPAPRGTGI+S V KK+ ++AG++D YT + G+T T NF
Sbjct: 138 PHTVSCKGSGKCGTSVVQVIPAPRGTGIISGSVNKKIFELAGIKDLYTLSFGATSTTENF 197
Query: 182 XXXXXXXXXXXXXXLTPDLWRDIPLTKSPYSEF 280
+ PD W + P T +P EF
Sbjct: 198 AKASIAALEATSSMILPDQWEEKPRTLNPLLEF 230
>UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000502977 UniRef100 entry -
Rattus norvegicus
Length = 140
Score = 87.8 bits (208), Expect = 5e-17
Identities = 42/59 (71%), Positives = 44/59 (74%)
Frame = +2
Query: 5 HTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNF 181
H V CKVTG CGSV V LIPA RGTGI SAPVP K L MAG+ DCYTSARG T +L F
Sbjct: 14 HIVLCKVTGCCGSVLVHLIPAHRGTGISSAPVPTKPLMMAGIDDCYTSARGCTASLDYF 72
>UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC060C UniRef100 entry -
Rattus norvegicus
Length = 206
Score = 79.8 bits (188), Expect = 1e-14
Identities = 38/52 (73%), Positives = 43/52 (82%)
Frame = +2
Query: 2 PHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARG 157
PHTV CKVTG GSV++ LIPAPR T I SAP+PKKLL MAG+ DC+TSARG
Sbjct: 156 PHTVLCKVTGH-GSVSLHLIPAPRDTVISSAPMPKKLLMMAGINDCHTSARG 206
>UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 238
Score = 71.7 bits (168), Expect = 4e-12
Identities = 31/58 (53%), Positives = 46/58 (79%)
Frame = +2
Query: 5 HTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 178
H+VP KV GK GSVT+ +IPAPRG G+V+ K+LL++AG++D +T+A+GST T+ +
Sbjct: 165 HSVPFKVKGKGGSVTIEIIPAPRGLGLVAGGKIKRLLELAGLKDAWTTAKGSTPTMNS 222
>UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBFACC UniRef100 entry -
Rattus norvegicus
Length = 172
Score = 70.9 bits (166), Expect = 7e-12
Identities = 37/57 (64%), Positives = 39/57 (68%)
Frame = +2
Query: 11 VPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNF 181
V KVT GSV V LIPAPRGTGIVSAPV K L AG+ +CY SAR T TL NF
Sbjct: 59 VQYKVTSHYGSVLVHLIPAPRGTGIVSAPVLTKFLMNAGIYNCYISARCYTATLYNF 115
>UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB449D UniRef100
entry - Canis familiaris
Length = 196
Score = 70.1 bits (164), Expect = 1e-11
Identities = 40/81 (49%), Positives = 45/81 (55%)
Frame = +2
Query: 2 PHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNF 181
PHTV C+VT SV V I APRGT I+SAPVPKKLL+MA + D + ARG T L N
Sbjct: 77 PHTVSCRVTRLYCSVLVHHISAPRGTDILSAPVPKKLLRMASIDDGDSLARGCTAILDN- 135
Query: 182 XXXXXXXXXXXXXXLTPDLWR 244
LT D WR
Sbjct: 136 VIKATYDISKTYVSLTSDFWR 156
>UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34;
Archaea|Rep: 30S ribosomal protein S5P - Pyrococcus
furiosus
Length = 236
Score = 70.1 bits (164), Expect = 1e-11
Identities = 34/60 (56%), Positives = 41/60 (68%)
Frame = +2
Query: 2 PHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNF 181
PH+VP V GK GSV VRLIP PRG G+V V KK+L++AGVQD ++ G T T NF
Sbjct: 138 PHSVPFAVEGKEGSVRVRLIPGPRGLGLVIGDVGKKILRLAGVQDVWSQTFGETRTTVNF 197
>UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S5P -
Sulfolobus solfataricus
Length = 214
Score = 69.7 bits (163), Expect = 2e-11
Identities = 31/60 (51%), Positives = 42/60 (70%)
Frame = +2
Query: 2 PHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNF 181
PH++P KV GK GSV V L+PAP+GTG+V V K LL AG++D +++ +G T T NF
Sbjct: 131 PHSLPFKVVGKAGSVEVDLLPAPKGTGLVVGSVLKTLLTYAGIKDAWSTTKGETRTTENF 190
>UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1;
Cenarchaeum symbiosum|Rep: 30S ribosomal protein S5P -
Cenarchaeum symbiosum
Length = 219
