Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0366
         (367 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42436-10|AAF99899.1|  272|Caenorhabditis elegans Ribosomal prot...   138   8e-34
Z81053-4|CAB02879.1|  418|Caenorhabditis elegans Hypothetical pr...    30   0.58 
Z78063-7|CAB01506.1|  418|Caenorhabditis elegans Hypothetical pr...    30   0.58 
U80447-10|AAB37814.1|  477|Caenorhabditis elegans Hypothetical p...    29   1.0  
Z81545-4|CAB04439.1|  352|Caenorhabditis elegans Hypothetical pr...    26   7.2  
U67954-8|AAB52608.2|  782|Caenorhabditis elegans Sulfate permeas...    26   7.2  
AY954524-1|AAX34432.2|  762|Caenorhabditis elegans anion transpo...    26   7.2  
AY887909-1|AAX34421.1|  782|Caenorhabditis elegans anion transpo...    26   7.2  

>U42436-10|AAF99899.1|  272|Caenorhabditis elegans Ribosomal
           protein, small subunitprotein 2 protein.
          Length = 272

 Score =  138 bits (335), Expect = 8e-34
 Identities = 63/90 (70%), Positives = 69/90 (76%)
 Frame = +2

Query: 2   PHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNF 181
           PHTVPCKVTGKC SV VRLIPAPRGTGIVSAPVPKKLL MAG++DCYT+A+GST TLGNF
Sbjct: 173 PHTVPCKVTGKCASVMVRLIPAPRGTGIVSAPVPKKLLHMAGIEDCYTAAKGSTATLGNF 232

Query: 182 XXXXXXXXXXXXXXLTPDLWRDIPLTKSPY 271
                         LTPDLW++  L KSPY
Sbjct: 233 AKATYAALQRTYSYLTPDLWKEEALEKSPY 262


>Z81053-4|CAB02879.1|  418|Caenorhabditis elegans Hypothetical
           protein E02A10.1 protein.
          Length = 418

 Score = 29.9 bits (64), Expect = 0.58
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = +2

Query: 32  KCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 163
           +C +  V     PRG G+   P   K+ +  G++D Y    GST
Sbjct: 215 ECRNTRVFAQRRPRGFGLTCHPRLIKICEAIGIKDIYVKVEGST 258


>Z78063-7|CAB01506.1|  418|Caenorhabditis elegans Hypothetical
           protein E02A10.1 protein.
          Length = 418

 Score = 29.9 bits (64), Expect = 0.58
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = +2

Query: 32  KCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 163
           +C +  V     PRG G+   P   K+ +  G++D Y    GST
Sbjct: 215 ECRNTRVFAQRRPRGFGLTCHPRLIKICEAIGIKDIYVKVEGST 258


>U80447-10|AAB37814.1|  477|Caenorhabditis elegans Hypothetical
           protein F55F8.9 protein.
          Length = 477

 Score = 29.1 bits (62), Expect = 1.0
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = -1

Query: 124 SHLKKLLRNWRRHNTSTTRGRNQPDCYGTTLAGDL 20
           +H K + +N RR+    +R +N+   YG+TL GDL
Sbjct: 218 THKKIVFKN-RRYGRRISRNQNRFSSYGSTLNGDL 251


>Z81545-4|CAB04439.1|  352|Caenorhabditis elegans Hypothetical
           protein F49H6.4 protein.
          Length = 352

 Score = 26.2 bits (55), Expect = 7.2
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -1

Query: 262 LSQRDIPPQVRSEVGICLGNGSVCGF 185
           LS   IP  ++  VG+ +GNG+VC +
Sbjct: 99  LSWFGIPFTIQLFVGLIIGNGAVCSY 124


>U67954-8|AAB52608.2|  782|Caenorhabditis elegans Sulfate permease
           family protein 3 protein.
          Length = 782

 Score = 26.2 bits (55), Expect = 7.2
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = -1

Query: 145 RVAILYTSHLKKLLRNWRRHNTSTTRGRNQPDCYG 41
           R A ++ S LK   R W+R   S  R +   DC G
Sbjct: 602 RSADIFDSKLKSARRRWKRDQKSENRCKLVIDCDG 636


>AY954524-1|AAX34432.2|  762|Caenorhabditis elegans anion
           transporter SULP-3b protein.
          Length = 762

 Score = 26.2 bits (55), Expect = 7.2
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = -1

Query: 145 RVAILYTSHLKKLLRNWRRHNTSTTRGRNQPDCYG 41
           R A ++ S LK   R W+R   S  R +   DC G
Sbjct: 582 RSADIFDSKLKSARRRWKRDQKSENRCKLVIDCDG 616


>AY887909-1|AAX34421.1|  782|Caenorhabditis elegans anion
           transporter SULP-3a protein.
          Length = 782

 Score = 26.2 bits (55), Expect = 7.2
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = -1

Query: 145 RVAILYTSHLKKLLRNWRRHNTSTTRGRNQPDCYG 41
           R A ++ S LK   R W+R   S  R +   DC G
Sbjct: 602 RSADIFDSKLKSARRRWKRDQKSENRCKLVIDCDG 636


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,073,390
Number of Sequences: 27780
Number of extensions: 162439
Number of successful extensions: 469
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 462
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 469
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 514188384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)