Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0365
         (564 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g55800.1 68418.m06954 DC1 domain-containing protein contains ...    30   1.2  
At4g27010.1 68417.m03885 expressed protein  ; expression support...    30   1.2  
At5g17230.1 68418.m02019 phytoene synthase (PSY) / geranylgerany...    29   2.8  
At4g32920.1 68417.m04685 glycine-rich protein                          28   3.7  
At5g19660.1 68418.m02339 subtilase family protein contains Pfam ...    28   5.0  
At3g02600.1 68416.m00251 phosphatidic acid phosphatase family pr...    28   5.0  
At2g46750.1 68415.m05833 FAD-binding domain-containing protein l...    27   6.5  
At2g20020.1 68415.m02340 expressed protein                             27   8.7  

>At5g55800.1 68418.m06954 DC1 domain-containing protein contains
           Pfam profile PF03107: DC1 domain
          Length = 578

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 15/45 (33%), Positives = 27/45 (60%), Gaps = 5/45 (11%)
 Frame = -2

Query: 122 PFISIGRFRTRPSDRHT--CHHYYDQ-YFHCRL--LIIYPVSTLR 3
           PF S+ R  + P  ++   CHHY++  ++HC    LI++P+  +R
Sbjct: 130 PFHSL-RLTSSPQSQNCICCHHYFNDIFYHCSTCKLIMHPICAMR 173


>At4g27010.1 68417.m03885 expressed protein  ; expression supported
           by MPSS
          Length = 2535

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +3

Query: 216 GKALKETLPDALEHECVKCTGKQKSGADKVIRHLVNKRPDLWKELAVKYD 365
           G+ L E   D +  E     GKQ+S A  ++  +V + P +  E+A K+D
Sbjct: 120 GRLLVEEKLDDIYKELNSKEGKQQSAALSLLASIVRRGPGMASEIAKKFD 169


>At5g17230.1 68418.m02019 phytoene synthase (PSY) /
           geranylgeranyl-diphosphate geranylgeranyl transferase
           identical to GB:L25812; synonymous with
           geranylgeranyl-diphosphate geranylgeranyl transferase
          Length = 422

 Score = 28.7 bits (61), Expect = 2.8
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = +3

Query: 75  VAVTWARPESTYTDKWDNINVDEILESNRLLKGYVDCLLGKGR 203
           VAV W    S   D  +N  +  +LES+RL     +  L KG+
Sbjct: 5   VAVLWVATSSLNPDPMNNCGLVRVLESSRLFSPCQNQRLNKGK 47


>At4g32920.1 68417.m04685 glycine-rich protein 
          Length = 1432

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = +3

Query: 171 GYVDCLLGKGRCTPDGKALKETLPDALEHECVKCTGKQKSGADKVIRHL 317
           G ++  +G G  T  GKA  E L      EC   T K  +G+DK + HL
Sbjct: 777 GIIEDNIG-GNGTLTGKACPEGLYGLFCEECPSGTYKNVTGSDKALCHL 824


>At5g19660.1 68418.m02339 subtilase family protein contains Pfam
           profile: PF00082 subtilase family
          Length = 1038

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
 Frame = +3

Query: 54  IIVVMACVAVTWARPESTYTDKWDNINVDEI--LESNRLLK 170
           IIVV   V++ W RP STY  +  N+N + +  LES    K
Sbjct: 16  IIVVFLSVSLFWLRP-STYHPQQQNLNPENVTRLESENETK 55


>At3g02600.1 68416.m00251 phosphatidic acid phosphatase family
           protein / PAP2 family protein similar to phosphatidic
           acid phosphatase [Mus musculus] GI:1487873; contains
           Pfam profile: PF01569 phosphatase PAP2 superfamily
          Length = 364

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = +3

Query: 201 RCTPDGKALKETLPDALEH 257
           RC PDGKAL ++L D + H
Sbjct: 181 RCFPDGKALYDSLGDVICH 199


>At2g46750.1 68415.m05833 FAD-binding domain-containing protein low
           similarity to SP|P58710 L-gulonolactone oxidase (EC
           1.1.3.8) {Mus musculus}; contains Pfam profile PF01565:
           FAD binding domain
          Length = 591

 Score = 27.5 bits (58), Expect = 6.5
 Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = +3

Query: 276 GKQKSGA-DKVIRHLVNKRPDLWKELAVKYDPDNIYQARYKDKIDAVKGSA 425
           GK ++ A D VIR   N  P   K +   YDP  ++ + + D+I  +KG+A
Sbjct: 492 GKNRNLAFDGVIRKY-NNAPAFLK-VKDSYDPKGLFSSEWTDQILGIKGNA 540


>At2g20020.1 68415.m02340 expressed protein
          Length = 701

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 14/47 (29%), Positives = 22/47 (46%)
 Frame = +3

Query: 216 GKALKETLPDALEHECVKCTGKQKSGADKVIRHLVNKRPDLWKELAV 356
           G+ L +     L   C+K T +   G D +  +++N   DLWK   V
Sbjct: 240 GEPLTKEEVRELVTSCLKTTRQLNMGRDGLTHNMLNNIHDLWKRRRV 286


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,695,458
Number of Sequences: 28952
Number of extensions: 214185
Number of successful extensions: 553
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 541
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 553
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1082538160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)