Score = 68.5 bits (160), Expect = 3e-11
Identities = 29/55 (52%), Positives = 43/55 (78%)
Frame = +2
Query: 5 HTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGT 169
H+VP KV GK GSV + ++PAPRG G+V+ ++LL++AG++D YT+A+GST T
Sbjct: 146 HSVPFKVRGKGGSVVIEILPAPRGLGLVAGGKIRRLLELAGLKDAYTTAKGSTPT 200
>UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S5P -
Methanococcus maripaludis
Length = 225
Score = 67.7 bits (158), Expect = 6e-11
Identities = 30/60 (50%), Positives = 39/60 (65%)
Frame = +2
Query: 2 PHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNF 181
PH++P G CGSV V L+PAPRG G+V+ V K +L +AGV+D +T G T T NF
Sbjct: 134 PHSIPFTAKGACGSVKVELLPAPRGVGLVAGNVAKAVLGLAGVKDAWTKTFGDTRTTYNF 193
>UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 212
Score = 64.5 bits (150), Expect = 6e-10
Identities = 28/60 (46%), Positives = 39/60 (65%)
Frame = +2
Query: 2 PHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNF 181
PHTV + GK GSV V L PAPRG G+ +K+L++AG++D +T + G+T T NF
Sbjct: 125 PHTVALRTEGKAGSVEVELQPAPRGLGLAGGETVRKVLELAGIEDIWTRSSGNTRTTVNF 184
>UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella
natans|Rep: Ribosomal protein S2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 266
Score = 63.7 bits (148), Expect = 1e-09
Identities = 29/80 (36%), Positives = 46/80 (57%)
Frame = +2
Query: 2 PHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNF 181
P+T+ K +GK GSV V + PAP+GTGIV++ +L+++G++DC+T + G T + N
Sbjct: 183 PNTIKYKTSGKAGSVVVCIKPAPKGTGIVASKFQLNVLKISGIRDCFTKSFGRTKSSFNT 242
Query: 182 XXXXXXXXXXXXXXLTPDLW 241
+TPD W
Sbjct: 243 IKATFNALSSSYKFVTPDYW 262
>UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;
n=2; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 208
Score = 61.3 bits (142), Expect = 5e-09
Identities = 32/60 (53%), Positives = 39/60 (65%)
Frame = -2
Query: 180 KFPKVPVEPRADV*QSCTPAI*RSFLGTGADTIPVPRGAGISRTVTEPHLPVTLQGTVCG 1
K PKV V+P A V QS P+ FLGT A+ +PVP GAG+ T TEP P+TL G +CG
Sbjct: 12 KSPKVAVQPLAHVQQSSIPSSSSHFLGTEAEVMPVPMGAGMKSTRTEPQWPITLCG-LCG 70
>UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7;
Archaea|Rep: 30S ribosomal protein S5P - Picrophilus
torridus
Length = 221
Score = 61.3 bits (142), Expect = 5e-09
Identities = 29/60 (48%), Positives = 38/60 (63%)
Frame = +2
Query: 2 PHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNF 181
PHT+P V GK GSV+V L PAP+G G+ V K +L+MAG+ D + A G T T N+
Sbjct: 123 PHTLPFLVNGKSGSVSVTLKPAPQGVGLAVGDVVKVILRMAGIDDAWGFAAGHTKTTVNY 182
>UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S5P -
Nanoarchaeum equitans
Length = 231
Score = 58.0 bits (134), Expect = 5e-08
Identities = 27/59 (45%), Positives = 39/59 (66%)
Frame = +2
Query: 2 PHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 178
PH++P +V GK GSV V L PAP+G GIV+ KK+ ++AG++D + + G T T N
Sbjct: 138 PHSIPYQVEGKSGSVRVILKPAPKGVGIVADDEIKKIFRLAGIKDVWVRSFGKTKTKMN 196
>UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n=1;
Mus musculus|Rep: UPI0000D62CF0 UniRef100 entry - Mus
musculus
Length = 215
Score = 57.2 bits (132), Expect = 9e-08
Identities = 37/88 (42%), Positives = 45/88 (51%)
Frame = +2
Query: 8 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXX 187
T PCK TG S++ L P IVS VP+KL+ A + CYTSAR T TLGN
Sbjct: 107 TYPCKRTG--WSISF-LFPETLAF-IVSVLVPRKLMLRASIDSCYTSARSYTVTLGNIAK 162
Query: 188 XXXXXXXXXXXXLTPDLWRDIPLTKSPY 271
