Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0365
         (564 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79694-7|CAB01964.1|  396|Caenorhabditis elegans Hypothetical pr...    29   1.7  
Z69902-12|CAA93771.2|  525|Caenorhabditis elegans Hypothetical p...    28   5.3  
AL033535-2|CAA22132.2|  525|Caenorhabditis elegans Hypothetical ...    28   5.3  
Z81576-5|CAB04646.2| 1696|Caenorhabditis elegans Hypothetical pr...    27   9.3  
Z19555-2|CAA79619.2|  394|Caenorhabditis elegans Hypothetical pr...    27   9.3  

>Z79694-7|CAB01964.1|  396|Caenorhabditis elegans Hypothetical
           protein C15A11.7 protein.
          Length = 396

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = -2

Query: 128 VIPFISIGRFRTRPSDRHTCHHYYDQYFHCRLLII 24
           +IPF+ I  F    + +H   HYY +Y+H  + ++
Sbjct: 58  LIPFVFIHTFWWATAIKHDFFHYYPEYWHMPVTMV 92


>Z69902-12|CAA93771.2|  525|Caenorhabditis elegans Hypothetical
           protein VF13D12L.1 protein.
          Length = 525

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
 Frame = +3

Query: 66  MACVAVTWARPESTYTDKWDNIN--VDEILESNRL 164
           + CV V W      YTD    +N   DEI+ES R+
Sbjct: 228 LECVIVLWTANTERYTDVRQGLNATADEIMESIRV 262


>AL033535-2|CAA22132.2|  525|Caenorhabditis elegans Hypothetical
           protein VF13D12L.1 protein.
          Length = 525

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
 Frame = +3

Query: 66  MACVAVTWARPESTYTDKWDNIN--VDEILESNRL 164
           + CV V W      YTD    +N   DEI+ES R+
Sbjct: 228 LECVIVLWTANTERYTDVRQGLNATADEIMESIRV 262


>Z81576-5|CAB04646.2| 1696|Caenorhabditis elegans Hypothetical protein
            R10E8.6 protein.
          Length = 1696

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = -2

Query: 104  RFRTRPSDRHTCHHYYDQYFHCRLLII 24
            + R R S+ HT   YY Q   CRL II
Sbjct: 1414 KLRIRQSNAHTLFVYYKQPIGCRLDII 1440


>Z19555-2|CAA79619.2|  394|Caenorhabditis elegans Hypothetical
           protein F02A9.4b protein.
          Length = 394

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
 Frame = +3

Query: 366 PDNIYQA--RYKDKIDAVKGSA*NEA*MHILARGSN*NCSFNDVVLVK 503
           PDN+ +A  RY++ +DA  G +  +   H  +RGS    SF  +V  K
Sbjct: 342 PDNLIEAVLRYRNVVDAEVGKSYTKRLRHKFSRGSLAKRSFRYLVKPK 389


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,333,766
Number of Sequences: 27780
Number of extensions: 230627
Number of successful extensions: 590
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 585
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 590
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1166125180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)