Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0366
         (367 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   2.0  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    22   2.0  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   2.0  
DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.              22   2.6  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    22   2.6  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    21   3.4  
EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate isome...    21   4.6  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    20   8.0  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    20   8.0  

>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 22.2 bits (45), Expect = 2.0
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = +3

Query: 195 TLPLPRHMP 221
           TLPLP+H+P
Sbjct: 503 TLPLPQHLP 511


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 22.2 bits (45), Expect = 2.0
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = +3

Query: 195 TLPLPRHMP 221
           TLPLP+H+P
Sbjct: 418 TLPLPQHLP 426


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 2.0
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = +3

Query: 195 TLPLPRHMP 221
           TLPLP+H+P
Sbjct: 737 TLPLPQHLP 745


>DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.
          Length = 120

 Score = 21.8 bits (44), Expect = 2.6
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = +2

Query: 17  CKVTGKCGSVTVRLIPAPRGT 79
           C + G CG +   +   P+GT
Sbjct: 75  CPICGACGDIAHTVKYCPKGT 95


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 21.8 bits (44), Expect = 2.6
 Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = -3

Query: 164 QLNHELTCSNPVHQPSEEAS*ELAQTQY-QYHE 69
           Q++H++   +P  QP +      AQ Q+ Q HE
Sbjct: 167 QMHHQMHTQHPHMQPQQGQHQSQAQQQHLQAHE 199


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = +3

Query: 204 LPRHMPTSL 230
           LP+H+PTSL
Sbjct: 379 LPKHLPTSL 387


>EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate
           isomerase protein.
          Length = 247

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = -1

Query: 106 LRNWRRHNTSTTRGRNQPDCYGTTLAGDLARD 11
           LRNW   N + T        YG ++    A+D
Sbjct: 187 LRNWFSKNVNQTVAETVRIIYGGSVTAGNAKD 218


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 272 SEFKV*DSHCITTE 313
           SE K  + HC+TTE
Sbjct: 814 SEEKNINDHCVTTE 827


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 4/13 (30%), Positives = 9/13 (69%)
 Frame = +1

Query: 37  WFRNSPADSCPSW 75
           W + +P ++ P+W
Sbjct: 343 WIKGTPQNNVPNW 355


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,353
Number of Sequences: 438
Number of extensions: 1792
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8680350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)