TP+LW++ TKSPY
Sbjct: 163 ATFDAVSKTSHS-TPNLWKEAVFTKSPY 189
>UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S5 -
Halorubrum lacusprofundi ATCC 49239
Length = 265
Score = 56.0 bits (129), Expect = 2e-07
Identities = 24/53 (45%), Positives = 37/53 (69%)
Frame = +2
Query: 20 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 178
K GK GSVTV + PAP+G G+ +A + +L++AGV+D +T++ G+T T N
Sbjct: 182 KAEGKAGSVTVEIQPAPQGLGLAAAETVRNILELAGVEDAWTNSDGNTRTTVN 234
>UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein S5 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 202
Score = 54.4 bits (125), Expect = 6e-07
Identities = 24/58 (41%), Positives = 38/58 (65%)
Frame = +2
Query: 8 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNF 181
+VP K+TG+ GS V L+PAP G G+V + +++L +AGV D ++ + G T T N+
Sbjct: 112 SVPLKITGRSGSTRVTLMPAPAGKGLVVSDYGRRVLTLAGVTDVWSRSAGQTRTTINY 169
>UniRef50_A3BJ14 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 163
Score = 49.2 bits (112), Expect = 2e-05
Identities = 20/36 (55%), Positives = 29/36 (80%)
Frame = +2
Query: 74 GTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNF 181
G+ +V+ VPKK+L+ AG++D +TS+RGST TL NF
Sbjct: 2 GSSVVATRVPKKVLKFAGIEDVFTSSRGSTKTLSNF 37
>UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC004A UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 48.4 bits (110), Expect = 4e-05
Identities = 25/44 (56%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = +2
Query: 2 PHTVPCKVTG-KCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGV 130
PHT+PC VT + V V L APRGTG VSA VPKKL +A +
Sbjct: 129 PHTIPCDVTATEKNLVLVCLTTAPRGTGTVSASVPKKLPLLASI 172
>UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3;
Fusobacterium nucleatum|Rep: 30S ribosomal protein S5 -
Fusobacterium nucleatum subsp. nucleatum
Length = 164
Score = 48.4 bits (110), Expect = 4e-05
Identities = 18/52 (34%), Positives = 34/52 (65%)
Frame = +2
Query: 5 HTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 160
+T+P ++ GK G+ T+ + PA GTG+++ +++L++ GV D T +GS
Sbjct: 77 NTIPHEIAGKWGATTLWMAPAYEGTGVIAGSASREILELVGVHDILTKIKGS 128
>UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S2 - Macaca mulatta
Length = 272
Score = 47.6 bits (108), Expect = 7e-05
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = +2
Query: 2 PHTVPCKVTGKCGSVTVRLIPAP 70
PHTVPCKVTG+C SV V LIPAP
Sbjct: 117 PHTVPCKVTGRCSSVLVHLIPAP 139
>UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2;
Firmicutes|Rep: 30S ribosomal protein S5 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 203
Score = 47.2 bits (107), Expect = 9e-05
Identities = 19/50 (38%), Positives = 32/50 (64%)
Frame = +2
Query: 23 VTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTL 172
V G+ G+ V L+PAP GTGI++ + ++++AG D YT +RG+ +
Sbjct: 124 VNGRHGAAKVMLLPAPEGTGIIAGGPVRAVVELAGFTDIYTKSRGANAPM 173
>UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17;
Bacteria|Rep: 30S ribosomal protein S5 - Leptospira
interrogans
Length = 187
Score = 46.0 bits (104), Expect = 2e-04
Identities = 21/53 (39%), Positives = 33/53 (62%)
Frame = +2
Query: 5 HTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 163
HT+P +V GK S V L P+ GTGI++ + +++ AG+QD T + GS+
Sbjct: 98 HTIPHEVIGKFKSARVILKPSTAGTGIIAGASVRSIVEKAGIQDVLTKSWGSS 150
>UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5;
Bacteria|Rep: 30S ribosomal protein S5 - Aquifex
aeolicus
Length = 208
Score = 44.4 bits (100), Expect = 7e-04
Identities = 21/52 (40%), Positives = 30/52 (57%)
Frame = +2
Query: 8 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 163
TVP V G G+ + ++PA RGTG+V+ K + ++AG D T GST
Sbjct: 97 TVPHDVIGTFGATKIIVLPARRGTGVVAGGAAKPVFELAGYTDVLTKIIGST 148
>UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Oceanobacillus
iheyensis
Length = 167
Score = 44.0 bits (99), Expect = 9e-04
Identities = 20/51 (39%), Positives = 32/51 (62%)
Frame = +2
Query: 8 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 160
T+P ++ G+ GS V + PA GTG++S + +L++AGV D T + GS
Sbjct: 81 TIPHEIHGQFGSGNVLMKPAAEGTGVISGGPVRAILELAGVGDILTKSLGS 131
>UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6;
Bacteria|Rep: 30S ribosomal protein S5 - Thermotoga
maritima
Length = 178
Score = 42.7 bits (96), Expect = 0.002
Identities = 20/55 (36%), Positives = 34/55 (61%)
Frame = +2
Query: 8 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTL 172
T+P +V G+ + V L PA GTGI++ + ++++AG+Q+ T + GST L
Sbjct: 84 TIPHEVIGRQDASKVLLKPAAPGTGIIAGGTVRAVVELAGIQNILTKSLGSTNPL 138
>UniRef50_Q50301 Cluster: 30S ribosomal protein S5; n=2;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
pneumoniae
Length = 219
Score = 41.9 bits (94), Expect = 0.003
Identities = 18/46 (39%), Positives = 29/46 (63%)
Frame = +2
Query: 20 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARG 157
+V G+ G+ V L PAP+GTGI++ + ++++AG D YT G
Sbjct: 139 EVIGRSGASRVLLKPAPQGTGIIAGGAIRAIIELAGYSDIYTKNLG 184
>UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep:
MGC27348 protein - Homo sapiens (Human)
Length = 172
Score = 41.5 bits (93), Expect = 0.005
Identities = 21/67 (31%), Positives = 32/67 (47%)
Frame = +1
Query: 1 ATHRPLQGHRQVWFRNSPADSCPSWYWYCVCASS*EASSDGWCTGLLHVSSWFNWHLGKF 180
A HRPLQG R + +W+ + + + EA+ D W LLH+S + H G+
Sbjct: 104 APHRPLQGDRPLRLCAGALHPRAQGHWHRLSSCAQEAAHDSWYLRLLHLSQGLHCHPGQL 163
Query: 181 C*SHIRC 201
H+ C
Sbjct: 164 RQRHLGC 170
>UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n=1;
Mus musculus|Rep: UPI000056598D UniRef100 entry - Mus
musculus
Length = 239
Score = 41.1 bits (92), Expect = 0.006
Identities = 34/96 (35%), Positives = 39/96 (40%), Gaps = 4/96 (4%)
Frame = +2
Query: 2 PHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQM----AGVQDCYTSARGSTGT 169
P P ++ S+ LI AP T I+S VPK LL + A D SA G T
Sbjct: 141 PSVCPMQIRDYHSSMLACLITAP-STCIISGLVPKNLLLLLLLLASTDDRCISASGCTDA 199
Query: 170 LGNFXXXXXXXXXXXXXXLTPDLWRDIPLTKSPYSE 277
LG LTPDLW TK YSE
Sbjct: 200 LGRLAKTTFDAISKTYSCLTPDLWNK---TKPLYSE 232
>UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellular
organisms|Rep: 30S ribosomal protein S5 - Gloeobacter
violaceus
Length = 223
Score = 41.1 bits (92), Expect = 0.006
Identities = 17/58 (29%), Positives = 34/58 (58%)
Frame = +2
Query: 5 HTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 178
+++P ++G G+ V L PA GTG+++ + +L++AG+++ + GS L N
Sbjct: 135 NSIPHPMSGSSGAANVFLKPASGGTGVIAGGAVRTVLELAGIKNVLAKSLGSKSPLNN 192
>UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast
precursor; n=12; cellular organisms|Rep: 30S ribosomal
protein S5, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 303
Score = 40.3 bits (90), Expect = 0.011
Identities = 20/57 (35%), Positives = 30/57 (52%)
Frame = +2
Query: 8 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 178
T P + G G+ V L PA GTG+++ + +L+MAGV++ GS L N
Sbjct: 217 TFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNN 273
>UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
penetrans
Length = 234
Score = 39.9 bits (89), Expect = 0.014
Identities = 18/51 (35%), Positives = 31/51 (60%)
Frame = +2
Query: 20 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTL 172
+V GK G+ V + PAP+GTG+++ K +L++ G +D Y+ G +L
Sbjct: 152 EVIGKHGAGKVLIKPAPKGTGVIAGGPIKVVLELCGFKDVYSKNLGKNTSL 202
>UniRef50_UPI0000DA3DCA Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Rattus norvegicus
Length = 68
Score = 39.5 bits (88), Expect = 0.019
Identities = 23/64 (35%), Positives = 31/64 (48%)
Frame = +2
Query: 71 RGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXXLTPDLWRDI 250
RG + + + KKLL +A +QDCY AR + LGN+ LT DLW +
Sbjct: 6 RGRAVFTTVLKKKLL-LASIQDCYMIARVHSLMLGNYAKATFYVFSMTSNYLTFDLWTEN 64
Query: 251 PLTK 262
TK
Sbjct: 65 VCTK 68
>UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep:
Ribosomal protein S5 - Victivallis vadensis ATCC BAA-548
Length = 181
Score = 39.5 bits (88), Expect = 0.019
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +2
Query: 8 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 163
T+P +V K G V L PA GTG+++ + +L++AGV+D + G++
Sbjct: 84 TLPHEVEVKFGGARVLLRPASAGTGLIAGGAVRAILELAGVEDVLAKSLGAS 135
>UniRef50_Q7UN03 Cluster: 30S ribosomal protein S5; n=3;
Bacteria|Rep: 30S ribosomal protein S5 - Rhodopirellula
baltica
Length = 177
Score = 39.5 bits (88), Expect = 0.019
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +2
Query: 8 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 160
++P +V G+ G+ V LIPA GTGI++ + + + G+ D T + G+
Sbjct: 90 SIPHQVWGRYGAARVVLIPAGAGTGIIAGQAVRAVCEACGIHDILTKSYGT 140
>UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Mesoplasma
florum (Acholeplasma florum)
Length = 206
Score = 39.5 bits (88), Expect = 0.019
Identities = 17/50 (34%), Positives = 30/50 (60%)
Frame = +2
Query: 8 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARG 157
TVP +V G G+ V + PA GTG+++ + ++++AG+ D Y + G
Sbjct: 112 TVPHEVIGHFGAGQVLIKPAKPGTGVIAGGPARAVIELAGIADVYAKSLG 161
>UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2;
Deinococcus|Rep: 30S ribosomal protein S5 - Deinococcus
radiodurans
Length = 196
Score = 39.5 bits (88), Expect = 0.019
Identities = 16/51 (31%), Positives = 31/51 (60%)
Frame = +2
Query: 8 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 160
T+P ++ G+ + V L PA GTG+++ VP+ + ++AG+ + + GS
Sbjct: 86 TIPHEIVGENSTSRVLLKPAGPGTGVIAGTVPRSIAELAGITNMLSKELGS 136
>UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9;
Firmicutes|Rep: 30S ribosomal protein S5 - Mycoplasma
mobile
Length = 243
Score = 38.7 bits (86), Expect = 0.032
Identities = 19/51 (37%), Positives = 31/51 (60%)
Frame = +2
Query: 8 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 160
TVP + K + V L PAP+G GI+++ + ++++AG D YT + GS
Sbjct: 159 TVPHEQWAKFLASKVMLKPAPKGKGIIASNSVRAVVELAGYTDIYTKSYGS 209
>UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1;
Chlamydomonas reinhardtii|Rep: Ribosomal protein S5
precursor - Chlamydomonas reinhardtii
Length = 673
Score = 37.5 bits (83), Expect = 0.075
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +2
Query: 8 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 178
T+P +V K + ++PA GTG+++ + +L++AGVQ+ G L N
Sbjct: 583 TIPHRVEAKFNAARCVMVPAADGTGVLAGSSIRSVLELAGVQNVLAKRIGCRSLLNN 639
>UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 340
Score = 37.1 bits (82), Expect = 0.099
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +2
Query: 8 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 178
T P + G G+ V L PA GTG+++ + +L+MAGV++ S L N
Sbjct: 254 TFPHRADGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQIRSKNALNN 310
>UniRef50_Q2GEC2 Cluster: 30S ribosomal protein S5; n=1;
Neorickettsia sennetsu str. Miyayama|Rep: 30S ribosomal
protein S5 - Neorickettsia sennetsu (strain Miyayama)
Length = 172
Score = 36.7 bits (81), Expect = 0.13
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +2
Query: 32 KCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 163
K G+ + + PAP GTGIV+ +K +M GV D + GS+
Sbjct: 89 KLGASKLFIKPAPEGTGIVAGGAMRKFCEMLGVSDIIAKSYGSS 132
>UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8;
Bacteria|Rep: 30S ribosomal protein S5 - Desulfotalea
psychrophila
Length = 171
Score = 35.9 bits (79), Expect = 0.23
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = +2
Query: 8 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 160
++P +V G G+ V L PA GTG+++ + +L+ AGV + T GS
Sbjct: 85 SIPHQVIGHYGAGRVFLRPASAGTGLIAGGPVRAVLEAAGVSNILTKCLGS 135
>UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein S5 - Opitutaceae
bacterium TAV2
Length = 231
Score = 35.5 bits (78), Expect = 0.30
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = +2
Query: 8 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 160
T+P +V G V L PA GTG+++ + +L+ AGV++ T + GS
Sbjct: 140 TIPHEVFGTHDGGKVLLRPAVTGTGLIAGGAVRAVLEAAGVKNVLTKSMGS 190
>UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiella
natans|Rep: Ribosomal protein rpS5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 219
Score = 35.5 bits (78), Expect = 0.30
Identities = 16/58 (27%), Positives = 33/58 (56%)
Frame = +2
Query: 5 HTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 178
+++P ++ + G+ +V + PA GTG+V+ + +L++AG Q+ G+ L N
Sbjct: 140 YSLPHRLDVEWGAASVMMKPASVGTGLVAGGAVRTILELAGYQNARGKQLGTDNALNN 197
>UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Onion yellows
phytoplasma
Length = 171
Score = 35.5 bits (78), Expect = 0.30
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +2
Query: 8 TVPCKVTGKCGSVTVRLIPAPRGTGIVS-APVPKKLLQMAGVQDCYTSARGS 160
T+P G+ G+ L PA +GTGIV+ + +L++ G+ D T GS
Sbjct: 84 TIPHDTIGRFGASKFFLKPASKGTGIVAGGKAARTILELVGINDVLTKTFGS 135
>UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128;
Bacteria|Rep: 30S ribosomal protein S5 - Mycobacterium
bovis
Length = 220
Score = 35.5 bits (78), Expect = 0.30
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +2
Query: 8 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTL 172
T+ V G+ + V L PA GTG+++ + +L+ AGV D + GS +
Sbjct: 111 TITHPVQGEAAAGVVLLRPASPGTGVIAGGAARAVLECAGVHDILAKSLGSDNAI 165
>UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 181
Score = 35.1 bits (77), Expect = 0.40
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +2
Query: 224 LTPDLWRDIPLTKSPYSEF 280
LTPDLW++ TKSPY EF
Sbjct: 139 LTPDLWKETVFTKSPYQEF 157
>UniRef50_A4S3U8 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 148
Score = 34.7 bits (76), Expect = 0.53
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +2
Query: 5 HTVPCKVTGK-CGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 160
HT+ +V GK C ++ V ++PAP G GIV+ + + +AG+++ GS
Sbjct: 69 HTIYHEVRGKYCKTICV-MLPAPSGDGIVANDTVEAICTLAGIKNIKAKIHGS 120
>UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40;
Bacteria|Rep: 30S ribosomal protein S5 - Bifidobacterium
longum
Length = 233
Score = 34.7 bits (76), Expect = 0.53
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +2
Query: 8 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 160
T+ V G + TV L PA GTG+++ + +++ AG+ D T + GS
Sbjct: 114 TITHPVQGHDAAGTVLLRPAAPGTGVIAGGSVRAVMECAGITDVLTKSMGS 164
>UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n=3;
cellular organisms|Rep: Chloroplast 30S ribosomal
protein S5 - Thalassiosira pseudonana (Marine diatom)
Length = 179
Score = 34.7 bits (76), Expect = 0.53
Identities = 14/57 (24%), Positives = 31/57 (54%)
Frame = +2
Query: 8 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 178
++P V G G+ + + P+ G+G+++ + +L++AG+++ GS L N
Sbjct: 96 SIPHAVIGDLGACKIIMRPSIEGSGVIAGGAVRTVLEVAGIKNVIAKQLGSDNLLNN 152
>UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellular
organisms|Rep: 30S ribosomal protein S5 - Synechocystis
sp. (strain PCC 6803)
Length = 173
Score = 34.3 bits (75), Expect = 0.70
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +2
Query: 29 GKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 178
G G V + PA GTG+++ + +L++AGV++ GS L N
Sbjct: 94 GVSGGAKVVVRPAAPGTGVIAGGAVRTVLELAGVKNILAKQLGSNNPLNN 143
>UniRef50_Q7MTN0 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 172
Score = 33.9 bits (74), Expect = 0.92
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +2
Query: 8 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 163
T+P + G +V L PA GTG+ + + +L GV D ++GS+
Sbjct: 85 TIPHEQAASYGGASVFLKPATTGTGVKAGGAMRAVLDSVGVTDVLAKSKGSS 136
>UniRef50_Q4FLN5 Cluster: 30S ribosomal protein S5; n=4;
Rickettsiales|Rep: 30S ribosomal protein S5 -
Pelagibacter ubique
Length = 170
Score = 33.1 bits (72), Expect = 1.6
Identities = 15/52 (28%), Positives = 30/52 (57%)
Frame = +2
Query: 8 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 163
T+ V GK G+ + L AP+GTGI++ + + ++ G++D + G++
Sbjct: 81 TIHHDVYGKDGAGKIILRSAPKGTGIIAGGPVRAVCEVLGIKDIVAKSMGTS 132
>UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11;
Bacteria|Rep: 30S ribosomal protein S5 - Nitrosomonas
europaea
Length = 177
Score = 33.1 bits (72), Expect = 1.6
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +2
Query: 8 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 163
T+ V G+ G+ V + PA GTGI++ + + ++ GV + GST
Sbjct: 90 TLHHSVIGRHGAARVYMQPASEGTGIIAGGPMRAIFEVMGVHNILAKCLGST 141
>UniRef50_A6NSE6 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 256
Score = 32.3 bits (70), Expect = 2.8
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -2
Query: 129 TPAI*RSFLGTGADTIPVPRGAGISRTVTEP 37
TP + RS G GA T+P RG+G+ T T P
Sbjct: 142 TPVLSRSLSGIGAVTMPNARGSGLLATFTAP 172
>UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 327
Score = 32.3 bits (70), Expect = 2.8
Identities = 16/47 (34%), Positives = 20/47 (42%)
Frame = +1
Query: 4 THRPLQGHRQVWFRNSPADSCPSWYWYCVCASS*EASSDGWCTGLLH 144
TH P+Q R+ S S YWY E ++GW LLH
Sbjct: 183 THSPMQSDRKGRISQSQIGSSTQRYWYSCSHHIQEGLTNGWYPRLLH 229
>UniRef50_A4QUU0 Cluster: Putative uncharacterized protein; n=2;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 299
Score = 32.3 bits (70), Expect = 2.8
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = -1
Query: 313 FSCYTMTVLDFEL*VWRLSQRDIPPQVRSEVGICLGNGSVCG 188
F+ YT DF + W+LSQ+ +PP RS +G G+ G
Sbjct: 217 FNKYTQAAKDFIVEQWQLSQKSLPP--RSSIGSAQPTGTANG 256
>UniRef50_A2XN57 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 84
Score = 31.9 bits (69), Expect = 3.7
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 224 LTPDLWRDIPLTKSPYSEF 280
LTPD WRD KSP+ E+
Sbjct: 44 LTPDFWRDTKFVKSPFQEY 62
>UniRef50_Q4PBG0 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 375
Score = 31.9 bits (69), Expect = 3.7
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = +2
Query: 8 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 163
TV ++ K G+ V L P P G G+ PV + + G+ D S GST
Sbjct: 264 TVETQLEAKWGASRVVLRPRPAGFGLRVPPVIHAICRSVGITDLSASIYGST 315
>UniRef50_A0CLK5 Cluster: Chromosome undetermined scaffold_20, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_20,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 337
Score = 31.5 bits (68), Expect = 4.9
Identities = 13/50 (26%), Positives = 20/50 (40%)
Frame = +2
Query: 5 HTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSAR 154
HT P +TG+ + + P P G P +L + G+ C R
Sbjct: 234 HTCPIPLTGRFNDAEIEINPRPLGFNAYGNPQIASMLMLTGIHHCSFKVR 283
>UniRef50_Q38AQ9 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma brucei|Rep: Putative uncharacterized protein
- Trypanosoma brucei
Length = 470
Score = 31.1 bits (67), Expect = 6.5
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +1
Query: 112 SSDGWCTGLLHVSSWFNW 165
S DGWC G+ H ++ FNW
Sbjct: 419 SRDGWCAGVRHSNTPFNW 436
>UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellular
organisms|Rep: 30S ribosomal protein S5 - Zymomonas
mobilis
Length = 233
Score = 31.1 bits (67), Expect = 6.5
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +2
Query: 29 GKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 163
G+ G+ V L AP GTGI++ + + + GV D T + G++
Sbjct: 136 GRFGAGLVYLRSAPSGTGIIAGGPMRAIFESLGVADVVTKSVGTS 180
>UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7;
Chlamydiaceae|Rep: 30S ribosomal protein S5 -
Chlamydophila abortus
Length = 165
Score = 31.1 bits (67), Expect = 6.5
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = +2
Query: 8 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTL 172
++P +V + L PA GTGIV+ + +L+MAGV++ + GS +
Sbjct: 83 SIPHEVLVDQDGAQLLLKPAKPGTGIVAGSRIRLILEMAGVKNIVAKSLGSNNPM 137
>UniRef50_Q4S4D0 Cluster: Chromosome 2 SCAF14738, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 2
SCAF14738, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 750
Score = 30.7 bits (66), Expect = 8.6
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +2
Query: 14 PCKVTGKCGSVTVRLIPAPRG-TGIVSAPVPKK 109
P + G + R IPAPRG TG + P PKK
Sbjct: 700 PARAPGTADASKARPIPAPRGTTGTLKKPPPKK 732
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 355,336,470
Number of Sequences: 1657284
Number of extensions: 6967317
Number of successful extensions: 18552
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 18020
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18541
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 13220924981
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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